Works by Westerfield, Monte

Results: 39

Linking Human Diseases to Animal Models Using Ontology-Based Phenotype Annotation.

Published in:

PLoS Biology, 2009, v. 7, n. 11, p. 1, doi. 10.1371/journal.pbio.1000247

By:

Washington, Nicole L.;
Haendel, Melissa A.;
Mungall, Christopher J.;
Ashburner, Michael;
Westerfield, Monte;
Lewis, Suzanna E.

Publication type:

Article

Pathway selection by growth cones of identified motoneurones in live zebra fish embryos.

Published in:

Nature, 1986, v. 320, n. 6059, p. 269, doi. 10.1038/320269a0

By:

Eisen, Judith S.;
Myers, Paul Z.;
Westerfield, Monte

Publication type:

Article

The zebrafish anatomy and stage ontologies: representing the anatomy and development of Danio rerio.

Published in:

Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-12

By:

Van Slyke, Ceri E.;
Bradford, Yvonne M.;
Westerfield, Monte;
Haendel, Melissa A.

Publication type:

Article

The vertebrate taxonomy ontology: a framework for reasoning across model organism and species phenotypes.

Published in:

Journal of Biomedical Semantics, 2013, v. 4, n. 1, p. 3, doi. 10.1186/2041-1480-4-34

By:

Midford, Peter E.;
Dececchi, Thomas Alex;
Balhoff, James P.;
Dahdul, Wasila M.;
Ibrahim, Nizar;
Lapp, Hilmar;
Lundberg, John G.;
Mabee, Paula M.;
Sereno, Paul C.;
Westerfield, Monte;
Vision, Todd J.;
Blackburn, David C.

Publication type:

Article

Secondary motoneuron axons localize DM-GRASP on their fasciculated segments.

Published in:

Journal of Comparative Neurology, 1999, v. 406, n. 3, p. 415, doi. 10.1002/(SICI)1096-9861(19990412)406:3<415::AID-CNE9>3.0.CO;2-2

By:

Fashena, David;
Westerfield, Monte

Publication type:

Article

The Zebrafish Information Network: the zebrafish model organism database.

Published in:

Nucleic Acids Research, 2006, v. 34, n. suppl 1, p. d581, doi. 10.1093/nar/gkj086

By:

Sprague, Judy;
Bayraktaroglu, Leyla;
Clements, Dave;
Conlin, Tom;
Fashena, David;
Frazer, Ken;
Haendel, Melissa;
Howe, Douglas G.;
Mani, Prita;
Ramachandran, Sridhar;
Schaper, Kevin;
Segerdell, Erik;
Song, Peiran;
Sprunger, Brock;
Taylor, Sierra;
Van Slyke, Ceri E.;
Westerfield, Monte

Publication type:

Article

The Zebrafish Information Network (ZFIN): the zebrafish model organism database.

Published in:

Nucleic Acids Research, 2003, v. 31, n. 1, p. 241, doi. 10.1093/nar/gkg027

By:

Sprague, Judy;
Clements, Dave;
Conlin, Tom;
Edwards, Pat;
Frazer, Ken;
Schaper, Kevin;
Segerdell, Erik;
Song, Peiran;
Sprunger, Brock;
Westerfield, Monte

Publication type:

Article

Early expression of acetylcholinesterase activity in functionally distinct neurons of the zebrafish.

Published in:

Journal of Comparative Neurology, 1989, v. 284, n. 3, p. 350, doi. 10.1002/cne.902840303

By:

Hanneman, Eric;
Westerfield, Monte

Publication type:

Article

Zebrafish VEGF Receptors: A Guideline to Nomenclature.

Published in:

PLoS Genetics, 2008, v. 4, n. 5, p. 1, doi. 10.1371/journal.pgen.1000064

By:

Bussmann, Jeroen;
Lawson, Nathan;
Zon, Leonard;
Schulte-Merker, Stefan;
Ekker, Marc;
Mullins, Mary;
Postlethwait, John;
Westerfield, Monte

Publication type:

Article

PDZD7 is a modifier of retinal disease and a contributor to digenic Usher syndrome.

Published in:

2010

By:

Ebermann, Inga;
Phillips, Jennifer B.;
Liebau, Max C.;
Koenekoop, Robert K.;
Schermer, Bernhard;
Lopez, Irma;
Schäfer, Ellen;
Roux, Anne-Francoise;
Dafinger, Claudia;
Bernd, Antje;
Zrenner, Eberhart;
Claustres, Mireille;
Blanco, Bernardo;
Nürnberg, Gudrun;
Nürnberg, Peter;
Ruland, Rebecca;
Westerfield, Monte;
Benzing, Thomas;
olz, Hanno J.J;
Schäfer, Ellen

Publication type:

journal article

Emx3 is required for the differentiation of dorsal telencephalic neurons.

Published in:

Developmental Dynamics, 2009, v. 238, n. 8, p. 1984, doi. 10.1002/dvdy.22031

By:

Viktorin, Gudrun;
Chiuchitu, Christina;
Rissler, Michael;
Varga, Zoltán M.;
Westerfield, Monte

Publication type:

Article

Zebrafish as a model for caveolin-associated muscle disease; caveolin-3 is required for myofibril organization and muscle cell patterning.

Published in:

Human Molecular Genetics, 2005, v. 14, n. 13, p. 1727, doi. 10.1093/hmg/ddi179

By:

Nixon, Susan J.;
Wegner, Jeremy;
Ferguson, Charles;
Méry, Pierre-François;
Hancock, John F.;
Currie, Peter D.;
Key, Brian;
Westerfield, Monte;
Parton, Robert G.

Publication type:

Article

Ubr3, a Novel Modulator of Hh Signaling Affects the Degradation of Costal-2 and Kif7 through Poly-ubiquitination.

Published in:

PLoS Genetics, 2016, v. 12, n. 5, p. 1, doi. 10.1371/journal.pgen.1006054

By:

Li, Tongchao;
Fan, Junkai;
Blanco-Sánchez, Bernardo;
Giagtzoglou, Nikolaos;
Lin, Guang;
Yamamoto, Shinya;
Jaiswal, Manish;
Chen, Kuchuan;
Zhang, Jie;
Wei, Wei;
Lewis, Michael T.;
Groves, Andrew K.;
Westerfield, Monte;
Jia, Jianhang;
Bellen, Hugo J.

Publication type:

Article

Phenoscape: Identifying Candidate Genes for Evolutionary Phenotypes.

Published in:

Molecular Biology & Evolution, 2016, v. 33, n. 1, p. 13, doi. 10.1093/molbev/msv223

By:

Edmunds, Richard C.;
Baofeng Su;
Balhoff, James P.;
Eames, B. Frank;
Dahdul, Wasila M.;
Lapp, Hilmar;
Lundberg, John G.;
Vision, Todd J.;
Dunham, Rex A.;
Mabee, Paula M.;
Westerfield, Monte

Publication type:

Article

The Zebrafish Information Network (ZFIN): a resource for genetic, genomic and developmental research.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 1, p. 87, doi. 10.1093/nar/29.1.87

By:

Sprague, Judy;
Douglas, Eckehard Doerry, Sarah;
Westerfield, Monte

Publication type:

Article

Lbx2 regulates formation of myofibrils.

Published in:

BMC Developmental Biology, 2009, v. 9, p. 1, doi. 10.1186/1471-213X-9-13

By:

Ochi, Haruki;
Westerfield, Monte

Publication type:

Article

Fgf-dependent otic induction requires competence provided by Foxi1 and Dlx3b.

Published in:

BMC Developmental Biology, 2007, v. 7, p. 5, doi. 10.1186/1471-213X-7-5

By:

Hans, Stefan;
Christison, Joe;
Dong Liu;
Westerfield, Monte

Publication type:

Article

Multiple upstream modules regulate zebrafish myf5 expression.

Published in:

BMC Developmental Biology, 2007, v. 7, p. 1, doi. 10.1186/1471-213X-7-1

By:

Yau-Hung Chen;
Yun-Hsin Wang;
Min-Yen Chang;
Cheng-Yung Lin;
Chih-Wei Weng;
Westerfield, Monte;
Huai-Jen Tsai

Publication type:

Article

A small population of anterior cells patterns the forebrain during zebrafish gastrulation.

Published in:

Nature, 1998, v. 391, n. 6669, p. 788, doi. 10.1038/35853

By:

Houart, Corinne;
Westerfield, Monte;
Wilson, Stephen W.

Publication type:

Article

The Zebrafish Information Network: new support for non-coding genes, richer Gene Ontology annotations and the Alliance of Genome Resources.

Published in:

Nucleic Acids Research, 2019, v. 47, n. D1, p. D867, doi. 10.1093/nar/gky1090

By:

Ruzicka, Leyla;
Howe, Douglas G;
Ramachandran, Sridhar;
Toro, Sabrina;
Van Slyke, Ceri E;
Bradford, Yvonne M;
Eagle, Anne;
Fashena, David;
Frazer, Ken;
Kalita, Patrick;
Mani, Prita;
Martin, Ryan;
Moxon, Sierra Taylor;
Paddock, Holly;
Pich, Christian;
Schaper, Kevin;
Shao, Xiang;
Singer, Amy;
Westerfield, Monte

Publication type:

Article

The Zebrafish Model Organism Database: new support for human disease models, mutation details, gene expression phenotypes and searching.

Published in:

Nucleic Acids Research, 2017, v. 45, n. D1, p. D758, doi. 10.1093/nar/gkw1116

By:

Howe, Douglas G.;
Bradford, Yvonne M.;
Eagle, Anne;
Fashena, David;
Frazer, Ken;
Kalita, Patrick;
Mani, Prita;
Martin, Ryan;
Moxon, Sierra Taylor;
Paddock, Holly;
Pich, Christian;
Ramachandran, Sridhar;
Ruzicka, Leyla;
Schaper, Kevin;
Xiang Shao;
Singer, Amy;
Toro, Sabrina;
Van Slyke, Ceri;
Westerfield, Monte

Publication type:

Article

An exploration of functional domains in the zebrafish ortholog of human Usher syndrome gene USH2A.

Published in:

FASEB Journal, 2013, v. 27, p. 573.1, doi. 10.1096/fasebj.27.1_supplement.573.1

By:

Drake, Rachel Rae;
Phillips, Jennifer;
Westerfield, Monte

Publication type:

Article

An altered intron inhibits synthesis of the acetylcholine receptor ...-subunit in the paralyzed...

Published in:

Genetics, 1998, v. 148, n. 1, p. 361, doi. 10.1093/genetics/148.1.361

By:

Sepich, Diane S.;
Wegner, Jeremy;
O'Shea, Sherry;
Westerfield, Monte

Publication type:

Article

Identification of selected gamma-ray induced deficiencies in zebrafish using multiplex...

Published in:

Genetics, 1996, v. 144, n. 4, p. 1735, doi. 10.1093/genetics/144.4.1735

By:

Fritz, Andreas;
Rozowski, Marion;
Walker, Charline;
Westerfield, Monte

Publication type:

Article

PhenoDigm: analyzing curated annotations to associate animal models with human diseases.

Published in:

Database: The Journal of Biological Databases & Curation, 2013, v. 2013, p. 1, doi. 10.1093/database/bat025

By:

Smedley, Damian;
Oellrich, Anika;
Köhler, Sebastian;
Ruef, Barbara;
Genetics Project, Sanger Mouse;
Westerfield, Monte;
Robinson, Peter;
Lewis, Suzanna;
Mungall, Christopher

Publication type:

Article

A Unified Anatomy Ontology of the Vertebrate Skeletal System.

Published in:

PLoS ONE, 2012, v. 7, n. 12, p. 1, doi. 10.1371/journal.pone.0051070

By:

Dahdul, Wasila M.;
Balhoff, James P.;
Blackburn, David C.;
Diehl, Alexander D.;
Haendel, Melissa A.;
Hall, Brian K.;
Lapp, Hilmar;
Lundberg, John G.;
Mungall, Christopher J.;
Ringwald, Martin;
Segerdell, Erik;
Van Slyke, Ceri E.;
Vickaryous, Matthew K.;
Westerfield, Monte;
Mabee, Paula M.

Publication type:

Article

Dcc Regulates Asymmetric Outgrowth of Forebrain Neurons in Zebrafish.

Published in:

PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0036516

By:

Jingxia Gao;
Changwen Zhang;
Bin Yang;
Liu Sun;
Cuizhen Zhang;
Monte Westerfield;
Gang Peng

Publication type:

Article

Evolutionary Characters, Phenotypes and Ontologies : Curating Data from the Systematic Biology Literature.

Published in:

PLoS ONE, 2010, v. 5, n. 5, p. 1, doi. 10.1371/journal.pone.0010708

By:

Dahdul, Wasila M.;
Balhoff, James P.;
Engeman, Jeffrey;
Grande, Terry;
Hilton, Eric J.;
Kothari, Cartik;
Lapp, Hilmar;
Lundberg, John G.;
Midford, Peter E.;
Vision, Todd J.;
Westerfield, Monte;
Mabee, Paula M.

Publication type:

Article

Phenex: Ontological Annotation of Phenotypic Diversity.

Published in:

PLoS ONE, 2010, v. 5, n. 5, p. 1, doi. 10.1371/journal.pone.0010500

By:

Balhoff, James P.;
Dahdul, Wasila M.;
Kothari, Cartik R.;
Lapp, Hilmar;
Lundberg, John G.;
Mabee, Paula;
Midford, Peter E.;
Westerfield, Monte;
Vision, Todd J.

Publication type:

Article

The Teleost Anatomy Ontology: Anatomical Representation for the Genomics Age.

Published in:

Systematic Biology, 2010, v. 59, n. 4, p. 369, doi. 10.1093/sysbio/syq013

By:

DAHDUL, WASILA M.;
LUNDBERG, JOHN G.;
MIDFORD, PETER E.;
BALHOFF, JAMES P.;
LAPP, HILMAR;
VISION, TODD J.;
HAENDEL, MELISSA A.;
WESTERFIELD, MONTE;
MABEE, PAULA M.

Publication type:

Article

ZFIN updates to support zebrafish environmental exposure data.

Published in:

Genetics, 2025, v. 229, n. 3, p. 1, doi. 10.1093/genetics/iyaf021

By:

Bradford, Yvonne M;
Slyke, Ceri E Van;
Muyskens, Jonathan B;
Tseng, Wei-Chia;
Howe, Douglas G;
Fashena, David;
Martin, Ryan;
Paddock, Holly;
Pich, Christian;
Ramachandran, Sridhar;
Ruzicka, Leyla;
Singer, Amy;
Taylor, Ryan;
Westerfield, Monte

Publication type:

Article

From multiallele fish to nonstandard environments, how ZFIN assigns phenotypes, human disease models, and gene expression annotations to genes.

Published in:

Genetics, 2023, v. 224, n. 1, p. 1, doi. 10.1093/genetics/iyad032

By:

Bradford, Yvonne M.;
Van Slyke, Ceri E.;
Howe, Douglas G.;
Fashena, David;
Frazer, Ken;
Martin, Ryan;
Paddock, Holly;
Pich, Christian;
Ramachandran, Sridhar;
Ruzicka, Leyla;
Singer, Amy;
Taylor, Ryan;
Wei-Chia Tseng;
Westerfield, Monte

Publication type:

Article

Zebrafish information network, the knowledgebase for Danio rerio research.

Published in:

Genetics, 2022, v. 220, n. 4, p. 1, doi. 10.1093/genetics/iyac016

By:

Bradford, Yvonne M.;
Van Slyke, Ceri E.;
Ruzicka, Leyla;
Singer, Amy;
Eagle, Anne;
Fashena, David;
Howe, Douglas G.;
Frazer, Ken;
Martin, Ryan;
Paddock, Holly;
Pich, Christian;
Ramachandran, Sridhar;
Westerfield, Monte

Publication type:

Article

A fish with no sex: gonadal and adrenal functions partition between zebrafish NR5A1 co-orthologs.

Published in:

Genetics, 2021, v. 217, n. 2, p. 1, doi. 10.1093/genetics/iyaa030

By:

Yan, Yi-Lin;
Titus, Tom;
Desvignes, Thomas;
BreMiller, Ruth;
Batzel, Peter;
Sydes, Jason;
Farnsworth, Dylan;
Dillon, Danielle;
Wegner, Jeremy;
Phillips, Jennifer B.;
Peirce, Judy;
Dowd, John;
Network, Undiagnosed Diseases;
Buck, Charles Loren;
Miller, Adam;
Westerfield, Monte;
Postlethwait, John H.

Publication type:

Article

Model Organisms Facilitate Rare Disease Diagnosis and Therapeutic Research.

Published in:

Genetics, 2017, v. 207, n. 1, p. 9, doi. 10.1534/genetics.117.203067

By:

Wangler, Michael F.;
Yamamoto, Shinya;
Hsiao-Tuan Chao;
Posey, Jennifer E.;
Westerfield, Monte;
Postlethwait, John;
Hieter, Philip;
Boycott, Kym M.;
Campeau, Philippe M.;
Bellen, Hugo J.

Publication type:

Article

Signaling networks that regulate muscle development: Lessons from zebrafish.

Published in:

Development, Growth & Differentiation, 2007, v. 49, n. 1, p. 1, doi. 10.1111/j.1440-169X.2007.00905.x

By:

Ochi, Haruki;
Westerfield, Monte

Publication type:

Article

ZFIN, The zebrafish model organism database: Updates and new directions.

Published in:

Genesis: The Journal of Genetics & Development, 2015, v. 53, n. 8, p. 498, doi. 10.1002/dvg.22868

By:

Ruzicka, Leyla;
Bradford, Yvonne M.;
Frazer, Ken;
Howe, Douglas G.;
Paddock, Holly;
Ramachandran, Sridhar;
Singer, Amy;
Toro, Sabrina;
Van Slyke, Ceri E.;
Eagle, Anne E.;
Fashena, David;
Kalita, Patrick;
Knight, Jonathan;
Mani, Prita;
Martin, Ryan;
Moxon, Sierra A.T.;
Pich, Christian;
Schaper, Kevin;
Shao, Xiang;
Westerfield, Monte

Publication type:

Article

Model organism databases.

Published in:

2015

By:

Vize, Peter D;
Westerfield, Monte

Publication type:

Editorial

Non-manifesting AHI1 truncations indicate localized loss-of-function tolerance in a severe Mendelian disease gene.

Published in:

Human Molecular Genetics, 2015, v. 24, n. 9, p. 2594, doi. 10.1093/hmg/ddv022

By:

Elsayed, Solaf M.;
Phillips, Jennifer B.;
Heller, Raoul;
Thoenes, Michaela;
Elsobky, Ezzat;
Nürnberg, Gudrun;
Nürnberg, Peter;
Seland, Saskia;
Ebermann, Inga;
Altmüller, Janine;
Thiele, Holger;
Toliat, Mohammad;
Körber, Friederike;
Xue-Jia Hu;
Wu, Yun-Dong;
Zaki, Maha S.;
Abdel-Salam, Ghada;
Gleeson, Joseph;
Boltshauser, Eugen;
Westerfield, Monte

Publication type:

Article