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Predicting the primary infection source of Escherichia coli bacteremia using virulence-associated genes.
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- European Journal of Clinical Microbiology & Infectious Diseases, 2024, v. 43, n. 4, p. 641, doi. 10.1007/s10096-024-04754-6
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- Article
Gonorrhoea on the rise in Denmark since 2022: distinct clones drive increase in heterosexual individuals.
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- Eurosurveillance (15607917), 2024, v. 29, n. 7, p. 1, doi. 10.2807/1560-7917.ES.2024.29.7.2400059
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- Article
The impact of acute SARS‐CoV‐2 on testicular function including insulin‐like factor 3 (INSL3) in men with mild COVID‐19: A longitudinal study.
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- Andrology, 2024, v. 12, n. 2, p. 437, doi. 10.1111/andr.13494
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- Article
Long-term carriage and evolution of vancomycin-resistant Enterococcus faecium: a genomic study on consecutive isolates.
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- JAC-Antimicrobial Resistance, 2024, v. 6, n. 1, p. 1, doi. 10.1093/jacamr/dlad153
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- Article
Within-host genomic evolution of methicillin-resistant Staphylococcus aureus in long-term carriers.
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- Applied Microbiology & Biotechnology, 2024, v. 108, n. 1, p. 1, doi. 10.1007/s00253-023-12932-3
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- Article
Within-host genomic evolution of methicillin-resistant Staphylococcus aureus in long-term carriers.
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- Applied Microbiology & Biotechnology, 2024, v. 108, n. 1, p. 1, doi. 10.1007/s00253-023-12932-3
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- Article
Diarrhoea‐causing microorganisms are rare in adult patients undergoing diagnostic laparoscopy for suspected appendicitis: a prospective observational cohort study.
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- APMIS, 2023, v. 131, n. 6, p. 284, doi. 10.1111/apm.13311
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Whole genome sequencing reveals two genetically distinct MRSA outbreaks among people who inject drugs and homeless people in Copenhagen.
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- APMIS, 2023, v. 131, n. 6, p. 294, doi. 10.1111/apm.13318
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- Article
SARS‐CoV‐2 spike mRNA vaccine sequences circulate in blood up to 28 days after COVID‐19 vaccination.
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- APMIS, 2023, v. 131, n. 3, p. 128, doi. 10.1111/apm.13294
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- Article
Emergence of circulating influenza A H3N2 viruses with genetic drift in the matrix gene: be alert of false‐negative test results.
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- APMIS, 2022, v. 130, n. 10, p. 612, doi. 10.1111/apm.13262
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A randomized, placebo-controlled, double-blinded trial of MRSA throat carriage treatment, with either standard decolonization alone or in combination with oral clindamycin.
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- 2022
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- journal article
One Day in Denmark: Comparison of Phenotypic and Genotypic Antimicrobial Susceptibility Testing in Bacterial Isolates From Clinical Settings.
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- Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.804627
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The use of core genome multilocus sequence typing to determine the duration of vancomycin‐resistant Enterococcus faecium outbreaks.
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- APMIS, 2022, v. 130, n. 6, p. 323, doi. 10.1111/apm.13216
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- Article
One Day in Denmark: Nationwide point-prevalence survey of human bacterial isolates and comparison of classical and whole-genome sequence-based species identification methods.
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- PLoS ONE, 2022, v. 17, n. 2, p. 1, doi. 10.1371/journal.pone.0261999
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- Article
Genomic analysis of 600 vancomycin-resistant Enterococcus faecium reveals a high prevalence of ST80 and spread of similar vanA regions via IS1216E and plasmid transfer in diverse genetic lineages in Ireland.
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- 2022
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- journal article
Danish Whole-Genome-Sequenced Candida albicans and Candida glabrata Samples Fit into Globally Prevalent Clades.
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- Journal of Fungi, 2021, v. 7, n. 11, p. 1, doi. 10.3390/jof7110962
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Evaluation of the Hologic Panther Fusion MRSA Assay for the detection of MRSA in ESwab specimens obtained from nose, throat, and perineum.
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- European Journal of Clinical Microbiology & Infectious Diseases, 2021, v. 40, n. 10, p. 2177, doi. 10.1007/s10096-021-04272-9
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- Article
Investigation of the introduction and dissemination of vanB Enterococcus faecium in the Capital Region of Denmark and development of a rapid and accurate clone-specific vanB E. faecium PCR.
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- 2021
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- journal article
Staphylococcus saprophyticus From Clinical and Environmental Origins Have Distinct Biofilm Composition.
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- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.663768
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- Article
Rapid Open-Source SNP-Based Clustering Offers an Alternative to Core Genome MLST for Outbreak Tracing in a Hospital Setting.
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- Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.636608
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Foodborne Origin and Local and Global Spread of Staphylococcus saprophyticus Causing Human Urinary Tract Infections.
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- 2021
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- journal article
Prevalence of MRSA nasal carriage among pregnant women in Copenhagen.
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- PLoS ONE, 2021, v. 16, n. 1, p. 1, doi. 10.1371/journal.pone.0246343
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- Article
Sex-associated Risk Factors for Co-infection with Chlamydia trachomatis and Neisseria gonorrhoea among Patients Presenting to a Sexually Transmitted Infection Clinic.
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- Acta Dermato-Venereologica, 2021, v. 101, n. 1, p. 1, doi. 10.2340/00015555-3721
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- Article
Association between vancomycin-resistant Enterococcus faecium colonization and subsequent infection: a retrospective WGS study.
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- 2020
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- journal article
Sensitivity, specificity, inclusivity and exclusivity of the updated Aptima Combo 2 assay, which provides detection coverage of the new diagnostic-escape Chlamydia trachomatis variants.
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- 2020
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- journal article
A Chlamydia trachomatis 23S rRNA G1523A variant escaping detection in the Aptima Combo 2 assay (Hologic) was widespread across Denmark in July–September 2019.
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- APMIS, 2020, v. 128, n. 6, p. 440, doi. 10.1111/apm.13043
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Resistance to piperacillin/tazobactam in Escherichia coli resulting from extensive IS26-associated gene amplification of blaTEM-1.
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- 2019
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- journal article
Surveillance of vancomycin-resistant enterococci reveals shift in dominating clones and national spread of a vancomycin-variable vanA Enterococcus faecium ST1421-CT1134 clone, Denmark, 2015 to March 2019.
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- Eurosurveillance (15607917), 2019, v. 24, n. 34, p. 2, doi. 10.2807/1560-7917.ES.2019.24.34.1900503
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- Article
WGS of 1058 Enterococcus faecium from Copenhagen, Denmark, reveals rapid clonal expansion of vancomycin-resistant clone ST80 combined with widespread dissemination of a vanA-containing plasmid and acquisition of a heterogeneous accessory genome.
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- 2019
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- journal article
Ceftriaxone-resistant Salmonella enterica serotype Typhi in a pregnant traveller returning from Karachi, Pakistan to Denmark, 2019.
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- Eurosurveillance (15607917), 2019, v. 24, n. 21, p. 8, doi. 10.2807/1560-7917.ES.2019.24.21.1900289
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- Article
Eradicating MRSA carriage: the impact of throat carriage and Panton-Valentine leukocidin genes on success rates.
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- European Journal of Clinical Microbiology & Infectious Diseases, 2019, v. 38, n. 4, p. 683, doi. 10.1007/s10096-019-03474-6
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Emergence of a vancomycin-variable Enterococcus faecium ST1421 strain containing a deletion in vanX.
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- 2018
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- journal article
Evolution of the β-lactam-resistant Streptococcus pneumoniae PMEN3 clone over a 30 year period in Barcelona, Spain.
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- 2018
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- journal article
European external quality assessments for identification, molecular typing and characterization of Staphylococcus aureus.
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- 2018
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- journal article
A Sporadic Four-Year Hospital Outbreak of a ST97-IVa MRSA With Half of the Patients First Identified in the Community.
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- Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.01494
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Use of a Regression Model to Study Host-Genomic Determinants of Phage Susceptibility in MRSA.
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- Antibiotics (2079-6382), 2018, v. 7, n. 1, p. 9, doi. 10.3390/antibiotics7010009
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Pelvic inflammatory disease risk following negative results from chlamydia nucleic acid amplification tests (NAATs) versus non-NAATs in Denmark: A retrospective cohort.
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- 2018
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- journal article
RUCS: rapid identification of PCR primers for unique core sequences.
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- Bioinformatics, 2017, v. 33, n. 24, p. 3917, doi. 10.1093/bioinformatics/btx526
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- Article
Multidrug-resistant Neisseria gonorrhoeae infection with ceftriaxone resistance and intermediate resistance to azithromycin, Denmark, 2017.
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- Eurosurveillance (15607917), 2017, v. 22, n. 42, p. 6, doi. 10.2807/1560-7917.ES.2017.22.42.17-00659
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- Article
Whole Genome Sequencing of Danish Staphylococcus argenteus Reveals a Genetically Diverse Collection with Clear Separation from Staphylococcus aureus.
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- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01512
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Genome-wide-analyses of Listeria monocytogenes from food-processing plants reveal clonal diversity and date the emergence of persisting sequence types.
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- Environmental Microbiology Reports, 2017, v. 9, n. 4, p. 428, doi. 10.1111/1758-2229.12552
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- Article
Emergence of vanA Enterococcus faecium in Denmark, 2005-15.
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- 2017
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- journal article
Methicillin-resistant Staphylococcus aureus emerged long before the introduction of methicillin into clinical practice.
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- Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-017-1252-9
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Evidence for the evolutionary steps leading to mecA-mediated β-lactam resistance in staphylococci.
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- PLoS Genetics, 2017, v. 13, n. 4, p. 1, doi. 10.1371/journal.pgen.1006674
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Comparison of the population excess fraction of Chlamydia trachomatis infection on pelvic inflammatory disease at 12-months in the presence and absence of chlamydia testing and treatment: Systematic review and retrospective cohort analysis.
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- PLoS ONE, 2017, v. 12, n. 2, p. 1, doi. 10.1371/journal.pone.0171551
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Staphylococcal aureus Enterotoxin C and Enterotoxin-Like L Associated with Post-partum Mastitis.
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- Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00173
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Determination of Elizabethkingia Diversity by MALDI-TOF Mass Spectrometry and Whole-Genome Sequencing.
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- 2017
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- journal article
Genomic analysis of 495 vancomycin-resistant Enterococcus faecium reveals broad dissemination of a vanA plasmid in more than 19 clones from Copenhagen, Denmark.
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- 2017
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- journal article
Novel Pathways for Ameliorating the Fitness Cost of Gentamicin Resistant Small Colony Variants.
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- Frontiers in Microbiology, 2016, v. 7, p. 1, doi. 10.3389/fmicb.2016.01866
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Evidence for Human Adaptation and Foodborne Transmission of Livestock- Associated Methicillin-Resistant Staphylococcus aureus.
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- Clinical Infectious Diseases, 2016, v. 63, n. 10, p. 1349, doi. 10.1093/cid/ciw532
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- Article