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Evaluating somatic tumor mutation detection without matched normal samples.
Published in:
Human Genomics, 2017, v. 11, p. 1, doi. 10.1186/s40246-017-0118-2
By:
- Teer, Jamie K.;
- Yonghong Zhang;
- Lu Chen;
- Welsh, Eric A.;
- Douglas Cress, W.;
- Eschrich, Steven A.;
- Berglund, Anders E.
Publication type:
Article
RELIGIOSITY AND DEPRESSION IN INTERCOLLEGIATE ATHLETES.
Published in:
College Student Journal, 2002, v. 36, n. 4, p. 526
By:
- Storch, Eric A.;
- Storch, Jason B.;
- Welsh, Eric;
- Okun, Aubree
Publication type:
Article
General O-glycosylation of 2-furfuryl alcohol using β-glucuronidase.
Published in:
Biotechnology & Bioengineering, 2002, v. 80, n. 2, p. 222, doi. 10.1002/bit.10365
By:
- Martin, Brett D.;
- Welsh, Eric R.;
- Mastrangelo, Jonathan C.;
- Aggarwal, Renu
Publication type:
Article
Intrinsic radiosensitivity, genomic-based radiation dose and patterns of failure of penile cancer in response to adjuvant radiation therapy.
Published in:
Reports of Practical Oncology & Radiotherapy, 2019, v. 24, n. 6, p. 593, doi. 10.1016/j.rpor.2019.09.006
By:
- Yuan, Zhigang;
- Grass, G.Daniel;
- Azizi, Mounsif;
- Ahmed, Kamran A.;
- Yoder, G. Sean J.;
- Welsh, Eric A.;
- Fulp, William J.;
- Dhillon, Jasreman;
- Torres-Roca, Javier F.;
- Giuliano, Anna R.;
- Spiess, Philippe E.;
- Johnstone, Peter A.
Publication type:
Article
A Pilot Proteogenomic Study with Data Integration Identifies MCT1 and GLUT1 as Prognostic Markers in Lung Adenocarcinoma.
Published in:
PLoS ONE, 2015, v. 10, n. 10, p. 1, doi. 10.1371/journal.pone.0142162
By:
- Stewart, Paul A.;
- Parapatics, Katja;
- Welsh, Eric A.;
- Müller, André C.;
- Cao, Haoyun;
- Fang, Bin;
- Koomen, John M.;
- Eschrich, Steven A.;
- Bennett, Keiryn L.;
- Haura, Eric B.
Publication type:
Article
Diurnal Rhythms Result in Significant Changes in the Cellular Protein Complement in the Cyanobacterium Cyanothece 51142.
Published in:
PLoS ONE, 2011, v. 6, n. 2, p. 1, doi. 10.1371/journal.pone.0016680
By:
- Stöckel, Jana;
- Jacobs, Jon M.;
- Elvitigala, Thanura R.;
- Liberton, Michelle;
- Welsh, Eric A.;
- Polpitiya, Ashoka D.;
- Gritsenko, Marina A.;
- Nicora, Carrie D.;
- Koppenaal, David W.;
- Smith, Richard D.;
- Pakrasi, Himadri B.
Publication type:
Article
ProVal: A protein-scoring function for the selection of native and near-native folds.
Published in:
Proteins, 2004, v. 54, n. 2, p. 289
By:
- Anders Berglund;
- Richard D. Head;
- Eric A. Welsh;
- Garland R. Marshall
Publication type:
Article
Relative protein quantification and accessible biology in lung tumor proteomes from four LC-MS/MS discovery platforms.
Published in:
Proteomics, 2017, v. 17, n. 6, p. n/a, doi. 10.1002/pmic.201600300
By:
- Stewart, Paul A.;
- Fang, Bin;
- Slebos, Robbert J. C.;
- Zhang, Guolin;
- Borne, Adam L.;
- Fellows, Katherine;
- Teer, Jamie K.;
- Chen, Y. Ann;
- Welsh, Eric;
- Eschrich, Steven A.;
- Haura, Eric B.;
- Koomen, John M.
Publication type:
Article
Pharmacokinetics and pharmacodynamics of five distinct commercially available hemp-derived topical cannabidiol products.
Published in:
Journal of Analytical Toxicology, 2024, v. 48, n. 2, p. 81, doi. 10.1093/jat/bkae001
By:
- Zamarripa, C Austin;
- Tilton, Hayleigh E;
- Lin, Spencer;
- Cone, Edward J;
- Winecker, Ruth E;
- Flegel, Ronald R;
- Kuntz, David;
- Beals, Melissa;
- Jacques, Martin;
- Clark, Michael;
- Welsh, Eric R;
- Wagner, Lynn;
- Bonn-Miller, Marcel O;
- Vandrey, Ryan;
- Spindle, Tory R
Publication type:
Article
Proteogenomic landscape of squamous cell lung cancer.
Published in:
Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-11452-x
By:
- Stewart, Paul A.;
- Welsh, Eric A.;
- Slebos, Robbert J. C.;
- Fang, Bin;
- Izumi, Victoria;
- Chambers, Matthew;
- Zhang, Guolin;
- Cen, Ling;
- Pettersson, Fredrik;
- Zhang, Yonghong;
- Chen, Zhihua;
- Cheng, Chia-Ho;
- Thapa, Ram;
- Thompson, Zachary;
- Fellows, Katherine M.;
- Francis, Jewel M.;
- Saller, James J.;
- Mesa, Tania;
- Zhang, Chaomei;
- Yoder, Sean
Publication type:
Article
Multi-Omics and Informatics Analysis of FFPE Tissues Derived from Melanoma Patients with Long/Short Responses to Anti-PD1 Therapy Reveals Pathways of Response.
Published in:
Cancers, 2020, v. 12, n. 12, p. 3515, doi. 10.3390/cancers12123515
By:
- Garg, Saurabh K.;
- Welsh, Eric A.;
- Fang, Bin;
- Hernandez, Yuliana I.;
- Rose, Trevor;
- Gray, Jhanelle;
- Koomen, John M.;
- Berglund, Anders;
- Mulé, James J.;
- Markowitz, Joseph
Publication type:
Article
Multiplex transcriptional analysis of paraffin-embedded liver needle biopsy from patients with liver fibrosis.
Published in:
Fibrogenesis & Tissue Repair, 2012, v. 5, n. 1, p. 1, doi. 10.1186/1755-1536-5-21
By:
- Staten, Nicholas R;
- Welsh, Eric A;
- Sidik, Kurex;
- McDonald, Sandra A;
- Dufield, Dawn R;
- Maqsodi, Botoul;
- Ma, Yunqing;
- McMaster, Gary K;
- Mathews, Rodney W;
- Arch, Robert H;
- Masferrer, Jaime L;
- Souberbielle, Bernard E
Publication type:
Article
Metabolomics of primary cutaneous melanoma and matched adjacent extratumoral microenvironment.
Published in:
PLoS ONE, 2020, v. 15, n. 10, p. 1, doi. 10.1371/journal.pone.0240849
By:
- Taylor, Nicholas J.;
- Gaynanova, Irina;
- Eschrich, Steven A.;
- Welsh, Eric A.;
- Garrett, Timothy J.;
- Beecher, Chris;
- Sharma, Ritin;
- Koomen, John M.;
- Smalley, Keiran S. M.;
- Messina, Jane L.;
- Kanetsky, Peter A.
Publication type:
Article
Iterative rank-order normalization of gene expression microarray data.
Published in:
BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-153
By:
- Welsh, Eric A.;
- Eschrich, Steven A.;
- Berglund, Anders E.;
- Fenstermacher, David A.
Publication type:
Article
The radiosensitivity of brain metastases based upon primary histology utilizing a multigene index of tumor radiosensitivity.
Published in:
Neuro-Oncology, 2017, v. 19, n. 8, p. 1145, doi. 10.1093/neuonc/nox043
By:
- Ahmed, Kamran A.;
- Berglund, Anders E.;
- Welsh, Eric A.;
- Naghavi, Arash O.;
- Kim, Youngchul;
- Michael Yu;
- Robinson, Timothy J.;
- Eschrich, Steven A.;
- Johnstone, Peter A. S.;
- Torres-Roca, Javier F.
Publication type:
Article
Lowering Sample Requirements to Study Tyrosine Kinase Signaling Using Phosphoproteomics with the TMT Calibrator Approach.
Published in:
Proteomics, 2020, v. 20, n. 24, p. 1, doi. 10.1002/pmic.202000116
By:
- Fang, Bin;
- Izumi, Victoria;
- Rix, Lily L. Remsing;
- Welsh, Eric;
- Pike, Ian;
- Reuther, Gary W.;
- Haura, Eric B.;
- Rix, Uwe;
- Koomen, John M.
Publication type:
Article
Activity-Based Proteomics Reveals Heterogeneous Kinome and ATP-Binding Proteome Responses to MEK Inhibition in KRAS Mutant Lung Cancer.
Published in:
Proteomes, 2016, v. 4, n. 2, p. 16, doi. 10.3390/proteomes4020016
By:
- Kim, Jae-Young;
- Stewart, Paul A.;
- Borne, Adam L.;
- Fang, Bin;
- Welsh, Eric A.;
- Chen, Yian Ann;
- Eschrich, Steven A.;
- Koomen, John M.;
- Haura, Eric B.
Publication type:
Article
Characteristics and Validation Techniques for PCA-Based Gene-Expression Signatures.
Published in:
International Journal of Genomics, 2017, p. 1, doi. 10.1155/2017/2354564
By:
- Berglund, Anders E.;
- Welsh, Eric A.;
- Eschrich, Steven A.
Publication type:
Article
Overexpression of major CDKN3 transcripts is associated with poor survival in lung adenocarcinoma.
Published in:
2015
By:
- Fan, Chao;
- Chen, Lu;
- Huang, Qingling;
- Shen, Tao;
- Welsh, Eric A;
- Teer, Jamie K;
- Cai, Jianfeng;
- Cress, W Douglas;
- Wu, Jie
Publication type:
journal article
IGF-binding proteins secreted by cancer-associated fibroblasts induce context-dependent drug sensitization of lung cancer cells.
Published in:
Science Signaling, 2022, v. 15, n. 747, p. 1, doi. 10.1126/scisignal.abj5879
By:
- Remsing Rix, Lily L.;
- Sumi, Natalia J.;
- Hu, Qianqian;
- Desai, Bina;
- Bryant, Annamarie T.;
- Li, Xueli;
- Welsh, Eric A.;
- Fang, Bin;
- Kinose, Fumi;
- Kuenzi, Brent M.;
- Chen, Y. Ann;
- Antonia, Scott J.;
- Lovly, Christine M.;
- Koomen, John M.;
- Haura, Eric B.;
- Marusyk, Andriy;
- Rix, Uwe
Publication type:
Article
Drepmel—A Multi-Omics Melanoma Drug Repurposing Resource for Prioritizing Drug Combinations and Understanding Tumor Microenvironment.
Published in:
Cells (2073-4409), 2022, v. 11, n. 18, p. N.PAG, doi. 10.3390/cells11182894
By:
- Thompson, Zachary J.;
- Teer, Jamie K.;
- Li, Jiannong;
- Chen, Zhihua;
- Welsh, Eric A.;
- Zhang, Yonghong;
- Ayoubi, Noura;
- Eroglu, Zeynep;
- Tan, Aik Choon;
- Smalley, Keiran S. M.;
- Chen, Yian Ann
Publication type:
Article
Characterization of two potentially universal turn motifs that shape the repeated five-residues fold-Crystal structure of a lumenal pentapeptide repeat protein from Cyanothece 51142.
Published in:
Protein Science: A Publication of the Protein Society, 2006, v. 15, n. 11, p. 2579, doi. 10.1110/ps.062407506
By:
- Buchko, Garry W.;
- Ni, Shuisong;
- Robinson, Howard;
- Welsh, Eric A.;
- Pakrasi, Himadri B.;
- Kennedy, Michael A.
Publication type:
Article
Intrinsic Religiosity and Substance Use in Intercollegiate Athletes.
Published in:
Journal of Sport & Exercise Psychology, 2003, v. 25, n. 2, p. 248, doi. 10.1123/jsep.25.2.248
By:
- Storch, Eric A.;
- Storch, Jason B.;
- Kovacs, Adrienne H.;
- Okun, Aubree;
- Welsh, Eric
Publication type:
Article
GMSimpute: a generalized two-step Lasso approach to impute missing values in label-free mass spectrum analysis.
Published in:
Bioinformatics, 2020, v. 36, n. 1, p. 257, doi. 10.1093/bioinformatics/btz488
By:
- Li, Qian;
- Fisher, Kate;
- Meng, Wenjun;
- Fang, Bin;
- Welsh, Eric;
- Haura, Eric B;
- Koomen, John M;
- Eschrich, Steven A;
- Fridley, Brooke L;
- Chen, Y Ann
Publication type:
Article
Role of LKB1-CRTC1 on glycosylated COX-2 and response to COX-2 inhibition in lung cancer.
Published in:
2015
By:
- Cao, Chunxia;
- Gao, Ruli;
- Zhang, Min;
- Amelio, Antonio L;
- Fallahi, Mohammad;
- Chen, Zirong;
- Gu, Yumei;
- Hu, Chengbin;
- Welsh, Eric A;
- Engel, Brienne E;
- Haura, Eric B;
- Cress, W Douglas;
- Wu, Lizi;
- Zajac-Kaye, Maria;
- Kaye, Frederic J
Publication type:
journal article
Role of LKB1-CRTC1 on Glycosylated COX-2 and Response to COX-2 Inhibition in Lung Cancer.
Published in:
JNCI: Journal of the National Cancer Institute, 2014, v. 107, n. 1, p. 1, doi. 10.1093/jnci/dju358
By:
- Cao, Chunxia;
- Gao, Ruli;
- Zhang, Min;
- Amelio, Antonio L.;
- Fallahi, Mohammad;
- Chen, Zirong;
- Gu, Yumei;
- Hu, Chengbin;
- Welsh, Eric A.;
- Engel, Brienne E.;
- Haura, Eric B.;
- Cress, W. Douglas;
- Wu, Lizi;
- Zajac-Kaye, Maria;
- Kaye, Frederic J.
Publication type:
Article
Escape Excel: A tool for preventing gene symbol and accession conversion errors.
Published in:
PLoS ONE, 2017, v. 12, n. 9, p. 1, doi. 10.1371/journal.pone.0185207
By:
- Welsh, Eric A.;
- Stewart, Paul A.;
- Kuenzi, Brent M.;
- Eschrich, James A.
Publication type:
Article

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