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Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30509-y
By:
- Bensing, Barbara A.;
- Stubbs, Haley E.;
- Agarwal, Rupesh;
- Yamakawa, Izumi;
- Luong, Kelvin;
- Solakyildirim, Kemal;
- Yu, Hai;
- Hadadianpour, Azadeh;
- Castro, Manuel A.;
- Fialkowski, Kevin P.;
- Morrison, KeAndreya M.;
- Wawrzak, Zdzislaw;
- Chen, Xi;
- Lebrilla, Carlito B.;
- Baudry, Jerome;
- Smith, Jeremy C.;
- Sullam, Paul M.;
- Iverson, T. M.
Publication type:
Article
Unravelling the role of transient redox partner complexes in P450 electron transfer mechanics.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-20671-0
By:
- Hargrove, Tatiana Y.;
- Lamb, David C.;
- Smith, Jarrod A.;
- Wawrzak, Zdzislaw;
- Kelly, Steven L.;
- Lepesheva, Galina I.
Publication type:
Article
Recognition of O6-benzyl-2′-deoxyguanosine by a perimidinone-derived synthetic nucleoside: a DNA interstrand stacking interaction.
Published in:
Nucleic Acids Research, 2013, v. 41, n. 15, p. 7566, doi. 10.1093/nar/gkt488
By:
- Kowal, Ewa A.;
- Lad, Rahul R.;
- Pallan, Pradeep S.;
- Dhummakupt, Elizabeth;
- Wawrzak, Zdzislaw;
- Egli, Martin;
- Sturla, Shana J.;
- Stone, Michael P.
Publication type:
Article
Structure and activity of the NAD(P)<sup>+</sup>-dependent succinate semialdehyde dehydrogenase YneI from Salmonella typhimurium.
Published in:
Proteins, 2013, v. 81, n. 6, p. 1031, doi. 10.1002/prot.24227
By:
- Zheng, Hongyan;
- Beliavsky, Alina;
- Tchigvintsev, Anatoli;
- Brunzelle, Joseph S.;
- Brown, Greg;
- Flick, Robert;
- Evdokimova, Elena;
- Wawrzak, Zdzislaw;
- Mahadevan, Radhakrishnan;
- Anderson, Wayne F.;
- Savchenko, Alexei;
- Yakunin, Alexander F.
Publication type:
Article
High-resolution structures of scytalone dehydratase-inhibitor complexes crystallized at physiological pH.
Published in:
Proteins, 1999, v. 35, n. 4, p. 425, doi. 10.1002/(SICI)1097-0134(19990601)35:4<425::AID-PROT6>3.0.CO;2-1
By:
- Wawrzak, Zdzislaw;
- Sandalova, Tatyana;
- Steffens, James J.;
- Basarab, Gregory S.;
- Lundqvist, Tomas;
- Lindqvist, Ylva;
- Jordan, Douglas B.
Publication type:
Article
VFV as a New Effective CYP51 Structure-Derived Drug Candidate for Chagas Disease and Visceral Leishmaniasis.
Published in:
2015
By:
- Lepesheva, Galina I.;
- Hargrove, Tatiana Y.;
- Rachakonda, Girish;
- Wawrzak, Zdzislaw;
- Pomel, Sébastien;
- Cojean, Sandrine;
- Nde, Pius N.;
- Nes, W. David;
- Locuson, Charles W.;
- Calcutt, M. Wade;
- Waterman, Michael R.;
- Daniels, J. Scott;
- Loiseau, Philippe M.;
- Villalta, Fernando
Publication type:
journal article
Novel carbohydrate binding modules in the surface anchored α-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut.
Published in:
Molecular Microbiology, 2018, v. 107, n. 2, p. 249, doi. 10.1111/mmi.13881
By:
- Cockburn, Darrell W.;
- Suh, Carolyn;
- Medina, Krizia Perez;
- Duvall, Rebecca M.;
- Wawrzak, Zdzislaw;
- Henrissat, Bernard;
- Koropatkin, Nicole M.
Publication type:
Article
Structural basis of toxoplasma gondii perforin-like protein 1 membrane interaction and activity during egress.
Published in:
PLoS Pathogens, 2018, v. 14, n. 12, p. 1, doi. 10.1371/journal.ppat.1007476
By:
- Guerra, Alfredo J.;
- Zhang, Ou;
- Bahr, Constance M. E.;
- Huynh, My-Hang;
- DelProposto, James;
- Brown, William C.;
- Wawrzak, Zdzislaw;
- Koropatkin, Nicole M.;
- Carruthers, Vern B.
Publication type:
Article
Concerning P450 Evolution: Structural Analyses Support Bacterial Origin of Sterol 14α-Demethylases.
Published in:
Molecular Biology & Evolution, 2021, v. 38, n. 3, p. 952, doi. 10.1093/molbev/msaa260
By:
- Lamb, David C;
- Hargrove, Tatiana Y;
- Zhao, Bin;
- Wawrzak, Zdzislaw;
- Goldstone, Jared V;
- Nes, William David;
- Kelly, Steven L;
- Waterman, Michael R;
- Stegeman, John J;
- Lepesheva, Galina I
Publication type:
Article
BoGH13A<sub>Sus</sub> from Bacteroides ovatus represents a novel α-amylase used for Bacteroides starch breakdown in the human gut.
Published in:
Cellular & Molecular Life Sciences, 2023, v. 80, n. 8, p. 1, doi. 10.1007/s00018-023-04812-w
By:
- Brown, Haley A.;
- DeVeaux, Anna L.;
- Juliano, Brock R.;
- Photenhauer, Amanda L.;
- Boulinguiez, Matthieu;
- Bornschein, Russell E.;
- Wawrzak, Zdzislaw;
- Ruotolo, Brandon T.;
- Terrapon, Nicolas;
- Koropatkin, Nicole M.
Publication type:
Article
Crystal structures of the transpeptidase domain of the Mycobacterium tuberculosis penicillin-binding protein PonA1 reveal potential mechanisms of antibiotic resistance.
Published in:
2016
By:
- Filippova, Ekaterina V.;
- Kieser, Karen J.;
- Luan, Chi‐Hao;
- Wawrzak, Zdzislaw;
- Kiryukhina, Olga;
- Rubin, Eric J.;
- Anderson, Wayne F.
Publication type:
Editorial
Retraction: Structure and mechanism of the essential two-component signal-transduction system WalKR in Staphylococcus aureus.
Published in:
Nature Communications, 2017, v. 8, n. 2, p. 14331, doi. 10.1038/ncomms14331
By:
- Ji, Quanjiang;
- Chen, Peter J.;
- Qin, Guangrong;
- Deng, Xin;
- Hao, Ziyang;
- Wawrzak, Zdzislaw;
- Yeo, Won-sik;
- Quang, Jenny Winjing;
- Cho, Hoonsik;
- Luo, Guan-Zheng;
- Weng, Xiaocheng;
- You, Qiancheng;
- Luan, Chi-Hao;
- Yang, Xiaojing;
- Bae, Taeok;
- Yu, Kunqian;
- Jiang, Hualiang;
- He, Chuan
Publication type:
Article
Structure and mechanism of the essential two-component signal-transduction system WalKR in Staphylococcus aureus.
Published in:
Nature Communications, 2016, v. 7, n. 3, p. 11000, doi. 10.1038/ncomms11000
By:
- Ji, Quanjiang;
- Chen, Peter J.;
- Qin, Guangrong;
- Deng, Xin;
- Hao, Ziyang;
- Wawrzak, Zdzislaw;
- Yeo, Won-Sik;
- Quang, Jenny Winjing;
- Cho, Hoonsik;
- Luo, Guan-Zheng;
- Weng, Xiaocheng;
- You, Qiancheng;
- Luan, Chi-Hao;
- Yang, Xiaojing;
- Bae, Taeok;
- Yu, Kunqian;
- Jiang, Hualiang;
- He, Chuan
Publication type:
Article
Why Does TNA Cross-Pair More Strongly with RNA Than with DNA? An Answer From X-ray Analysis ( Financial support from the National Institutes of Health (Grant GM55237 to M.E.) is gratefully acknowledged. Parts of this work were performed at the DuPont-Northwestern-Dow Collaborative Access Team (DND-CAT) Synchrotron Research Center located at Sector 5 of the Advanced Photon Source, Argonne, IL (USA). DND-CAT is supported by the E. I. DuPont de Nemours & Co., The Dow Chemical Company, the U.S. National Science Foundation through Grant DMR-9304725, and the State of Illinois through the Department of Commerce and the Board of Higher Education Grant IBHE HECA NWU 96. )
Published in:
Angewandte Chemie, 2003, v. 115, n. 47, p. 6073, doi. 10.1002/ange.200352553
By:
- Pradeep S. Pallan;
- Christopher J. Wilds;
- Zdzislaw Wawrzak;
- Ramanarayanan Krishnamurthy;
- Albert Eschenmoser;
- Martin Egli
Publication type:
Article
Why Does TNA Cross-Pair More Strongly with RNA Than with DNA? An Answer From X-ray Analysis ( Financial support from the National Institutes of Health (Grant GM55237 to M.E.) is gratefully acknowledged. Parts of this work were performed at the DuPont-Northwestern-Dow Collaborative Access Team (DND-CAT) Synchrotron Research Center located at Sector 5 of the Advanced Photon Source, Argonne, IL (USA). DND-CAT is supported by the E. I. DuPont de Nemours & Co., The Dow Chemical Company, the U.S. National Science Foundation through Grant DMR-9304725, and the State of Illinois through the Department of Commerce and the Board of Higher Education Grant IBHE HECA NWU 96. )
Published in:
Angewandte Chemie International Edition, 2003, v. 42, n. 47, p. 5893, doi. 10.1002/anie.200352553
By:
- Pradeep S. Pallan;
- Christopher J. Wilds;
- Zdzislaw Wawrzak;
- Ramanarayanan Krishnamurthy;
- Albert Eschenmoser;
- Martin Egli
Publication type:
Article
X-ray Crystal Structure of Divalent Metal-Activated β-xylosidase, RS223BX.
Published in:
Applied Biochemistry & Biotechnology, 2015, v. 177, n. 3, p. 637, doi. 10.1007/s12010-015-1767-z
By:
- Jordan, Douglas;
- Braker, Jay;
- Wagschal, Kurt;
- Lee, Charles;
- Chan, Victor;
- Dubrovska, Ievgeniia;
- Anderson, Spencer;
- Wawrzak, Zdzislaw
Publication type:
Article
Degradation of complex arabinoxylans by human colonic Bacteroidetes.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-020-20737-5
By:
- Pereira, Gabriel V.;
- Abdel-Hamid, Ahmed M.;
- Dutta, Soumajit;
- D'Alessandro-Gabazza, Corina N.;
- Wefers, Daniel;
- Farris, Jacob A.;
- Bajaj, Shiv;
- Wawrzak, Zdzislaw;
- Atomi, Haruyuki;
- Mackie, Roderick I.;
- Gabazza, Esteban C.;
- Shukla, Diwakar;
- Koropatkin, Nicole M.;
- Cann, Isaac
Publication type:
Article
Structure of galactarate dehydratase, a new fold in an enolase involved in bacterial fitness after antibiotic treatment.
Published in:
Protein Science: A Publication of the Protein Society, 2020, v. 29, n. 3, p. 711, doi. 10.1002/pro.3796
By:
- Rosas‐Lemus, Monica;
- Minasov, George;
- Shuvalova, Ludmilla;
- Wawrzak, Zdzislaw;
- Kiryukhina, Olga;
- Mih, Nathan;
- Jaroszewski, Lukasz;
- Palsson, Bernhard;
- Godzik, Adam;
- Satchell, Karla J. F.
Publication type:
Article
The structure of a doripenem-bound OXA-51 class D β-lactamase variant with enhanced carbapenemase activity.
Published in:
Protein Science: A Publication of the Protein Society, 2016, v. 25, n. 12, p. 2152, doi. 10.1002/pro.3040
By:
- June, Cynthia M.;
- Muckenthaler, Taylor J.;
- Schroder, Emma C.;
- Klamer, Zachary L.;
- Wawrzak, Zdzislaw;
- Powers, Rachel A.;
- Szarecka, Agnieszka;
- Leonard, David A.
Publication type:
Article
Crystal structure of nonphosphorylated receiver domain of the stress response regulator RcsB from Escherichia coli.
Published in:
Protein Science: A Publication of the Protein Society, 2016, v. 25, n. 12, p. 2216, doi. 10.1002/pro.3050
By:
- Filippova, Ekaterina V.;
- Wawrzak, Zdzislaw;
- Ruan, Jiapeng;
- Pshenychnyi, Sergii;
- Schultz, Richard M.;
- Wolfe, Alan J.;
- Anderson, Wayne F.
Publication type:
Article

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