Works by Waldor, Matthew K.

Results: 86

Where Next for Microbiome Research?

Published in:

PLoS Biology, 2015, v. 13, n. 1, p. 1, doi. 10.1371/journal.pbio.1002050

By:

Waldor, Matthew K.;
Tyson, Gene;
Borenstein, Elhanan;
Ochman, Howard;
Moeller, Andrew;
Finlay, B. Brett;
Kong, Heidi H.;
Gordon, Jeffrey I.;
Nelson, Karen E.;
Dabbagh, Karim;
Smith, Hamilton

Publication type:

Article

A tRNA modification in Mycobacterium tuberculosis facilitates optimal intracellular growth.

Published in:

eLife, 2023, p. 1, doi. 10.7554/eLife.87146

By:

Tomasi, Francesca G.;
Kimura, Satoshi;
Rubin, Eric J.;
Waldor, Matthew K.

Publication type:

Article

The V ibrio parahaemolyticus effector VopC mediates Cdc42-dependent invasion of cultured cells but is not required for pathogenicity in an animal model of infection.

Published in:

Cellular Microbiology, 2014, v. 16, n. 6, p. 938, doi. 10.1111/cmi.12252

By:

Okada, Ryu;
Zhou, Xiaohui;
Hiyoshi, Hirotaka;
Matsuda, Shigeaki;
Chen, Xiang;
Akeda, Yukihiro;
Kashimoto, Takashige;
Davis, Brigid M.;
Iida, Tetsuya;
Waldor, Matthew K.;
Kodama, Toshio

Publication type:

Article

EspFU, a type III-translocated effector of actin assembly, fosters epithelial association and late-stage intestinal colonization by E. coli O157:H7.

Published in:

Cellular Microbiology, 2008, v. 10, n. 4, p. 836, doi. 10.1111/j.1462-5822.2007.01087.x

By:

Ritchie, Jennifer M.;
Brady, Michael J.;
Riley, Kathleen N.;
Ho, Theresa Deland;
Campellone, Kenneth G.;
Herman, Ira M.;
Donohue-Rolfe, Arthur;
Tzipori, Saul;
Waldor, Matthew K.;
Leong, John M.

Publication type:

Article

Mining regulatory 5′UTRs from cDNA deep sequencing datasets.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 5, p. 1504, doi. 10.1093/nar/gkp1121

By:

Livny, Jonathan;
Waldor, Matthew K.

Publication type:

Article

High-throughput sequencing reveals suppressors of Vibrio cholerae rpoE mutations: one fewer porin is enough.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 17, p. 5757, doi. 10.1093/nar/gkp568

By:

Davis, Brigid M.;
Waldor, Matthew K.

Publication type:

Article

Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 6, p. e46, doi. 10.1093/nar/gkp080

By:

Liu, Jane M.;
Livny, Jonathan;
Lawrence, Michael S.;
Kimball, Marc D.;
Waldor, Matthew K.;
Camilli, Andrew

Publication type:

Article

Identification of 17 Pseudomonas aeruginosa sRNAs and prediction of sRNA-encoding genes in 10 diverse pathogens using the bioinformatic tool sRNAPredict2.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 12, p. 3484, doi. 10.1093/nar/gkl453

By:

Livny, Jonathan;
Brencic, Anja;
Lory, Stephen;
Waldor, Matthew K.

Publication type:

Article

sRNAPredict: an integrative computational approach to identify sRNAs in bacterial genomes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 13, p. 4096, doi. 10.1093/nar/gki715

By:

Livny, Jonathan;
Fogel, Michael A.;
Davis, Brigid M.;
Waldor, Matthew K.

Publication type:

Article

Distinct pathways for modification of the bacterial cell wall by non-canonical D-amino acids.

Published in:

EMBO Journal, 2011, v. 30, n. 16, p. 3442, doi. 10.1038/emboj.2011.246

By:

Cava, Felipe;
de Pedro, Miguel A;
Lam, Hubert;
Davis, Brigid M;
Waldor, Matthew K

Publication type:

Article

Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow.

Published in:

Nature Reviews Microbiology, 2010, v. 8, n. 8, p. 552, doi. 10.1038/nrmicro2382

By:

Wozniak, Rachel A. F.;
Waldor, Matthew K.

Publication type:

Article

Pathogen clonal expansion underlies multiorgan dissemination and organ-specific outcomes during murine systemic infection.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.70910

By:

Hullahalli, Karthik;
Waldor, Matthew K.

Publication type:

Article

BipA exerts temperature-dependent translational control of biofilm-associated colony morphology in Vibrio cholerae.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.60607

By:

del Peso Santos, Teresa;
Alvarez, Laura;
Sit, Brandon;
Irazoki, Oihane;
Blake, Jonathon;
Warner, Benjamin R.;
Warr, Alyson R.;
Bala, Anju;
Benes, Vladimir;
Waldor, Matthew K.;
Fredrick, Kurt;
Cava, Felipe

Publication type:

Article

Mapping the ecological networks of microbial communities.

Published in:

Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-02090-2

By:

Yandong Xiao;
Angulo, Marco Tulio;
Friedman, Jonathan;
Waldor, Matthew K.;
Weiss, Scott T.;
Yang-Yu Liu

Publication type:

Article

Nucleolar c‐Myc recruitment by a Vibrio T3SS effector promotes host cell proliferation and bacterial virulence.

Published in:

EMBO Journal, 2021, v. 40, n. 2, p. 1, doi. 10.15252/embj.2020105699

By:

Hu, Maozhi;
Zhang, Yibei;
Gu, Dan;
Chen, Xiang;
Waldor, Matthew K;
Zhou, Xiaohui

Publication type:

Article

Fucose sensing regulates bacterial intestinal colonization.

Published in:

Nature, 2012, v. 492, n. 7427, p. 113, doi. 10.1038/nature11623

By:

Pacheco, Alline R.;
Curtis, Meredith M.;
Ritchie, Jennifer M.;
Munera, Diana;
Waldor, Matthew K.;
Moreira, Cristiano G.;
Sperandio, Vanessa

Publication type:

Article

Distinct segregation dynamics of the twoVibrio choleraechromosomes.

Published in:

Molecular Microbiology, 2005, v. 55, n. 1, p. 125, doi. 10.1111/j.1365-2958.2004.04379.x

By:

Fogel, Michael A.;
Waldor, Matthew K.

Publication type:

Article

Characterization of XerC- and XerD-dependent CTX phage integration inVibrio cholerae.

Published in:

Molecular Microbiology, 2004, v. 54, n. 4, p. 935, doi. 10.1111/j.1365-2958.2004.04309.x

By:

McLeod, Sarah M.;
Waldor, Matthew K.

Publication type:

Article

Hfq is essential for Vibrio cholerae virulence and downregulates σE expression.

Published in:

Molecular Microbiology, 2004, v. 53, n. 1, p. 345, doi. 10.1111/j.1365-2958.2004.04142.x

By:

Yanpeng Ding;
Davis, Brigid M.;
Waldor, Matthew K.

Publication type:

Article

Bacteriophage control of Shiga toxin 1 production and release by Escherichia coli.

Published in:

Molecular Microbiology, 2002, v. 44, n. 4, p. 957, doi. 10.1046/j.1365-2958.2002.02950.x

By:

Wagner, Patrick L;
Livny, Jonathan;
Neely, Melody N;
Acheson, David W. K;
Friedman, David I;
Waldor, Matthew K

Publication type:

Article

Evidence for a rolling-circle mechanism of phage DNA synthesis from both replicative and integrated forms of CTXφ.

Published in:

Molecular Microbiology, 2001, v. 41, n. 2, p. 311, doi. 10.1046/j.1365-2958.2001.02517.x

By:

Moyer, Kathryn E.;
Kimsey, Harvey H.;
Waldor, Matthew K.

Publication type:

Article

Site-specific integration of the conjugal Vibrio cholerae SXT element into prfC.

Published in:

Molecular Microbiology, 1999, v. 32, n. 1, p. 99, doi. 10.1046/j.1365-2958.1999.01330.x

By:

Hochhut, Bianca;
Waldor, Matthew K

Publication type:

Article

Replication and integration of a Vibrio cholerae cryptic plasmid linked to the CTX prophage.

Published in:

Molecular Microbiology, 1998, v. 28, n. 6, p. 1247, doi. 10.1046/j.1365-2958.1998.00889.x

By:

Rubin, Eric J.;
Lin, Wei;
Mekalanos, John J.;
Waldor, Matthew K.

Publication type:

Article

Regulation, replication, and integration functions of the Vibrio choierae CTXΦ are encoded by region RS2.

Published in:

Molecular Microbiology, 1997, v. 24, n. 6, p. 917, doi. 10.1046/j.1365-2958.1997.3911758.x

By:

Waldor, Matthew K.;
Rubin, Eric J.;
Pearson, Gregory D. N.;
Kimsey, Harvey;
Mekalanos, John J.

Publication type:

Article

Mouse enteric neurons control intestinal plasmacytoid dendritic cell function via serotonin-HTR7 signaling.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-53545-2

By:

Zhang, Hailong;
Hasegawa, Yuko;
Suzuki, Masataka;
Zhang, Ting;
Leitner, Deborah R.;
Jackson, Ruaidhrí P.;
Waldor, Matthew K.

Publication type:

Article

A pH-sensitive motif in an outer membrane protein activates bacterial membrane vesicle production.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-51364-z

By:

Dehinwal, Ruchika;
Gopinath, Tata;
Smith, Richard D.;
Ernst, Robert K.;
Schifferli, Dieter M.;
Waldor, Matthew K.;
Marassi, Francesca M.

Publication type:

Article

Pectin Hydrogels as Structural Platform for Antibacterial Drug Delivery.

Published in:

Polymers (20734360), 2024, v. 16, n. 22, p. 3202, doi. 10.3390/polym16223202

By:

Saravanan, Tejas;
Pan, Jennifer M.;
Zingl, Franz G.;
Waldor, Matthew K.;
Zheng, Yifan;
Khalil, Hassan A.;
Mentzer, Steven J.

Publication type:

Article

Shiga toxin remodels the intestinal epithelial transcriptional response to Enterohemorrhagic Escherichia coli.

Published in:

PLoS Pathogens, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.ppat.1009290

By:

Warr, Alyson R.;
Kuehl, Carole J.;
Waldor, Matthew K.

Publication type:

Article

RpoS and quorum sensing control expression and polar localization of V ibrio cholerae chemotaxis cluster III proteins in vitro and in vivo.

Published in:

Molecular Microbiology, 2015, v. 97, n. 4, p. 660, doi. 10.1111/mmi.13053

By:

Ringgaard, Simon;
Hubbard, Troy;
Mandlik, Anjali;
Davis, Brigid M.;
Waldor, Matthew K.

Publication type:

Article

Substrate specificity of an elongation-specific peptidoglycan endopeptidase and its implications for cell wall architecture and growth of Vibrio cholerae.

Published in:

Molecular Microbiology, 2013, v. 89, n. 5, p. 949, doi. 10.1111/mmi.12323

By:

Dörr, Tobias;
Cava, Felipe;
Lam, Hubert;
Davis, Brigid M.;
Waldor, Matthew K.

Publication type:

Article

Mobilizable genomic islands: going mobile with oriT mimicry M. K. Waldor Mobilizing genomic islands.

Published in:

Molecular Microbiology, 2010, v. 78, n. 3, p. 537, doi. 10.1111/j.1365-2958.2010.07365.x

By:

Waldor, Matthew K.

Publication type:

Article

Hfq negatively regulates type III secretion in EHEC and several other pathogens.

Published in:

Molecular Microbiology, 2009, v. 74, n. 2, p. 347, doi. 10.1111/j.1365-2958.2009.06856.x

By:

Shakhnovich, Elizabeth A.;
Davis, Brigid M.;
Waldor, Matthew K.

Publication type:

Article

RNase E-dependent processing stabilizes MicX, a Vibrio cholerae sRNA.

Published in:

Molecular Microbiology, 2007, v. 65, n. 2, p. 373, doi. 10.1111/j.1365-2958.2007.05796.x

By:

Davis, Brigid M.;
Waldor, Matthew K.

Publication type:

Article

Antimicrobial peptides activate the Vibrio choleraeσE regulon through an OmpU-dependent signalling pathway.

Published in:

Molecular Microbiology, 2007, v. 63, n. 3, p. 848, doi. 10.1111/j.1365-2958.2006.05544.x

By:

Mathur, Jyoti;
Davis, Brigid M.;
Waldor, Matthew K.

Publication type:

Article

CTXφ and Vibrio cholerae: exploring a newly recognized type of phage–host cell relationship.

Published in:

Molecular Microbiology, 2005, v. 57, n. 2, p. 347, doi. 10.1111/j.1365-2958.2005.04676.x

By:

McLeod, Sarah M.;
Kimsey, Harvey H.;
Davis, Brigid M.;
Waldor, Matthew K.

Publication type:

Article

Divided genomes: negotiating the cell cycle in prokaryotes with multiple chromosomes.

Published in:

Molecular Microbiology, 2005, v. 56, n. 5, p. 1129, doi. 10.1111/j.1365-2958.2005.04622.x

By:

Egan, Elizabeth S.;
Fogel, Michael A.;
Waldor, Matthew K.

Publication type:

Article

Emergence of a New Cholera Pandemic: Molecular Analysis of Virulence Determinants in Vibrio cholerae 0139 and Development of a Live Vaccine Prototype.

Published in:

Journal of Infectious Diseases, 1994, v. 170, n. 2, p. 278, doi. 10.1093/infdis/170.2.278

By:

Waldor, Matthew K.;
Mekalanos, John J.

Publication type:

Article

Transposon-insertion sequencing screens unveil requirements for EHEC growth and intestinal colonization.

Published in:

PLoS Pathogens, 2019, v. 15, n. 8, p. 1, doi. 10.1371/journal.ppat.1007652

By:

Warr, Alyson R.;
Hubbard, Troy P.;
Munera, Diana;
Blondel, Carlos J.;
Abel zur Wiesch, Pia;
Abel, Sören;
Wang, Xiaoxue;
Davis, Brigid M.;
Waldor, Matthew K.

Publication type:

Article

A streptococcal Fic domain-containing protein disrupts blood-brain barrier integrity by activating moesin in endothelial cells.

Published in:

PLoS Pathogens, 2019, v. 15, n. 5, p. 1, doi. 10.1371/journal.ppat.1007737

By:

Ma, Zhe;
Peng, Jie;
Yu, Dandan;
Park, Joseph S.;
Lin, Huixing;
Xu, Bin;
Lu, Chengping;
Fan, Hongjie;
Waldor, Matthew K.

Publication type:

Article

Critical role for a promoter discriminator in RpoS control of virulence in Edwardsiella piscicida.

Published in:

PLoS Pathogens, 2018, v. 14, n. 8, p. 1, doi. 10.1371/journal.ppat.1007272

By:

Yin, Kaiyu;
Guan, Yunpeng;
Ma, Ruiqing;
Wei, Lifan;
Liu, Bing;
Liu, Xiaohong;
Zhou, Xiangshan;
Ma, Yue;
Zhang, Yuanxing;
Waldor, Matthew K.;
Wang, Qiyao

Publication type:

Article

A live vaccine rapidly protects against cholera in an infant rabbit model.

Published in:

Science Translational Medicine, 2018, v. 10, n. 445, p. 1, doi. 10.1126/scitranslmed.aap8423

By:

Hubbard, Troy P.;
Billings, Gabriel;
Dörr, Tobias;
Sit, Brandon;
Warr, Alyson R.;
Kuehl, Carole J.;
Kim, Minsik;
Delgado, Fernanda;
Mekalanos, John J.;
Lewnard, Joseph A.;
Waldor, Matthew K.

Publication type:

Article

Sequence tag-based analysis of microbial population dynamics.

Published in:

Nature Methods, 2015, v. 12, n. 3, p. 223, doi. 10.1038/nmeth.3253

By:

Abel, Sören;
Abel zur Wiesch, Pia;
Chang, Hsiao-Han;
Davis, Brigid M;
Lipsitch, Marc;
Waldor, Matthew K

Publication type:

Article

Serine/threonine kinase PpkA coordinates the interplay between T6SS2 activation and quorum sensing in the marine pathogen <italic>Vibrio alginolyticus</italic>.

Published in:

Environmental Microbiology, 2018, v. 20, n. 2, p. 903, doi. 10.1111/1462-2920.14039

By:

Yang, Zhen;
Zhou, Xiaohui;
Ma, Yue;
Zhou, Mian;
Waldor, Matthew K.;
Zhang, Yuanxing;
Wang, Qiyao

Publication type:

Article

A D, D-carboxypeptidase is required for Vibrio cholerae halotolerance.

Published in:

Environmental Microbiology, 2015, v. 17, n. 2, p. 527, doi. 10.1111/1462-2920.12779

By:

Möll, Andrea;
Dörr, Tobias;
Alvarez, Laura;
Davis, Brigid M.;
Cava, Felipe;
Waldor, Matthew K.

Publication type:

Article

Virulence of an emerging pathogenic lineage of Vibrio nigripulchritudo is dependent on two plasmids.

Published in:

Environmental Microbiology, 2011, v. 13, n. 2, p. 296, doi. 10.1111/j.1462-2920.2010.02329.x

By:

Le Roux, Frédérique;
Labreuche, Yannick;
Davis, Brigid M.;
Iqbal, Naeem;
Mangenot, Sophie;
Goarant, Cyrille;
Mazel, Didier;
Waldor, Matthew K.

Publication type:

Article

Classic reaction kinetics can explain complex patterns of antibiotic action.

Published in:

Science Translational Medicine, 2015, v. 7, n. 287, p. 1, doi. 10.1126/scitranslmed.aaa8760

By:

zur Wiesch, Pia Abel;
Abel, Sören;
Gkotzis, Spyridon;
Ocampo, Paolo;
Engelstädter, Jan;
Hinkley, Trevor;
Magnus, Carsten;
Waldor, Matthew K.;
Udekwu, Klas;
Cohen, Ted

Publication type:

Article

A satellite phage-encoded antirepressor induces repressor aggregation and cholera toxin gene transfer.

Published in:

EMBO Journal, 2002, v. 21, n. 16, p. 4240, doi. 10.1093/emboj/cdf427

By:

Davis, Brigid M.;
Kimsey, Harvey H.;
Kane, Anne V.;
Waldor, Matthew K.

Publication type:

Article

Filamentous phage integration requires the host recombinases XerC and XerD.

Published in:

Nature, 2002, v. 417, n. 6889, p. 656, doi. 10.1038/nature00782

By:

Huber, Kathryn E.;
Waldor, Matthew K.

Publication type:

Article

Treasure trove for cholera research.

Published in:

Nature, 2000, v. 406, n. 6795, p. 469, doi. 10.1038/35020178

By:

Waldor, Matthew K.;
RayChaudhuri, Debabrata

Publication type:

Article

The replication initiator of the cholera pathogen's second chromosome shows structural similarity to plasmid initiators.

Published in:

Nucleic Acids Research, 2017, v. 45, n. 7, p. 3724, doi. 10.1093/nar/gkw1288

By:

Orlova, Natalia;
Gerding, Matthew;
Ivashkiv, Olha;
Olinares, Paul Dominic B.;
Chait, Brian T.;
Waldor, Matthew K.;
Jeruzalmi, David

Publication type:

Article