Works by Wendel, Jonathan F.

Results: 155

Parallel and Intertwining Threads of Domestication in Allopolyploid Cotton.

Published in:

Advanced Science, 2021, v. 8, n. 10, p. 1, doi. 10.1002/advs.202003634

By:

Yuan, Daojun;
Grover, Corrinne E.;
Hu, Guanjing;
Pan, Mengqiao;
Miller, Emma R.;
Conover, Justin L.;
Hunt, Spencer P.;
Udall, Joshua A.;
Wendel, Jonathan F.

Publication type:

Article

Parallel and Intertwining Threads of Domestication in Allopolyploid Cotton.

Published in:

Advanced Science, 2021, v. 8, n. 10, p. 1, doi. 10.1002/advs.202003634

By:

Yuan, Daojun;
Grover, Corrinne E.;
Hu, Guanjing;
Pan, Mengqiao;
Miller, Emma R.;
Conover, Justin L.;
Hunt, Spencer P.;
Udall, Joshua A.;
Wendel, Jonathan F.

Publication type:

Article

Genetic mapping and comparative analysis of seven mutants related to seed fiber development in cotton.

Published in:

Theoretical & Applied Genetics, 2005, v. 111, n. 6, p. 1137, doi. 10.1007/s00122-005-0041-0

By:

Junkang Rong;
Pierce, Gary J.;
Waghmare, Vijay N.;
Rogers, Carl J.;
Desai, Aparna;
Chee, Peng W.;
May, O. Lloyd;
Gannaway, John R.;
Wendel, Jonathan F.;
Wilkins, Thea A.;
Paterson, Andrew H.

Publication type:

Article

Genetic mapping of a cross between Gossypium hirsutum (cotton) and the Hawaiian endemic, Gossypium tomentosum.

Published in:

Theoretical & Applied Genetics, 2005, v. 111, n. 4, p. 665, doi. 10.1007/s00122-005-2032-6

By:

Waghmare, Vijay N.;
Rong, Junkang;
Rogers, Carl J.;
Pierce, Gary J.;
Wendel, Jonathan F.;
Paterson, Andrew H.

Publication type:

Article

Genomic rearrangements and evolutionary changes in 3D chromatin topologies in the cotton tribe (Gossypieae).

Published in:

BMC Biology, 2023, v. 21, n. 1, p. 1, doi. 10.1186/s12915-023-01560-y

By:

Li, Xiaochong;
Wang, Jinbin;
Yu, Yanan;
Li, Guo;
Wang, Jinpeng;
Li, Changping;
Zeng, Zixian;
Li, Ning;
Zhang, Zhibin;
Dong, Qianli;
Yu, Yiyang;
Wang, Xiaofei;
Wang, Tianya;
Grover, Corrinne E.;
Wang, Bin;
Liu, Bao;
Wendel, Jonathan F.;
Gong, Lei

Publication type:

Article

Tobacco genomes quickly go up in smoke.

Published in:

New Phytologist, 2007, v. 175, n. 4, p. 599, doi. 10.1111/j.1469-8137.2007.02197.x

By:

Grover, Corrinne E.;
Hawkins, Jennifer S.;
Wendel, Jonathan F.

Publication type:

Article

Epigenetics and plant evolution.

Published in:

New Phytologist, 2005, v. 168, n. 1, p. 81, doi. 10.1111/j.1469-8137.2005.01491.x

By:

Rapp, Ryan A.;
Wendel, Jonathan F.

Publication type:

Article

Cryptic trysts, genomic mergers, and plant speciation.

Published in:

New Phytologist, 2004, v. 161, n. 1, p. 133, doi. 10.1111/j.1469-8137.2004.00947.x

By:

Cronn, Richard;
Wendel, Jonathan F.

Publication type:

Article

A Calmodulin-Like Gene (GbCML7) for Fiber Strength and Yield Improvement Identified by Resequencing Core Accessions of a Pedigree in Gossypium barbadense.

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2021.815648

By:

Zhao, Nan;
Wang, Weiran;
Jiang, Kaiyun;
Grover, Corrinne E.;
Cheng, Cheng;
Pan, Zhuanxia;
Zhao, Cunpeng;
Zhu, Jiahui;
Li, Dan;
Wang, Meng;
Xiao, Li;
Yang, Jing;
Ning, Xinmin;
Li, Bin;
Xu, Haijiang;
Su, Ying;
Aierxi, Alifu;
Li, Pengbo;
Guo, Baosheng;
Wendel, Jonathan F.

Publication type:

Article

Embryogenic Calli Induction and Salt Stress Response Revealed by RNA-Seq in Diploid Wild Species Gossypium sturtianum and Gossypium raimondii.

Published in:

Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.715041

By:

Nie, Hushuai;
Wang, Yali;
Wei, Chengcheng;
Grover, Corrinne E.;
Su, Ying;
Wendel, Jonathan F.;
Hua, Jinping

Publication type:

Article

The wondrous cycles of polyploidy in plants.

Published in:

2015

By:

Wendel, Jonathan F.

Publication type:

Essay

DOUBLING DOWN ON GENOMES: POLYPLOIDY AND CROP PLANTS.

Published in:

American Journal of Botany, 2014, v. 101, n. 10, p. 1711, doi. 10.3732/ajb.1400119

By:

Renny‐Byfield, Simon;
Wendel, Jonathan F.

Publication type:

Article

TARGETED SEQUENCE CAPTURE AS A POWERFUL TOOL FOR EVOLUTIONARY ANALYSIS.

Published in:

American Journal of Botany, 2012, v. 99, n. 2, p. 312, doi. 10.3732/ajb.1100323

By:

Grover, Corrinne E.;
Salmon, Armel;
Wendel, Jonathan F.

Publication type:

Article

PHYLOGENETIC, MORPHOLOGICAL, AND CHEMOTAXONOMIC INCONGRUENCE IN THE NORTH AMERICAN ENDEMIC GENUS ECHINACEA.

Published in:

American Journal of Botany, 2008, v. 95, n. 6, p. 756, doi. 10.3732/ajb.0800049

By:

Flagel, Lex E.;
Rapp, Ryan A.;
Grover, Corrinne E.;
Widrlechner, Mark P.;
Hawkins, Jennifer;
Grafenberg, Jessie L.;
Álvarez, Inés;
Gyu Young Chung;
Wendel, Jonathan F.

Publication type:

Article

TRADE-OFFS AMONG ANTI-HERBIVORE RESISTANCE TRAITS: INSIGHTS FROM GOSSYPIEAE (MALVACEAE).

Published in:

American Journal of Botany, 2004, v. 91, n. 6, p. 871, doi. 10.3732/ajb.91.6.871

By:

Rudgers, Jennifer A.;
Strauss, Sharon Y.;
Wendel, Jonathan F.

Publication type:

Article

PHYLOGENETIC RELATIONSHIPS IN GLEDITSIA (LEGUMINOSAE) BASED ON ITS SEQUENCES.

Published in:

American Journal of Botany, 2003, v. 90, n. 2, p. 310, doi. 10.3732/ajb.90.2.310

By:

Schnabel, Andrew;
McDonel, Patrick E.;
Wendel, Jonathan F.

Publication type:

Article

RAPID DIVERSIFICATION OF THE COTTON GENUS (GOSSYPIUM: MALVACEAE) REVEALED BY ANALYSIS OF SIXTEEN NUCLEAR AND CHLOROPLAST GENES.

Published in:

American Journal of Botany, 2002, v. 89, n. 4, p. 707, doi. 10.3732/ajb.89.4.707

By:

Cronn, Richard C.;
Small, Randall L.;
Haselkorn, Tamara;
Wendel, Jonathan F.

Publication type:

Article

Cladistic Biogeography of Gleditsia (Leguminosae) Based on NDHF and RPL16 Chloroplast Gene...

Published in:

American Journal of Botany, 1998, v. 85, n. 12, p. 1753, doi. 10.2307/2446510

By:

Schnabel, Andrew;
Wendel, Jonathan F.

Publication type:

Article

Weedy adaptation in Setaria spp. II. Genetic diversity and population genetic structure...

Published in:

American Journal of Botany, 1995, v. 82, n. 8, p. 1031, doi. 10.2307/2446233

By:

Rong-Lin Wang;
Wendel, Jonathan F.

Publication type:

Article

Weedy adaptation in Setaria spp. I. Isozyme analysis of genetic diversity and population genetic...

Published in:

American Journal of Botany, 1995, v. 82, n. 3, p. 308, doi. 10.2307/2445576

By:

Rong-Lin Wang;
Wendel, Jonathan F.

Publication type:

Article

Reevaluating the origin of domesticated cotton (Gossypium hirsutum; Malvaceae) using nuclear...

Published in:

American Journal of Botany, 1994, v. 81, n. 10, p. 1309, doi. 10.1002/j.1537-2197.1994.tb11453.x

By:

Brubaker, Curt L.;
Wendel, Jonathan F.

Publication type:

Article

The significance of allozyme variation and introgression in the Liriodendron tulipifera complex...

Published in:

American Journal of Botany, 1994, v. 81, n. 7, p. 878, doi. 10.2307/2445769

By:

Parks, Clifford R.;
Wendel, Jonathan F.

Publication type:

Article

Bidirectional cytoplasmic and nuclear introgression in the New World cottons Gossypium barbadense and G. Hirsutum (Malvaceae).

Published in:

American Journal of Botany, 1993, v. 80, n. 10, p. 1203, doi. 10.1002/j.1537-2197.1993.tb15353.x

By:

Brubaker, Curt L.;
Koontz, Jason A.;
Wendel, Jonathan F.

Publication type:

Article

Dual Domestication, Diversity, and Differential Introgression in Old World Cotton Diploids.

Published in:

Genome Biology & Evolution, 2022, v. 14, n. 12, p. 1, doi. 10.1093/gbe/evac170

By:

Grover, Corrinne E;
Arick, Mark A;
Thrash, Adam;
Sharbrough, Joel;
Hu, Guanjing;
Yuan, Daojun;
Snodgrass, Samantha;
Miller, Emma R;
Ramaraj, Thiruvarangan;
Peterson, Daniel G;
Udall, Joshua A;
Wendel, Jonathan F

Publication type:

Article

Insights into the Evolution of the New World Diploid Cottons (Gossypium, Subgenus Houzingenia) Based on Genome Sequencing.

Published in:

Genome Biology & Evolution, 2019, v. 11, n. 1, p. 53, doi. 10.1093/gbe/evy256

By:

Grover, Corrinne E;
Arick, Mark A;
Thrash, Adam;
Conover, Justin L;
Sanders, William S;
Peterson, Daniel G;
Frelichowski, James E;
Scheffler, Jodi A;
Scheffler, Brian E;
Wendel, Jonathan F

Publication type:

Article

Comparative Genomics of an Unusual Biogeographic Disjunction in the Cotton Tribe (Gossypieae) Yields Insights into Genome Downsizing.

Published in:

Genome Biology & Evolution, 2017, v. 9, n. 12, p. 3328, doi. 10.1093/gbe/evx248

By:

Grover, Corrinne E.;
Arick II, Mark A.;
Conover, Justin L.;
Thrash, Adam;
Guanjing Hu;
Sanders, William S.;
Chuan-Yu Hsu;
Naqvi, Rubab Zahra;
Farooq, Muhammad;
Xiaochong Li;
Lei Gong;
Mudge, Joann;
Ramaraj, Thiruvarangan;
Udall, Joshua A.;
Peterson, Daniel G.;
Wendel, Jonathan F.

Publication type:

Article

Evolutionary Conservation and Divergence of Gene Coexpression Networks in Gossypium (Cotton) Seeds.

Published in:

Genome Biology & Evolution, 2016, v. 8, n. 12, p. 3765, doi. 10.1093/gbe/evw280

By:

Guanjing Hu;
Hovav, Ran;
Grover, Corrinne E.;
Faigenboim-Doron, Adi;
Kadmon, Noa;
Page, Justin T.;
Udall, Joshua A.;
Wendel, Jonathan F.

Publication type:

Article

Independent Domestication of Two Old World Cotton Species.

Published in:

Genome Biology & Evolution, 2016, v. 8, n. 6, p. 1940, doi. 10.1093/gbe/evw129

By:

Renny-Byfield, Simon;
Page, Justin T.;
Udall, Joshua A.;
Sanders, William S.;
Peterson, Daniel G.;
Arick II, Mark A.;
Grover, Corrinne E.;
Wendel, Jonathan F.

Publication type:

Article

Ancient Gene Duplicates in Gossypium (Cotton) Exhibit Near-Complete Expression Divergence.

Published in:

Genome Biology & Evolution, 2014, v. 6, n. 3, p. 559, doi. 10.1093/gbe/evu037

By:

Renny-Byfield, Simon;
Gallagher, Joseph P.;
Grover, Corrinne E.;
Szadkowski, Emmanuel;
Page, Justin T.;
Udall, Joshua A.;
Wang, Xiyin;
Paterson, Andrew H.;
Wendel, Jonathan F.

Publication type:

Article

Composition and Expression of Conserved MicroRNA Genes in Diploid Cotton (Gossypium) Species.

Published in:

Genome Biology & Evolution, 2013, v. 5, n. 12, p. 2449, doi. 10.1093/gbe/evt196

By:

Gong, Lei;
Kakrana, Atul;
Arikit, Siwaret;
Meyers, Blake C.;
Wendel, Jonathan F.

Publication type:

Article

Rapid evolutionary divergence of Gossypium barbadense and G. hirsutum mitochondrial genomes.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-1988-0

By:

Mingyong Tang;
Zhiwen Chen;
Corrinne E. Grover;
Yumei Wang;
Shuangshuang Li;
Guozheng Liu;
Zhiying Ma;
Wendel, Jonathan F.;
Jinping Hua

Publication type:

Article

Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 302, doi. 10.1186/1471-2164-13-302

By:

Flagel, Lex E.;
Wendel, Jonathan F.;
Udall, Joshua A.

Publication type:

Article

Gene expression in developing fibres of Upland cotton (Gossypium hirsutum L.) was massively altered by domestication.

Published in:

BMC Biology, 2010, v. 8, p. 139, doi. 10.1186/1741-7007-8-139

By:

Rapp, Ryan A.;
Haigler, Candace H.;
Flagel, Lex;
Hovav, Ran H.;
Udall, Joshua A.;
Wendel, Jonathan F.

Publication type:

Article

Genomic expression dominance in allopolyploids.

Published in:

BMC Biology, 2009, v. 7, p. 1, doi. 10.1186/1741-7007-7-18

By:

Rapp, Ryan A.;
Udall, Joshua A.;
Wendel, Jonathan F.

Publication type:

Article

A majority of cotton genes are expressed in single-celled fiber.

Published in:

Planta: An International Journal of Plant Biology, 2008, v. 227, n. 2, p. 319, doi. 10.1007/s00425-007-0619-7

By:

Hovav, Ran;
Udall, Joshua A.;
Hovav, Einat;
Rapp, Ryan;
Flagel, Lex;
Wendel, Jonathan F.

Publication type:

Article

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.

Published in:

Nature, 2012, v. 492, n. 7429, p. 423, doi. 10.1038/nature11798

By:

Paterson, Andrew H.;
Wendel, Jonathan F.;
Gundlach, Heidrun;
Guo, Hui;
Jenkins, Jerry;
Jin, Dianchuan;
Llewellyn, Danny;
Showmaker, Kurtis C.;
Shu, Shengqiang;
Udall, Joshua;
Yoo, Mi-jeong;
Byers, Robert;
Chen, Wei;
Doron-Faigenboim, Adi;
Duke, Mary V.;
Gong, Lei;
Grimwood, Jane;
Grover, Corrinne;
Grupp, Kara;
Hu, Guanjing

Publication type:

Article

Evolution of the BBAA Component of Bread Wheat during Its History at the Allohexaploid Level.

Published in:

Plant Cell, 2014, v. 26, n. 7, p. 2761, doi. 10.1105/tpc.114.128439

By:

Zhang, Huakun;
Zhu, Bo;
Qi, Bao;
Gou, Xiaowan;
Dong, Yuzhu;
Xu, Chunming;
Zhang, Bangjiao;
Huang, Wei;
Liu, Chang;
Wang, Xutong;
Yang, Chunwu;
Zhou, Hao;
Kashkush, Khalil;
Feldman, Moshe;
Wendel, Jonathan F.;
Liu, Bao

Publication type:

Article

Daily glycome and transcriptome profiling reveals polysaccharide structures and correlated glycosyltransferases critical for cotton fiber growth.

Published in:

Plant Journal, 2024, v. 120, n. 5, p. 1857, doi. 10.1111/tpj.17084

By:

Swaminathan, Sivakumar;
Grover, Corrinne E.;
Mugisha, Alither S.;
Sichterman, Lauren E.;
Lee, Youngwoo;
Yang, Pengcheng;
Mallery, Eileen L.;
Jareczek, Josef J.;
Leach, Alexis G.;
Xie, Jun;
Wendel, Jonathan F.;
Szymanski, Daniel B.;
Zabotina, Olga A.

Publication type:

Article

Cytonuclear interplay in auto‐ and allopolyploids: a multifaceted perspective from the Festuca‐Lolium complex.

Published in:

Plant Journal, 2024, v. 118, n. 4, p. 1102, doi. 10.1111/tpj.16659

By:

Shahbazi, Mehrdad;
Majka, Joanna;
Kubíková, Denisa;
Zwierzykowski, Zbigniew;
Glombik, Marek;
Wendel, Jonathan F.;
Sharbrough, Joel;
Hartmann, Stephan;
Szecówka, Marek;
Doležel, Jaroslav;
Bartoš, Jan;
Kopecký, David;
Kneřová, Jana

Publication type:

Article

Parental legacy versus regulatory innovation in salt stress responsiveness of allopolyploid cotton (Gossypium) species.

Published in:

Plant Journal, 2022, v. 111, n. 3, p. 872, doi. 10.1111/tpj.15863

By:

Dong, Yating;
Hu, Guanjing;
Grover, Corrinne E.;
Miller, Emma R.;
Zhu, Shuijin;
Wendel, Jonathan F.

Publication type:

Article

Evolution of plant genome architecture.

Published in:

Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-0908-1

By:

Wendel, Jonathan F.;
Jackson, Scott A.;
Meyers, Blake C.;
Wing, Rod A.

Publication type:

Article

Little evidence for homoeologous gene conversion and homoeologous exchange events in Gossypium allopolyploids.

Published in:

American Journal of Botany, 2024, v. 111, n. 8, p. 1, doi. 10.1002/ajb2.16386

By:

Conover, Justin L.;
Grover, Corrinne E.;
Sharbrough, Joel;
Sloan, Daniel B.;
Peterson, Daniel G.;
Wendel, Jonathan F.

Publication type:

Article

Chloroplast DNA Structural Variation, Phylogeny, and Age of Divergence among Diploid Cotton Species.

Published in:

PLoS ONE, 2016, v. 11, n. 6, p. 1, doi. 10.1371/journal.pone.0157183

By:

Chen, Zhiwen;
Feng, Kun;
Grover, Corrinne E.;
Li, Pengbo;
Liu, Fang;
Wang, Yumei;
Xu, Qin;
Shang, Mingzhao;
Zhou, Zhongli;
Cai, Xiaoyan;
Wang, Xingxing;
Wendel, Jonathan F.;
Wang, Kunbo;
Hua, Jinping

Publication type:

Article

Evolutionary Dynamics of Chromatin Structure and Duplicate Gene Expression in Diploid and Allopolyploid Cotton.

Published in:

Molecular Biology & Evolution, 2024, v. 41, n. 5, p. 1, doi. 10.1093/molbev/msae095

By:

Hu, Guanjing;
Grover, Corrinne E;
Vera, Daniel L;
Lung, Pei-Yau;
Girimurugan, Senthil B;
Miller, Emma R;
Conover, Justin L;
Ou, Shujun;
Xiong, Xianpeng;
Zhu, De;
Li, Dongming;
Gallagher, Joseph P;
Udall, Joshua A;
Sui, Xin;
Zhang, Jinfeng;
Bass, Hank W;
Wendel, Jonathan F

Publication type:

Article

Compensatory Genetic and Transcriptional Cytonuclear Coordination in Allopolyploid Lager Yeast (Saccharomyces pastorianus).

Published in:

Molecular Biology & Evolution, 2022, v. 39, n. 11, p. 1, doi. 10.1093/molbev/msac228

By:

Zhang, Keren;
Li, Juzuo;
Li, Guo;
Zhao, Yue;
Dong, Yuefan;
Zhang, Ying;
Sun, Wenqing;
Wang, Junsheng;
Yao, Jinyang;
Ma, Yiqiao;
Wang, Hongyan;
Zhang, Zhibin;
Wang, Tianya;
Xie, Kun;
Wendel, Jonathan F;
Liu, Bao;
Gong, Lei

Publication type:

Article

Global Patterns of Subgenome Evolution in Organelle-Targeted Genes of Six Allotetraploid Angiosperms.

Published in:

Molecular Biology & Evolution, 2022, v. 39, n. 4, p. 1, doi. 10.1093/molbev/msac074

By:

Sharbrough, Joel;
Conover, Justin L.;
Gyorfy, Matheus Fernandes;
Grover, Corrinne E.;
Miller, Emma R.;
Wendel, Jonathan F.;
Sloan, Daniel B.

Publication type:

Article

Deleterious Mutations Accumulate Faster in Allopolyploid Than Diploid Cotton (Gossypium) and Unequally between Subgenomes.

Published in:

Molecular Biology & Evolution, 2022, v. 39, n. 2, p. 1, doi. 10.1093/molbev/msac024

By:

Conover, Justin L;
Wendel, Jonathan F

Publication type:

Article

Comparative Genome Analyses Highlight Transposon-Mediated Genome Expansion and the Evolutionary Architecture of 3D Genomic Folding in Cotton.

Published in:

Molecular Biology & Evolution, 2021, v. 38, n. 9, p. 3621, doi. 10.1093/molbev/msab128

By:

Wang, Maojun;
Li, Jianying;
Wang, Pengcheng;
Liu, Fang;
Liu, Zhenping;
Zhao, Guannan;
Xu, Zhongping;
Pei, Liuling;
Grover, Corrinne E;
Wendel, Jonathan F;
Wang, Kunbo;
Zhang, Xianlong

Publication type:

Article

Coevolution in Hybrid Genomes: Nuclear-Encoded Rubisco Small Subunits and Their Plastid-Targeting Translocons Accompanying Sequential Allopolyploidy Events in Triticum.

Published in:

Molecular Biology & Evolution, 2020, v. 37, n. 12, p. 3409, doi. 10.1093/molbev/msaa158

By:

Li, Changping;
Wang, Xiaofei;
Xiao, Yaxian;
Sun, Xuhan;
Wang, Jinbin;
Yang, Xuan;
Sun, Yuchen;
Sha, Yan;
Lv, Ruili;
Yu, Yanan;
Ding, Baoxu;
Zhang, Zhibin;
Li, Ning;
Wang, Tianya;
Wendel, Jonathan F;
Liu, Bao;
Gong, Lei

Publication type:

Article

Cytonuclear Coevolution following Homoploid Hybrid Speciation in Aegilops tauschii.

Published in:

Molecular Biology & Evolution, 2019, v. 36, n. 2, p. 341, doi. 10.1093/molbev/msy215

By:

Li, Changping;
Sun, Xuhan;
Conover, Justin L;
Zhang, Zhibin;
Wang, Jinbin;
Wang, Xiaofei;
Deng, Xin;
Wang, Hongyan;
Liu, Bao;
Wendel, Jonathan F;
Gong, Lei

Publication type:

Article