Works matching AU Vries, Ronald


Results: 126
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    Genome evolution and transcriptome plasticity is associated with adaptation to monocot and dicot plants in Colletotrichum fungi.

    Published in:
    GigaScience, 2024, v. 13, n. 1, p. 1, doi. 10.1093/gigascience/giae036
    By:
    • Baroncelli, Riccardo;
    • Cobo-Díaz, José F;
    • Benocci, Tiziano;
    • Peng, Mao;
    • Battaglia, Evy;
    • Haridas, Sajeet;
    • Andreopoulos, William;
    • LaButti, Kurt;
    • Pangilinan, Jasmyn;
    • Lipzen, Anna;
    • Koriabine, Maxim;
    • Bauer, Diane;
    • Le Floch, Gaetan;
    • Mäkelä, Miia R;
    • Drula, Elodie;
    • Henrissat, Bernard;
    • Grigoriev, Igor V;
    • Crouch, Jo Anne;
    • de Vries, Ronald P;
    • Sukno, Serenella A
    Publication type:
    Article
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    (Post-)Genomics approaches in fungal research.

    Published in:
    Briefings in Functional Genomics, 2014, v. 13, n. 6, p. 424, doi. 10.1093/bfgp/elu028
    By:
    • Aguilar-Pontes, María Victoria;
    • de Vries, Ronald P.;
    • Zhou, Miaomiao
    Publication type:
    Article
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    Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88.

    Published in:
    Nature Biotechnology, 2007, v. 25, n. 2, p. 221, doi. 10.1038/nbt1282
    By:
    • Pel, Herman J.;
    • de Winde, Johannes H.;
    • Archer, David B.;
    • Dyer, Paul S.;
    • Hofmann, Gerald;
    • Schaap, Peter J.;
    • Turner, Geoffrey;
    • de Vries, Ronald P.;
    • Albang, Richard;
    • Albermann, Kaj;
    • Andersen, Mikael R.;
    • Bendtsen, Jannick D.;
    • Benen, Jacques A. E.;
    • van den Berg, Marco;
    • Breestraat, Stefaan;
    • Caddick, Mark X.;
    • Contreras, Roland;
    • Cornell, Michael;
    • Coutinho, Pedro M.;
    • Danchin, Etienne G. J.
    Publication type:
    Article
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    Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis.

    Published in:
    Nature, 2006, v. 444, n. 7115, p. 97, doi. 10.1038/nature05248
    By:
    • Kämper, Jörg;
    • Kahmann, Regine;
    • Bölker, Michael;
    • Ma, Li-Jun;
    • Brefort, Thomas;
    • Saville, Barry J.;
    • Banuett, Flora;
    • Kronstad, James W.;
    • Gold, Scott E.;
    • Müller, Olaf;
    • Perlin, Michael H.;
    • Wösten, Han A. B.;
    • de Vries, Ronald;
    • Ruiz-Herrera, José;
    • Reynaga-Peña, Cristina G.;
    • Snetselaar, Karen;
    • McCann, Michael;
    • Pérez-Martín, José;
    • Feldbrügge, Michael;
    • Basse, Christoph W.
    Publication type:
    Article
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    The Synthetic Potential of Fungal Feruloyl Esterases: A Correlation with Current Classification Systems and Predicted Structural Properties.

    Published in:
    Catalysts (2073-4344), 2018, v. 8, n. 6, p. 242, doi. 10.3390/catal8060242
    By:
    • Antonopoulou, Io;
    • Dilokpimol, Adiphol;
    • Iancu, Laura;
    • Mäkelä, Miia R.;
    • Varriale, Simona;
    • Cerullo, Gabriella;
    • Hüttner, Silvia;
    • Uthoff, Stefan;
    • Jütten, Peter;
    • Piechot, Alexander;
    • Steinbüchel, Alexander;
    • Olsson, Lisbeth;
    • Faraco, Vincenza;
    • Hildén, Kristiina S.;
    • de Vries, Ronald P.;
    • Rova, Ulrika;
    • Christakopoulos, Paul
    Publication type:
    Article
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    Functional diversity in Dichomitus squalens monokaryons.

    Published in:
    IMA Fungus, 2017, v. 8, n. 1, p. 17, doi. 10.5598/imafungus.2017.08.01.02
    By:
    • Casado López, Sara;
    • Theelen, Bart;
    • Manserra, Serena;
    • Issak, Tedros Yonatan;
    • Rytioja, Johanna;
    • Mäkelä, Miia R.;
    • de Vries, Ronald P.
    Publication type:
    Article
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    Generic names in Magnaporthales.

    Published in:
    IMA Fungus, 2016, v. 7, n. 1, p. 155, doi. 10.5598/imafungus.2016.07.01.09
    By:
    • Zhang, Ning;
    • Luo, Jing;
    • Rossman, Amy Y.;
    • Aoki, Takayuki;
    • Chuma, Izumi;
    • Crous, Pedro W.;
    • Dean, Ralph;
    • de Vries, Ronald P.;
    • Donofrio, Nicole;
    • Hyde, Kevin D.;
    • Lebrun, Marc-Henri;
    • Talbot, Nicholas J.;
    • Tharreau, Didier;
    • Tosa, Yukio;
    • Valent, Barbara;
    • Wang, Zonghua;
    • Xu, Jin-Rong
    Publication type:
    Article
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    Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.

    Published in:
    Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-017-1151-0
    By:
    • de Vries, Ronald P.;
    • Riley, Robert;
    • Wiebenga, Ad;
    • Aguilar-Osorio, Guillermo;
    • Amillis, Sotiris;
    • Akemi Uchima, Cristiane;
    • Anderluh, Gregor;
    • Asadollahi, Mojtaba;
    • Askin, Marion;
    • Barry, Kerrie;
    • Battaglia, Evy;
    • Bayram, Özgür;
    • Benocci, Tiziano;
    • Braus-Stromeyer, Susanna A.;
    • Caldana, Camila;
    • Cánovas, David;
    • Cerqueira, Gustavo C.;
    • Fusheng Chen;
    • Wanping Chen;
    • Cindy Choi
    Publication type:
    Article
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    Microbial biotransformation – an important tool for the study of drug metabolism.

    Published in:
    Xenobiotica, 2019, v. 49, n. 8, p. 877, doi. 10.1080/00498254.2018.1512018
    By:
    • Salter, Rhys;
    • Beshore, Douglas C.;
    • Colletti, Steven L.;
    • Evans, Liam;
    • Gong, Yong;
    • Helmy, Roy;
    • Liu, Yong;
    • Maciolek, Cheri M.;
    • Martin, Gary;
    • Pajkovic, Natasa;
    • Phipps, Richard;
    • Small, James;
    • Steele, Jonathan;
    • de Vries, Ronald;
    • Williams, Headley;
    • Martin, Iain J.
    Publication type:
    Article
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    The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry.

    Published in:
    PLoS Genetics, 2012, v. 8, n. 11, p. 1, doi. 10.1371/journal.pgen.1003088
    By:
    • de Wit, Pierre J. G. M.;
    • van der Burgt, Ate;
    • Ökmen, Bilal;
    • Stergiopoulos, Ioannis;
    • Abd-Elsalam, Kamel A.;
    • Aerts, Andrea L.;
    • Bahkali, Ali H.;
    • Beenen, Henriek G.;
    • Chettri, Pranav;
    • Cox, Murray P.;
    • Datema, Erwin;
    • de Vries, Ronald P.;
    • Dhillon, Braham;
    • Ganley, Austen R.;
    • Griffiths, Scott A.;
    • Guo, Yanan;
    • Hamelin, Richard C.;
    • Henrissat, Bernard;
    • Kabir, M. Shahjahan;
    • Jashni, Mansoor Karimi
    Publication type:
    Article
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    Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea.

    Published in:
    PLoS Genetics, 2011, v. 7, n. 8, p. 1, doi. 10.1371/journal.pgen.1002230
    By:
    • Amselem, Joelle;
    • Cuomo, Christina A.;
    • van Kan, Jan A. L.;
    • Viaud, Muriel;
    • Benito, Ernesto P.;
    • Couloux, Arnaud;
    • Coutinho, Pedro M.;
    • de Vries, Ronald P.;
    • Dyer, Paul S.;
    • Fillinger, Sabine;
    • Fournier, Elisabeth;
    • Gout, Lilian;
    • Hahn, Matthias;
    • Kohn, Linda;
    • Lapalu, Nicolas;
    • Plummer, Kim M.;
    • Pradier, Jean-Marc;
    • Quévillon, Emmanuel;
    • Sharon, Amir;
    • Simon, Adeline
    Publication type:
    Article
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    The Sugar Metabolic Model of Aspergillus niger Can Only Be Reliably Transferred to Fungi of Its Phylum.

    Published in:
    Journal of Fungi, 2022, v. 8, n. 12, p. 1315, doi. 10.3390/jof8121315
    By:
    • Li, Jiajia;
    • Chroumpi, Tania;
    • Garrigues, Sandra;
    • Kun, Roland S.;
    • Meng, Jiali;
    • Salazar-Cerezo, Sonia;
    • Aguilar-Pontes, Maria Victoria;
    • Zhang, Yu;
    • Tejomurthula, Sravanthi;
    • Lipzen, Anna;
    • Ng, Vivian;
    • Clendinen, Chaevien S.;
    • Tolić, Nikola;
    • Grigoriev, Igor V.;
    • Tsang, Adrian;
    • Mäkelä, Miia R.;
    • Snel, Berend;
    • Peng, Mao;
    • de Vries, Ronald P.
    Publication type:
    Article
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    Growing a circular economy with fungal biotechnology: a white paper.

    Published in:
    Fungal Biology & Biotechnology, 2020, v. 7, n. 1, p. 1, doi. 10.1186/s40694-020-00095-z
    By:
    • Meyer, Vera;
    • Basenko, Evelina Y.;
    • Benz, J. Philipp;
    • Braus, Gerhard H.;
    • Caddick, Mark X.;
    • Csukai, Michael;
    • de Vries, Ronald P.;
    • Endy, Drew;
    • Frisvad, Jens C.;
    • Gunde-Cimerman, Nina;
    • Haarmann, Thomas;
    • Hadar, Yitzhak;
    • Hansen, Kim;
    • Johnson, Robert I.;
    • Keller, Nancy P.;
    • Kraševec, Nada;
    • Mortensen, Uffe H.;
    • Perez, Rolando;
    • Ram, Arthur F. J.;
    • Record, Eric
    Publication type:
    Article
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    Colonies of the fungus Aspergillus niger are highly differentiated to adapt to local carbon source variation.

    Published in:
    Environmental Microbiology, 2020, v. 22, n. 3, p. 1154, doi. 10.1111/1462-2920.14907
    By:
    • Daly, Paul;
    • Peng, Mao;
    • Mitchell, Hugh D.;
    • Kim, Young‐Mo;
    • Ansong, Charles;
    • Brewer, Heather;
    • Gijsel, Peter;
    • Lipton, Mary S.;
    • Markillie, Lye Meng;
    • Nicora, Carrie D.;
    • Orr, Galya;
    • Wiebenga, Ad;
    • Hildén, Kristiina S.;
    • Kabel, Mirjam A.;
    • Baker, Scott E.;
    • Mäkelä, Miia R.;
    • Vries, Ronald P.
    Publication type:
    Article
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