Works by Wade, Rebecca

Results: 131

The Non-phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase GapN Is a Potential New Drug Target in Streptococcus pyogenes.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.802427

By:

Eisenberg, Philip;
Albert, Leon;
Teuffel, Jonathan;
Zitzow, Eric;
Michaelis, Claudia;
Jarick, Jane;
Sehlke, Clemens;
Große, Lisa;
Bader, Nicole;
Nunes-Alves, Ariane;
Kreikemeyer, Bernd;
Schindelin, Hermann;
Wade, Rebecca C.;
Fiedler, Tomas

Publication type:

Article

Correction to Building Coaches' Skills in Addressing Child Abuse and Neglect.

Published in:

2018

By:

Anderson-Butcher, Dawn;
Wade-Mdivanian, Rebecca;
Davis, Jerome;
Paluta, Lauren;
Gibson, Allison;
Wilson, Mark

Publication type:

Correction Notice

Building Coaches' Skills in Addressing Child Abuse and Neglect.

Published in:

JOPERD: The Journal of Physical Education, Recreation & Dance, 2017, v. 88, n. 9, p. 8, doi. 10.1080/07303084.2017.1367740

By:

Anderson-Butcher, Dawn;
Wade-Mdivanian, Rebecca;
Davis, Jerome;
Paluta, Lauren;
Gibson, Allison;
Wilson, Mark

Publication type:

Article

webPIPSA: a web server for the comparison of protein interaction properties.

Published in:

Nucleic Acids Research, 2008, v. 36, n. suppl_2, p. W276, doi. 10.1093/nar/gkn181

By:

Richter, Stefan;
Wenzel, Anne;
Stein, Matthias;
Gabdoulline, Razif R.;
Wade, Rebecca C.

Publication type:

Article

MolSurfer: a macromolecular interface navigator.

Published in:

Nucleic Acids Research, 2003, v. 31, n. 13, p. 3349, doi. 10.1093/nar/gkg588

By:

Gabdoulline, Razif R.;
Wade, Rebecca C.;
Walther, Dirk

Publication type:

Article

DSMM: a Database of Simulated Molecular Motions.

Published in:

Nucleic Acids Research, 2003, v. 31, n. 1, p. 456, doi. 10.1093/nar/gkg113

By:

Finocchiaro, Giacomo;
Wang, Ting;
Hoffmann, Rene;
Gonzalez, Aitor;
Wade, Rebecca C.

Publication type:

Article

ProSAT<sup>+</sup>: visualizing sequence annotations on 3D structure.

Published in:

PEDS: Protein Engineering, Design & Selection, 2016, v. 29, n. 8, p. 281, doi. 10.1093/protein/gzw021

By:

Stank, Antonia;
Richter, Stefan;
Wade, Rebecca C.

Publication type:

Article

Multiresolution molecular dynamics simulations reveal the interplay between conformational variability and functional interactions in membrane‐bound cytochrome P450 2B4.

Published in:

Protein Science: A Publication of the Protein Society, 2024, v. 33, n. 10, p. 1, doi. 10.1002/pro.5165

By:

Han, Sungho Bosco;
Teuffel, Jonathan;
Mukherjee, Goutam;
Wade, Rebecca C.

Publication type:

Article

Dynamic enzyme docking to the ribosome coordinates N-terminal processing with polypeptide folding.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 7, p. 843, doi. 10.1038/nsmb.2615

By:

Sandikci, Arzu;
Gloge, Felix;
Martinez, Michael;
Mayer, Matthias P;
Wade, Rebecca;
Bukau, Bernd;
Kramer, Günter

Publication type:

Article

A tightly regulated molecular toggle controls AAA+ disaggregase.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 12, p. 1338, doi. 10.1038/nsmb.2441

By:

Oguchi, Yuki;
Kummer, Eva;
Seyffer, Fabian;
Berynskyy, Mykhaylo;
Anstett, Benjamin;
Zahn, Regina;
Wade, Rebecca C;
Mogk, Axel;
Bukau, Bernd

Publication type:

Article

Molecular Modeling in Drug Design.

Published in:

2019

By:

Wade, Rebecca C.;
Salo-Ahen, Outi M. H.

Publication type:

Editorial

Solvents to Fragments to Drugs: MD Applications in Drug Design.

Published in:

Molecules, 2018, v. 23, n. 12, p. 3269, doi. 10.3390/molecules23123269

By:

Defelipe, Lucas A.;
Arcon, Juan Pablo;
Modenutti, Carlos P.;
Marti, Marcelo A.;
Turjanski, Adrián G.;
Barril, Xavier;
Wade, Rebecca;
Salo-Ahen, Outi

Publication type:

Article

Binding Affinity via Docking: Fact and Fiction.

Published in:

Molecules, 2018, v. 23, n. 8, p. 1899, doi. 10.3390/molecules23081899

By:

Wade, Rebecca;
Pantsar, Tatu;
Poso, Antti

Publication type:

Article

Be Aware of Aggregators in the Search for Potential Human ecto-5′-Nucleotidase Inhibitors.

Published in:

Molecules, 2018, v. 23, n. 8, p. 1876, doi. 10.3390/molecules23081876

By:

Wade, Rebecca;
Viviani, Lucas G.;
Amaral, Antonia T.-do;
Piccirillo, Erika;
de Rezende, Leandro;
Cheffer, Arquimedes;
Ulrich, Henning;
Carmona-Ribeiro, Ana Maria

Publication type:

Article

Comparative Study of Carborane- and Phenyl-Modified Adenosine Derivatives as Ligands for the A2A and A3 Adenosine Receptors Based on a Rigid in Silico Docking and Radioligand Replacement Assay.

Published in:

Molecules, 2018, v. 23, n. 8, p. 1846, doi. 10.3390/molecules23081846

By:

Wade, Rebecca;
Salo-Ahen, Outi;
Vincenzi, Marian;
Leśnikowski, Zbigniew J.;
Bednarska, Katarzyna

Publication type:

Article

Computational Insight into the Effect of Natural Compounds on the Destabilization of Preformed Amyloid-β(1–40) Fibrils.

Published in:

Molecules, 2018, v. 23, n. 6, p. 1320, doi. 10.3390/molecules23061320

By:

Tavanti, Francesco;
Pedone, Alfonso;
Menziani, Maria Cristina;
Wade, Rebecca;
Salo-Ahen, Outi

Publication type:

Article

Chroman-4-One Derivatives Targeting Pteridine Reductase 1 and Showing Anti-Parasitic Activity.

Published in:

Molecules, 2017, v. 22, n. 3, p. 426, doi. 10.3390/molecules22030426

By:

Di Pisa, Flavio;
Landi, Giacomo;
Dello Iacono, Lucia;
Pozzi, Cecilia;
Borsari, Chiara;
Ferrari, Stefania;
Santucci, Matteo;
Santarem, Nuno;
Cordeiro-da-Silva, Anabela;
Moraes, Carolina B.;
Alcantara, Laura M.;
Fontana, Vanessa;
Freitas-Junior, Lucio H.;
Gul, Sheraz;
Kuzikov, Maria;
Behrens, Birte;
Pöhner, Ina;
Wade, Rebecca C.;
Paola Costi, Maria;
Mangani, Stefano

Publication type:

Article

Development and Biological Characterization of a Novel Selective TrkA Agonist with Neuroprotective Properties against Amyloid Toxicity.

Published in:

Biomedicines, 2022, v. 10, n. 3, p. 614, doi. 10.3390/biomedicines10030614

By:

Rogdakis, Thanasis;
Charou, Despoina;
Latorrata, Alessia;
Papadimitriou, Eleni;
Tsengenes, Alexandros;
Athanasiou, Christina;
Papadopoulou, Marianna;
Chalikiopoulou, Constantina;
Katsila, Theodora;
Ramos, Isbaal;
Prousis, Kyriakos C.;
Wade, Rebecca C.;
Sidiropoulou, Kyriaki;
Calogeropoulou, Theodora;
Gravanis, Achille;
Charalampopoulos, Ioannis

Publication type:

Article

MatchTope: A tool to predict the cross reactivity of peptides complexed with Major Histocompatibility Complex I.

Published in:

Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.930590

By:

de Almeida Mendes, Marcus Fabiano;
de Souza Bragatte, Marcelo;
Vianna, Priscila;
de Freitas, Martiela Vaz;
Pöhner, Ina;
Richter, Stefan;
Wade, Rebecca C.;
Mauro Salzano, Francisco;
Fioravanti Vieira, Gustavo

Publication type:

Article

GTP regulates the microtubule nucleation activity of γ-tubulin.

Published in:

Nature Cell Biology, 2013, v. 15, n. 11, p. 1317, doi. 10.1038/ncb2863

By:

Gombos, Linda;
Neuner, Annett;
Berynskyy, Mykhaylo;
Fava, Luca L.;
Wade, Rebecca C.;
Sachse, Carsten;
Schiebel, Elmar

Publication type:

Article

Social-Emotional Learning Interventions in Youth Sport: What Matters in Design?

Published in:

Child & Adolescent Social Work Journal, 2021, v. 38, n. 4, p. 367, doi. 10.1007/s10560-021-00773-w

By:

Anderson-Butcher, Dawn;
Bates, Samantha;
Amorose, Anthony;
Wade-Mdivianian, Rebecca;
Lower-Hoppe, Leeann

Publication type:

Article

INTEGRATING SCIENCE AND TECHNOLOGY TO SUPPORT STREAM NATURALIZATION NEAR CHICAGO, ILLINOIS.

Published in:

Journal of the American Water Resources Association, 2002, v. 38, n. 4, p. 931, doi. 10.1111/j.1752-1688.2002.tb05535.x

By:

Wade, Rebecca J.;
Rhoads, Bruce L.;
Rodriguez, Jose;
Daniels, Melinda;
Wilson, David;
Herricks, Edwin E.;
Bombardelli, Fabian;
Garcia, Marcelo;
Schwartz, John

Publication type:

Article

pK<sub>a</sub> calculations for class C β-lactamases: The role of tyr-150.

Published in:

Proteins, 2000, v. 40, n. 1, p. 23, doi. 10.1002/(SICI)1097-0134(20000701)40:1<23::AID-PROT40>3.0.CO;2-7

By:

Lamotte-Brasseur, Josette;
Dubus, Alain;
Wade, Rebecca C.

Publication type:

Article

Classification of protein sequences by homology modeling and quantitative analysis of electrostatic similarity.

Published in:

Proteins, 1999, v. 37, n. 3, p. 379, doi. 10.1002/(SICI)1097-0134(19991115)37:3<379::AID-PROT6>3.0.CO;2-K

By:

Blomberg, Niklas;
Gabdoulline, Razif R.;
Nilges, Michael;
Wade, Rebecca C.

Publication type:

Article

Hydration energy landscape of the active site cavity in cytochrome P450cam.

Published in:

Proteins, 1998, v. 32, n. 3, p. 381, doi. 10.1002/(SICI)1097-0134(19980815)32:3<381::AID-PROT12>3.0.CO;2-5

By:

Helms, Volkhard;
Wade, Rebecca C.

Publication type:

Article

Species dependence of enzyme-substrate encounter rates for triose phosphate isomerases.

Published in:

Proteins, 1998, v. 31, n. 4, p. 406, doi. 10.1002/(SICI)1097-0134(19980601)31:4<406::AID-PROT7>3.0.CO;2-F

By:

Wade, Rebecca C.;
Gabdoulline, Razif R.;
Luty, Brock A.

Publication type:

Article

CASP2 molecular docking predictions with the LIGIN software.

Published in:

Proteins, 1997, v. 29, n. S1, p. 210, doi. 10.1002/(SICI)1097-0134(1997)1+<210::AID-PROT28>3.0.CO;2-Q

By:

Sobolev, Vladimir;
Moallem, Theodore M.;
Wade, Rebecca C.;
Vriend, Gert;
Edelman, Marvin

Publication type:

Article

Molecular docking using surface complementarity.

Published in:

Proteins, 1996, v. 25, n. 1, p. 120, doi. 10.1002/(SICI)1097-0134(199605)25:1<120::AID-PROT10>3.0.CO;2-M

By:

Sobolev, Vladimir;
Wade, Rebecca C.;
Vriend, Gert;
Edelman, Marvin

Publication type:

Article

Organism-Adapted Specificity of the Allosteric Regulation of Pyruvate Kinase in Lactic Acid Bacteria.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 7, p. 1, doi. 10.1371/journal.pcbi.1003159

By:

Veith, Nadine;
Feldman-Salit, Anna;
Cojocaru, Vlad;
Henrich, Stefan;
Kummer, Ursula;
Wade, Rebecca C.

Publication type:

Article

Structure and Dynamics of the Membrane-Bound Cytochrome P450 2C9.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 8, p. 1, doi. 10.1371/journal.pcbi.1002152

By:

Cojocaru, Vlad;
Balali-Mood, Kia;
Sansom, Mark S. P.;
Wade, Rebecca C.

Publication type:

Article

Maximizing Youth Experiences in Community Sport Settings: The Design and Impact of the LiFE Sports Camp.

Published in:

Journal of Sport Management, 2014, v. 28, n. 2, p. 236, doi. 10.1123/jsm.2012-0237

By:

Anderson-Butcher, Dawn;
Riley, Allison;
Amorose, Anthony;
Iachini, Aidyn;
Wade-Mdivanian, Rebecca

Publication type:

Article

Application of a simple quantum chemical approach to ligand fragment scoring for Trypanosoma brucei pteridine reductase 1 inhibition.

Published in:

Journal of Computer-Aided Molecular Design, 2017, v. 31, n. 8, p. 715, doi. 10.1007/s10822-017-0035-4

By:

Jedwabny, Wiktoria;
Panecka-Hofman, Joanna;
Dyguda-Kazimierowicz, Edyta;
Wade, Rebecca;
Sokalski, W.

Publication type:

Article

Do mammalian cytochrome P450s show multiple ligand access pathways and ligand channelling?

Published in:

EMBO Reports, 2005, v. 6, n. 6, p. 584, doi. 10.1038/sj.embor.7400420

By:

Schleinkofer, Karin;
Winn, Peter J.;
Lüdemann, Susanne K.;
Wade, Rebecca C.

Publication type:

Article

Computational screening of the effects of mutations on protein-protein off-rates and dissociation mechanisms by τRAMD.

Published in:

Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06880-5

By:

D’Arrigo, Giulia;
Kokh, Daria B.;
Nunes-Alves, Ariane;
Wade, Rebecca C.

Publication type:

Article

Anti-trypanosomatid structure-based drug design – lessons learned from targeting the folate pathway.

Published in:

Expert Opinion on Drug Discovery, 2022, v. 17, n. 9, p. 1029, doi. 10.1080/17460441.2022.2113776

By:

Panecka-Hofman, Joanna;
Poehner, Ina;
Wade, Rebecca C.

Publication type:

Article

Utilizing Business, University, and Community Resources to Target Adolescent Prescription Drug Abuse.

Published in:

Prevention Researcher, 2012, v. 19, n. 1, p. 17

By:

Wade-Mdivanian, Rebecca;
Anderson-Butcher, Dawn;
Hale, Kenneth;
Kwiek, Nicole;
Smock, Jill;
Radigan, Dianne;
Lineberger, Jessica

Publication type:

Article

Halogen–Aromatic π Interactions Modulate Inhibitor Residence Times.

Published in:

Angewandte Chemie International Edition, 2018, v. 57, n. 24, p. 7220, doi. 10.1002/anie.201801666

By:

Heroven, Christina;
Georgi, Victoria;
Ganotra, Gaurav K.;
Brennan, Paul;
Wolfreys, Finn;
Wade, Rebecca C.;
Fernández‐Montalván, Amaury E.;
Chaikuad, Apirat;
Knapp, Stefan

Publication type:

Article

The Sculpture of the Écorché, Henry Moore Institute, 7 June 2014.

Published in:

2014

By:

Wade, Rebecca

Publication type:

Proceeding

LiFEsports in the Pandemic: COVID-19 Didn't Stop Us!

Published in:

Journal of Sport Behavior, 2023, v. 46, n. 3, p. 1

By:

Anderson-Butcher, Dawn;
Wade-Mdivanian, Rebecca;
Amorose, Anthony J.;
Davis, Jerome;
Scheadler, Travis R.

Publication type:

Article

Examining the Impact of Counselor and Peer Support on Social Skill Development in a Sport-Based Positive Youth Development Program.

Published in:

Journal of Sport Behavior, 2022, v. 45, n. 1, p. 1, doi. 10.2105/AJPH.2007.111609

By:

Barcza-Renner, Kelly;
Anderson-Butcher, Dawn;
Amorose, Anthony J.;
Wade-Mdivanian, Rebecca

Publication type:

Article

Brownian dynamics simulations of biomolecular diffusional association processes.

Published in:

WIREs: Computational Molecular Science, 2023, v. 13, n. 3, p. 1, doi. 10.1002/wcms.1649

By:

Muñiz‐Chicharro, Abraham;
Votapka, Lane W.;
Amaro, Rommie E.;
Wade, Rebecca C.

Publication type:

Article

Cover Image, Volume 13, Issue 1.

Published in:

WIREs: Computational Molecular Science, 2023, v. 13, n. 1, p. 1, doi. 10.1002/wcms.1657

By:

van Keulen, Siri C.;
Martin, Juliette;
Colizzi, Francesco;
Frezza, Elisa;
Trpevski, Daniel;
Diaz, Nuria Cirauqui;
Vidossich, Pietro;
Rothlisberger, Ursula;
Hellgren Kotaleski, Jeanette;
Wade, Rebecca C.;
Carloni, Paolo

Publication type:

Article

Multiscale molecular simulations to investigate adenylyl cyclase‐based signaling in the brain.

Published in:

WIREs: Computational Molecular Science, 2023, v. 13, n. 1, p. 1, doi. 10.1002/wcms.1623

By:

van Keulen, Siri C.;
Martin, Juliette;
Colizzi, Francesco;
Frezza, Elisa;
Trpevski, Daniel;
Diaz, Nuria Cirauqui;
Vidossich, Pietro;
Rothlisberger, Ursula;
Hellgren Kotaleski, Jeanette;
Wade, Rebecca C.;
Carloni, Paolo

Publication type:

Article

Receptor flexibility in small-molecule docking calculations.

Published in:

WIREs: Computational Molecular Science, 2011, v. 1, n. 2, p. 298, doi. 10.1002/wcms.29

By:

Kokh, Daria B.;
Wade, Rebecca C.;
Wenzel, Wolfgang

Publication type:

Article

On the use of PIPSA to Guide Target-Selective Drug Design.

Published in:

ChemMedChem, 2008, v. 3, n. 3, p. 413, doi. 10.1002/cmdc.200700154

By:

Henrich, Stefan;
Richter, Stefan;
Wade, Rebecca C.

Publication type:

Article

Identification of antiparasitic drug targets using a multi-omics workflow in the acanthocephalan model.

Published in:

BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08882-1

By:

Schmidt, Hanno;
Mauer, Katharina;
Glaser, Manuel;
Dezfuli, Bahram Sayyaf;
Hellmann, Sören Lukas;
Silva Gomes, Ana Lúcia;
Butter, Falk;
Wade, Rebecca C.;
Hankeln, Thomas;
Herlyn, Holger

Publication type:

Article

The trypanocidal benzoxaborole AN7973 inhibits trypanosome mRNA processing.

Published in:

PLoS Pathogens, 2018, v. 14, n. 9, p. 1, doi. 10.1371/journal.ppat.1007315

By:

Begolo, Daniela;
Vincent, Isabel M.;
Giordani, Federica;
Pöhner, Ina;
Witty, Michael J.;
Rowan, Timothy G.;
Bengaly, Zakaria;
Gillingwater, Kirsten;
Freund, Yvonne;
Wade, Rebecca C.;
Barrett, Michael P.;
Clayton, Christine

Publication type:

Article

Halogenaromatische π‐Wechselwirkungen modulieren die Verweilzeit von Inhibitoren.

Published in:

Angewandte Chemie, 2018, v. 130, n. 24, p. 7338, doi. 10.1002/ange.201801666

By:

Heroven, Christina;
Georgi, Victoria;
Ganotra, Gaurav K.;
Brennan, Paul;
Wolfreys, Finn;
Wade, Rebecca C.;
Fernández‐Montalván, Amaury E.;
Chaikuad, Apirat;
Knapp, Stefan

Publication type:

Article

The cisproline(i - 1)-aromatic(i) interaction: Folding of the Ala-cisPro-Tyr peptide characterized by NMR and theoretical approaches.

Published in:

Journal of Biomolecular NMR, 2000, v. 17, n. 1, p. 63, doi. 10.1023/A:1008380807603

By:

Nardi, Frederico;
Kemmink, Johan;
Sattler, Michael;
Wade, Rebecca C.

Publication type:

Article

Crucial HSP70 co-chaperone complex unlocks metazoan protein disaggregation.

Published in:

Nature, 2015, v. 524, n. 7564, p. 247, doi. 10.1038/nature14884

By:

Nillegoda, Nadinath B.;
Kirstein, Janine;
Szlachcic, Anna;
Berynskyy, Mykhaylo;
Stank, Antonia;
Stengel, Florian;
Arnsburg, Kristin;
Gao, Xuechao;
Scior, Annika;
Aebersold, Ruedi;
Guilbride, D. Lys;
Wade, Rebecca C.;
Morimoto, Richard I.;
Mayer, Matthias P.;
Bukau, Bernd

Publication type:

Article