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Direct Salmonella injection into enteroid cells allows the study of host–pathogen interactions in the cytosol with high spatiotemporal resolution.
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- PLoS Biology, 2024, v. 22, n. 4, p. 1, doi. 10.1371/journal.pbio.3002597
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- Article
Dashing Growth Curves: a web application for rapid and interactive analysis of microbial growth curves.
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- BMC Bioinformatics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12859-024-05692-y
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- Article
mBARq: a versatile and user-friendly framework for the analysis of DNA barcodes from transposon insertion libraries, knockout mutants, and isogenic strain populations.
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- Bioinformatics, 2024, v. 40, n. 2, p. 1, doi. 10.1093/bioinformatics/btae078
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- Article
Identifying microbiota community patterns important for plant protection using synthetic communities and machine learning.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-43793-z
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The microbiota conditions a gut milieu that selects for wild-type Salmonella Typhimurium virulence.
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- PLoS Biology, 2023, v. 21, n. 8, p. 1, doi. 10.1371/journal.pbio.3002253
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Generation of an Escherichia coli strain growing on methanol via the ribulose monophosphate cycle.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32744-9
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- Article
Dynamic character displacement among a pair of bacterial phyllosphere commensals in situ.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30469-3
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Mitochondria transplantation between living cells.
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- PLoS Biology, 2022, v. 20, n. 3, p. 1, doi. 10.1371/journal.pbio.3001576
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Injection into and extraction from single fungal cells.
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- Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03127-z
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Methanol-dependent Escherichia coli strains with a complete ribulose monophosphate cycle.
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- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-19235-5
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ScalaFlux: A scalable approach to quantify fluxes in metabolic subnetworks.
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- PLoS Computational Biology, 2020, v. 16, n. 4, p. 1, doi. 10.1371/journal.pcbi.1007799
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- Article
Molecular Basis of Growth Inhibition by Acetate of an Adenylate Cyclase-Deficient Mutant of Corynebacterium glutamicum.
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- Frontiers in Microbiology, 2020, p. 1, doi. 10.3389/fmicb.2020.00087
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- Article
Complex general stress response regulation in Sphingomonas melonis Fr1 revealed by transcriptional analyses.
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- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-45788-7
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Use of rare‐earth elements in the phyllosphere colonizer Methylobacterium extorquens PA1.
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- Molecular Microbiology, 2019, v. 111, n. 5, p. 1152, doi. 10.1111/mmi.14208
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Methanol-essential growth of Escherichia coli.
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- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-03937-y
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- Article
Phosphorelay through the bifunctional phosphotransferase PhyT controls the general stress response in an alphaproteobacterium.
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- PLoS Genetics, 2018, v. 14, n. 4, p. 1, doi. 10.1371/journal.pgen.1007294
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- Article
Toblerols: Cyclopropanol‐Containing Polyketide Modulators of Antibiosis in Methylobacteria.
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- Angewandte Chemie, 2018, v. 130, n. 4, p. 989, doi. 10.1002/ange.201709056
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- Article
Toblerols: Cyclopropanol‐Containing Polyketide Modulators of Antibiosis in Methylobacteria.
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- Angewandte Chemie International Edition, 2018, v. 57, n. 4, p. 977, doi. 10.1002/anie.201709056
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- Article
The Arabidopsis leaf transcriptome reveals distinct but also overlapping responses to colonization by phyllosphere commensals and pathogen infection with impact on plant health.
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- New Phytologist, 2016, v. 212, n. 1, p. 192, doi. 10.1111/nph.14036
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Multiple σ<sup>EcfG</sup> and NepR Proteins Are Involved in the General Stress Response in Methylobacterium extorquens.
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- PLoS ONE, 2016, v. 11, n. 3, p. 1, doi. 10.1371/journal.pone.0152519
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- Article
Core pathways operating during methylotrophy of Bacillus methanolicus MGA3 and induction of a bacillithiol-dependent detoxification pathway upon formaldehyde stress.
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- Molecular Microbiology, 2015, v. 98, n. 6, p. 1089, doi. 10.1111/mmi.13200
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Klassifizierung und Manipulation des synthetischen Potenzials carboxylierender Reduktasen aus dem Zentralmetabolismus und der Polyketid-Biosynthese.
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- Angewandte Chemie, 2015, v. 127, n. 45, p. 13659, doi. 10.1002/ange.201505282
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Screening and Engineering the Synthetic Potential of Carboxylating Reductases from Central Metabolism and Polyketide Biosynthesis.
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- Angewandte Chemie International Edition, 2015, v. 54, n. 45, p. 13457, doi. 10.1002/anie.201505282
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- Article
The branched CcsA/ CckA- ChpT- CtrA phosphorelay of S phingomonas melonis controls motility and biofilm formation.
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- Molecular Microbiology, 2015, v. 97, n. 1, p. 47, doi. 10.1111/mmi.13011
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- Article
The use of ene adducts to study and engineer enoyl-thioester reductases.
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- Nature Chemical Biology, 2015, v. 11, n. 6, p. 398, doi. 10.1038/nchembio.1794
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- Article
High-level production of ethylmalonyl-CoA pathway-derived dicarboxylic acids by Methylobacterium extorquens under cobalt-deficient conditions and by polyhydroxybutyrate negative strains.
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- Applied Microbiology & Biotechnology, 2015, v. 99, n. 8, p. 3407, doi. 10.1007/s00253-015-6418-3
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Methylobacterium extorquens: methylotrophy and biotechnological applications.
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- Applied Microbiology & Biotechnology, 2015, v. 99, n. 2, p. 517, doi. 10.1007/s00253-014-6240-3
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Methylotrophy in the thermophilic Bacillus methanolicus, basic insights and application for commodity production from methanol.
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- Applied Microbiology & Biotechnology, 2015, v. 99, n. 2, p. 535, doi. 10.1007/s00253-014-6224-3
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Fast sampling method for mammalian cell metabolic analyses using liquid chromatography-mass spectrometry.
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- Nature Protocols, 2015, v. 10, n. 1, p. 1, doi. 10.1038/nprot.2014.198
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In vitro activation of NAD‐dependent alcohol dehydrogenases by Nudix hydrolases is more widespread than assumed.
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- FEBS Letters, 2014, v. 588, n. 17, p. 2993, doi. 10.1016/j.febslet.2014.06.008
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Spatial distribution analyses of natural phyllosphere-colonizing bacteria on A rabidopsis thaliana revealed by fluorescence in situ hybridization.
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- Environmental Microbiology, 2014, v. 16, n. 7, p. 2329, doi. 10.1111/1462-2920.12482
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- Article
A Synthetic Community Approach Reveals Plant Genotypes Affecting the Phyllosphere Microbiota.
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- PLoS Genetics, 2014, v. 10, n. 4, p. 1, doi. 10.1371/journal.pgen.1004283
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- Article
Proteomic analysis of the thermophilic methylotroph Bacillus methanolicus MGA3.
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- Proteomics, 2014, v. 14, n. 6, p. 725, doi. 10.1002/pmic.201300515
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A Proteomic Approach of Bradyrhizobium/Aeschynomene Root and Stem Symbioses Reveals the Importance of the fixA Locus for Symbiosis.
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- International Journal of Molecular Sciences, 2014, v. 15, n. 3, p. 3660, doi. 10.3390/ijms15033660
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Structural basis for −10 promoter element melting by environmentally induced sigma factors.
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- Nature Structural & Molecular Biology, 2014, v. 21, n. 3, p. 269, doi. 10.1038/nsmb.2777
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Direct evidence for a covalent ene adduct intermediate in NAD(P)H-dependent enzymes.
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- Nature Chemical Biology, 2014, v. 10, n. 1, p. 50, doi. 10.1038/nchembio.1385
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- Article
Mutation in the C-Di-AMP Cyclase <i>dacA</i> Affects Fitness and Resistance of Methicillin Resistant <i>Staphylococcus aureus</i>.
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- PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0073512
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- Article
Microfluidics: Force-Controlled Fluidic Injection into Single Cell Nuclei (Small 11/2013).
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- Small, 2013, v. 9, n. 11, p. 1870, doi. 10.1002/smll.201370061
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- Article
Force-Controlled Fluidic Injection into Single Cell Nuclei.
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- Small, 2013, v. 9, n. 11, p. 1904, doi. 10.1002/smll.201202276
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- Article
eMZed: an open source framework in Python for rapid and interactive development of LC/MS data analysis workflows.
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- Bioinformatics, 2013, v. 29, n. 7, p. 963, doi. 10.1093/bioinformatics/btt080
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- Article
Methylotrophic <i>Bacillus methanolicus</i> Encodes Two Chromosomal and One Plasmid Born NAD<sup>+</sup> Dependent Methanol Dehydrogenase Paralogs with Different Catalytic and Biochemical Properties.
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- PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0059188
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- Article
Microbial life in the phyllosphere.
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- Nature Reviews Microbiology, 2012, v. 10, n. 12, p. 828, doi. 10.1038/nrmicro2910
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Rapid and Serial Quantification of Adhesion Forces of Yeast and Mammalian Cells.
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- PLoS ONE, 2012, v. 7, n. 12, p. 1, doi. 10.1371/journal.pone.0052712
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The molecular basis of phosphate discrimination in arsenate-rich environments.
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- Nature, 2012, v. 491, n. 7422, p. 134, doi. 10.1038/nature11517
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- Article
Co-Consumption of Methanol and Succinate by Methylobacterium extorquens AM1.
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- PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0048271
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- Article
Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 7, p. 1378, doi. 10.1038/ismej.2011.192
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- Article
Bacterial anoxygenic photosynthesis on plant leaf surfaces.
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- Environmental Microbiology Reports, 2012, v. 4, n. 2, p. 209, doi. 10.1111/j.1758-2229.2011.00323.x
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- Article
Characterization of Methylobacterium strains isolated from the phyllosphere and description of Methylobacterium longum sp. nov.
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- Antonie van Leeuwenhoek, 2012, v. 101, n. 1, p. 169, doi. 10.1007/s10482-011-9650-6
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Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a.
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- BMC Genomics, 2012, v. 13, n. 1, p. 534, doi. 10.1186/1471-2164-13-534
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- Article
Microbial rhodopsins on leaf surfaces of terrestrial plants.
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- Environmental Microbiology, 2012, v. 14, n. 1, p. 140, doi. 10.1111/j.1462-2920.2011.02554.x
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- Article