Works by Watson, Corey T.

Results: 38

Month of Birth and Thymic Output.

Published in:

JAMA Neurology, 2013, v. 70, n. 4, p. 527, doi. 10.1001/jamaneurol.2013.2116

By:

Disanto, Giulio;
Watson, Corey T.;
Meier, Ute C.;
Ebers, George C.;
Giovannoni, Gavin;
Ramagopalan, Sreeram V.

Publication type:

Article

Identification of Subject-Specific Immunoglobulin Alleles From Expressed Repertoire Sequencing Data.

Published in:

Frontiers in Immunology, 2019, p. N.PAG, doi. 10.3389/fimmu.2019.00129

By:

Gadala-Maria, Daniel;
Gidoni, Moriah;
Marquez, Susanna;
Vander Heiden, Jason A.;
Kos, Justin T.;
Watson, Corey T.;
O'Connor, Kevin C.;
Yaari, Gur;
Kleinstein, Steven H.

Publication type:

Article

Immunoglobulin Light Chain Gene Rearrangements, Receptor Editing and the Development of a Self-Tolerant Antibody Repertoire.

Published in:

Frontiers in Immunology, 2018, p. N.PAG, doi. 10.3389/fimmu.2018.02249

By:

Collins, Andrew M.;
Watson, Corey T.

Publication type:

Article

Genetic variation in the immunoglobulin heavy chain locus shapes the human antibody repertoire.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40070-x

By:

Rodriguez, Oscar L.;
Safonova, Yana;
Silver, Catherine A.;
Shields, Kaitlyn;
Gibson, William S.;
Kos, Justin T.;
Tieri, David;
Ke, Hanzhong;
Jackson, Katherine J. L.;
Boyd, Scott D.;
Smith, Melissa L.;
Marasco, Wayne A.;
Watson, Corey T.

Publication type:

Article

Gene Duplication and Divergence of Long Wavelength-Sensitive Opsin Genes in the Guppy, Poecilia reticulata.

Published in:

Journal of Molecular Evolution, 2011, v. 72, n. 2, p. 240, doi. 10.1007/s00239-010-9426-z

By:

Watson, Corey T.;
Gray, Suzanne M.;
Hoffmann, Margarete;
Lubieniecki, Krzysztof P.;
Joy, Jeffrey B.;
Sandkam, Ben A.;
Weigel, Detlef;
Loew, Ellis;
Dreyer, Christine;
Davidson, William D.;
Breden, Felix

Publication type:

Article

A BALB/c IGHV Reference Set, Defined by Haplotype Analysis of Long-Read VDJ-C Sequences From F1 (BALB/c x C57BL/6) Mice.

Published in:

Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.888555

By:

Jackson, Katherine J. L.;
Kos, Justin T.;
Lees, William;
Gibson, William S.;
Smith, Melissa Laird;
Peres, Ayelet;
Yaari, Gur;
Corcoran, Martin;
Busse, Christian E.;
Ohlin, Mats;
Watson, Corey T.;
Collins, Andrew M.

Publication type:

Article

Identification of rare de novo epigenetic variations in congenital disorders.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-04540-x

By:

Joshi, Ricky S.;
Garg, Paras;
Martin-Trujillo, Alejandro;
Patel, Nihir;
Jadhav, Bharati;
Watson, Corey T.;
Gibson, William;
Tessereau, Chloe;
Gelb, Bruce D.;
Sharp, Andrew J.;
Barbosa, Mafalda;
Buxbaum, Joseph D.;
Grice, Dorothy E.;
Soares, Gabriela;
De Rubeis, Silvia;
Reichert, Jennifer;
Chetnik, Kelsey;
Edelmann, Lisa;
Hui Mei;
Lopes, Fatima

Publication type:

Article

T cell receptor beta germline variability is revealed by inference from repertoire data.

Published in:

Genome Medicine, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13073-021-01008-4

By:

Omer, Aviv;
Peres, Ayelet;
Rodriguez, Oscar L;
Watson, Corey T;
Lees, William;
Polak, Pazit;
Collins, Andrew M;
Yaari, Gur

Publication type:

Article

Genomic Environment Impacts Color Vision Evolution in a Family with Visually Based Sexual Selection.

Published in:

Genome Biology & Evolution, 2017, v. 9, n. 11, p. 3100, doi. 10.1093/gbe/evx228

By:

Breden, Felix;
Sandkam, Benjamin A.;
Joy, Jeffrey B.;
Watson, Corey T.

Publication type:

Article

Genomic organization of duplicated short wavesensitiveand long wave-sensitive opsin genes inthe green swordtail, Xiphophorus helleri.

Published in:

BMC Evolutionary Biology, 2010, v. 10, p. 87, doi. 10.1186/1471-2148-10-87

By:

Watson, Corey T.;
Lubieniecki, Krzysztof P.;
Loew, Ellis;
Davidson, William S.;
Breden, Felix

Publication type:

Article

Genome-Wide DNA Methylation Profiling Reveals Epigenetic Changes in the Rat Nucleus Accumbens Associated With Cross-Generational Effects of Adolescent THC Exposure.

Published in:

Neuropsychopharmacology, 2015, v. 40, n. 13, p. 2993, doi. 10.1038/npp.2015.155

By:

Watson, Corey T;
Szutorisz, Henrietta;
Garg, Paras;
Martin, Qammarah;
Landry, Joseph A;
Sharp, Andrew J;
Hurd, Yasmin L

Publication type:

Article

HYBRIDIZATION LEADS TO SENSORY REPERTOIRE EXPANSION IN A GYNOGENETIC FISH, THE AMAZON MOLLY ( POECILIA FORMOSA): A TEST OF THE HYBRID-SENSORY EXPANSION HYPOTHESIS.

Published in:

Evolution, 2013, v. 67, n. 1, p. 120, doi. 10.1111/j.1558-5646.2012.01779.x

By:

Sandkam, Benjamin A.;
Joy, Jeffrey B.;
Watson, Corey T.;
Gonzalez‐Bendiksen, Pablo;
Gabor, Caitlin R.;
Breden, Felix

Publication type:

Article

A Novel Framework for Characterizing Genomic Haplotype Diversity in the Human Immunoglobulin Heavy Chain Locus.

Published in:

Frontiers in Immunology, 2020, v. 11, p. N.PAG, doi. 10.3389/fimmu.2020.02136

By:

Rodriguez, Oscar L.;
Gibson, William S.;
Parks, Tom;
Emery, Matthew;
Powell, James;
Strahl, Maya;
Deikus, Gintaras;
Auckland, Kathryn;
Eichler, Evan E.;
Marasco, Wayne A.;
Sebra, Robert;
Sharp, Andrew J.;
Smith, Melissa L.;
Bashir, Ali;
Watson, Corey T.

Publication type:

Article

A Proposed New Nomenclature for the Immunoglobulin Genes of Mus musculus.

Published in:

Frontiers in Immunology, 2019, v. 10, p. 1, doi. 10.3389/fimmu.2019.02961

By:

Busse, Christian E.;
Jackson, Katherine J. L.;
Watson, Corey T.;
Collins, Andrew M.

Publication type:

Article

Fumarates target the metabolic-epigenetic interplay of brain-homing T cells in multiple sclerosis.

Published in:

2019

By:

Ntranos, Achilles;
Ntranos, Vasilis;
Bonnefil, Valentina;
Liu, Jia;
Kim-Schulze, Seunghee;
He, Ye;
Zhu, Yunjiao;
Brandstadter, Rachel;
Watson, Corey T;
Sharp, Andrew J;
Sand, Ilana Katz;
Casaccia, Patrizia;
Katz Sand, Ilana

Publication type:

journal article

"Epic-Genetics": An Exploration of Preservice Helping Professionals' (Mis)Understanding of Epigenetic Influences on Human Development.

Published in:

Teaching & Learning Inquiry, 2020, v. 8, n. 1, p. 122, doi. 10.20343/teachlearninqu.8.1.9

By:

Snyder, Kate E.;
Pittard, Caroline M.;
Fowler, Allison;
Watson, Corey T.

Publication type:

Article

Genome-wide12 DNA methylation profiling in the superior temporal gyrus reveals epigenetic signatures associated with Alzheimer's disease.

Published in:

Genome Medicine, 2016, v. 8, p. 1, doi. 10.1186/s13073-015-0258-8

By:

Watson, Corey T.;
Roussos, Panos;
Garg, Paras;
Ho, Daniel J.;
Azam, Nidha;
Katsel, Pavel L.;
Haroutunian, Vahram;
Sharp, Andrew J.

Publication type:

Article

Reemergence of pathogenic, autoantibody-producing B cell clones in myasthenia gravis following B cell depletion therapy.

Published in:

Acta Neuropathologica Communications, 2022, v. 10, n. 1, p. 1, doi. 10.1186/s40478-022-01454-0

By:

Fichtner, Miriam L.;
Hoehn, Kenneth B.;
Ford, Easton E.;
Mane-Damas, Marina;
Oh, Sangwook;
Waters, Patrick;
Payne, Aimee S.;
Smith, Melissa L.;
Watson, Corey T.;
Losen, Mario;
Martinez-Martinez, Pilar;
Nowak, Richard J.;
Kleinstein, Steven H.;
O'Connor, Kevin C.

Publication type:

Article

Immunoglobulin genes, reproductive isolation and vertebrate speciation.

Published in:

Immunology & Cell Biology, 2022, v. 100, n. 7, p. 497, doi. 10.1111/imcb.12567

By:

Collins, Andrew M;
Watson, Corey T;
Breden, Felix

Publication type:

Article

A comparison of immunoglobulin IGHV, IGHD and IGHJ genes in wild‐derived and classical inbred mouse strains.

Published in:

Immunology & Cell Biology, 2019, v. 97, n. 10, p. 888, doi. 10.1111/imcb.12288

By:

Watson, Corey T;
Kos, Justin T;
Gibson, William S;
Newman, Leah;
Deikus, Gintaras;
Busse, Christian E;
Smith, Melissa L;
Jackson, Katherine JL;
Collins, Andrew M

Publication type:

Article

Digger: directed annotation of immunoglobulin and T cell receptor V, D, and J gene sequences and assemblies.

Published in:

Bioinformatics, 2024, v. 40, n. 3, p. 1, doi. 10.1093/bioinformatics/btae144

By:

Lees, William D;
Saha, Swati;
Yaari, Gur;
Watson, Corey T

Publication type:

Article

Reproducibility and Reuse of Adaptive Immune Receptor Repertoire Data.

Published in:

Frontiers in Immunology, 2017, p. 1, doi. 10.3389/fimmu.2017.01418

By:

Breden, Felix;
Prak, Eline T. Luning;
Peters, Bjoern;
Rubelt, Florian;
Schramm, Chaim A.;
Busse, Christian E.;
Heiden, Jason A. Vander;
Christley, Scott;
Bukhari, Syed Ahmad Chan;
Thorogood, Adrian;
Matsen IV, Frederick A.;
Wine, Yariv;
Laserson, Uri;
Klatzmann, David;
Douek, Daniel C.;
Lefranc, Marie-Paule;
Collins, Andrew M.;
Bubela, Tania;
Kleinstein, Steven H.;
Watson, Corey T.

Publication type:

Article

VDJbase: an adaptive immune receptor genotype and haplotype database.

Published in:

Nucleic Acids Research, 2020, v. 48, n. D1, p. D1051, doi. 10.1093/nar/gkz872

By:

Omer, Aviv;
Shemesh, Or;
Peres, Ayelet;
Polak, Pazit;
Shepherd, Adrian J;
Watson, Corey T;
Boyd, Scott D;
Collins, Andrew M;
Lees, William;
Yaari, Gur

Publication type:

Article

OGRDB: a reference database of inferred immune receptor genes.

Published in:

Nucleic Acids Research, 2020, v. 48, n. D1, p. D964, doi. 10.1093/nar/gkz822

By:

Lees, William;
Busse, Christian E;
Corcoran, Martin;
Ohlin, Mats;
Scheepers, Cathrine;
Matsen, Frederick A;
Yaari, Gur;
Watson, Corey T;
Community, The AIRR;
Collins, Andrew;
Shepherd, Adrian J

Publication type:

Article

Limitations of lymphoblastoid cell lines for establishing genetic reference datasets in the immunoglobulin loci.

Published in:

PLoS ONE, 2021, v. 16, n. 12, p. 1, doi. 10.1371/journal.pone.0261374

By:

Rodriguez, Oscar L.;
Sharp, Andrew J.;
Watson, Corey T.

Publication type:

Article

Erratum: IGHV1-69 polymorphism modulates anti-influenza antibody repertoires, correlates with IGHV utilization shifts and varies by ethnicity.

Published in:

Scientific Reports, 2016, p. 23876, doi. 10.1038/srep23876

By:

Avnir, Yuval;
Watson, Corey T.;
Glanville, Jacob;
Peterson, Eric C.;
Tallarico, Aimee S.;
Bennett, Andrew S.;
Qin, Kun;
Fu, Ying;
Huang, Chiung-Yu;
Beigel, John H.;
Breden, Felix;
Zhu, Quan;
Marasco, Wayne A.

Publication type:

Article

IGHV1-69 polymorphism modulates anti-influenza antibody repertoires, correlates with IGHV utilization shifts and varies by ethnicity.

Published in:

Scientific Reports, 2016, p. 20842, doi. 10.1038/srep20842

By:

Avnir, Yuval;
Watson, Corey T.;
Glanville, Jacob;
Peterson, Eric C.;
Tallarico, Aimee S.;
Bennett, Andrew S.;
Qin, Kun;
Fu, Ying;
Huang, Chiung-Yu;
Beigel, John H.;
Breden, Felix;
Zhu, Quan;
Marasco, Wayne A.

Publication type:

Article

AIRR-C IG Reference Sets: curated sets of immunoglobulin heavy and light chain germline genes.

Published in:

Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2023.1330153

By:

Collins, Andrew M.;
Ohlin, Mats;
Corcoran, Martin;
Heather, James M.;
Ralph, Duncan;
Law, Mansun;
Martínez-Barnetche, Jesus;
Jian Ye;
Richardson, Eve;
Gibson, William S.;
Rodriguez, Oscar L.;
Peres, Ayelet;
Yaari, Gur;
Watson, Corey T.;
Lees, William D.

Publication type:

Article

DNA methylation profiling in X;autosome translocations supports a role for L1 repeats in the spread of X chromosome inactivation.

Published in:

Human Molecular Genetics, 2014, v. 23, n. 5, p. 1224, doi. 10.1093/hmg/ddt553

By:

Bala Tannan, Neeta;
Brahmachary, Manisha;
Garg, Paras;
Borel, Christelle;
Alnefaie, Randah;
Watson, Corey T.;
Thomas, N. Simon;
Sharp, Andrew J.

Publication type:

Article

DNase hypersensitive sites and association with multiple sclerosis.

Published in:

Human Molecular Genetics, 2014, v. 23, n. 4, p. 942, doi. 10.1093/hmg/ddt489

By:

Disanto, Giulio;
Kjetil Sandve, Geir;
Ricigliano, Vito A.G.;
Pakpoor, Julia;
Berlanga-Taylor, Antonio J.;
Handel, Adam E.;
Kuhle, Jens;
Holden, Lars;
Watson, Corey T.;
Giovannoni, Gavin;
Handunnetthi, Lahiru;
Ramagopalan, Sreeram V.

Publication type:

Article

Vitamin D receptor binding, chromatin states and association with multiple sclerosis.

Published in:

Human Molecular Genetics, 2012, v. 21, n. 16, p. 3575, doi. 10.1093/hmg/dds189

By:

Disanto, Giulio;
Sandve, Geir Kjetil;
Berlanga-Taylor, Antonio J.;
Ragnedda, Giammario;
Morahan, Julia M.;
Watson, Corey T.;
Giovannoni, Gavin;
Ebers, George C.;
Ramagopalan, Sreeram V.

Publication type:

Article

Age-Associated Hyper-Methylated Regions in the Human Brain Overlap with Bivalent Chromatin Domains.

Published in:

PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0043840

By:

Watson, Corey T.;
Disanto, Giulio;
Sandve, Geir Kjetil;
Breden, Felix;
Giovannoni, Gavin;
Ramagopalan, Sreeram V.;
Wagner, Wolfgang

Publication type:

Article

The Effect of Single Nucleotide Polymorphisms from Genome Wide Association Studies in Multiple Sclerosis on Gene Expression.

Published in:

PLoS ONE, 2010, v. 5, n. 4, p. 1, doi. 10.1371/journal.pone.0010142

By:

Handel, Adam E.;
Handunnetthi, Lahiru;
Berlanga, Antonio J.;
Watson, Corey T.;
Morahan, Julia M.;
Ramagopalan, Sreeram V.

Publication type:

Article

Mechanisms Underlying Metabolic and Neural Defects in Zebrafish and Human Multiple Acyl-CoA Dehydrogenase Deficiency (MADD).

Published in:

PLoS ONE, 2009, v. 4, n. 12, p. 1, doi. 10.1371/journal.pone.0008329

By:

Yuanquan Song;
Selak, Mary A.;
Watson, Corey T.;
Coutts, Christopher;
Scherer, Paul C.;
Panzer, Jessica A.;
Gibbs, Sarah;
Scott, Marion O.;
Willer, Gregory;
Gregg, Ronald G.;
Ali, Declan W.;
Bennett, Michael J.;
Balice-Gordon, Rita J.

Publication type:

Article

Comment on "Genomic Hypomethylation in the Human Germline Associates with Selective Structural Mutability in the Human Genome.".

Published in:

2013

By:

Watson, Corey T.;
Garg, Paras;
Sharp, Andrew J.

Publication type:

Opinion

IGHV allele similarity clustering improves genotype inference from adaptive immune receptor repertoire sequencing data.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 16, p. e86, doi. 10.1093/nar/gkad603

By:

Peres, Ayelet;
Lees, William D;
Rodriguez, Oscar L;
Lee, Noah Y;
Polak, Pazit;
Hope, Ronen;
Kedmi, Meirav;
Collins, Andrew M;
Ohlin, Mats;
Kleinstein, Steven H;
Watson, Corey T;
Yaari, Gur

Publication type:

Article

Vaccine genetics of IGHV1-2 VRC01-class broadly neutralizing antibody precursor naïve human B cells.

Published in:

NPJ Vaccines, 2021, v. 6, n. 1, p. 1, doi. 10.1038/s41541-021-00376-7

By:

Lee, Jeong Hyun;
Toy, Laura;
Kos, Justin T.;
Safonova, Yana;
Schief, William R.;
Havenar-Daughton, Colin;
Watson, Corey T.;
Crotty, Shane

Publication type:

Article

The induction of peripheral trained immunity in the pancreas incites anti-tumor activity to control pancreatic cancer progression.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28407-4

By:

Geller, Anne E.;
Shrestha, Rejeena;
Woeste, Matthew R.;
Guo, Haixun;
Hu, Xiaoling;
Ding, Chuanlin;
Andreeva, Kalina;
Chariker, Julia H.;
Zhou, Mingqian;
Tieri, David;
Watson, Corey T.;
Mitchell, Robert A.;
Zhang, Huang-ge;
Li, Yan;
Martin II, Robert C. G.;
Rouchka, Eric C.;
Yan, Jun

Publication type:

Article