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Plasmodium falciparum genomic surveillance reveals spatial and temporal trends, association of genetic and physical distance, and household clustering.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-021-04572-2
By:
- Sy, Mouhamad;
- Deme, Awa B.;
- Warren, Joshua L.;
- Early, Angela;
- Schaffner, Stephen;
- Daniels, Rachel F.;
- Dieye, Baba;
- Ndiaye, Ibrahima Mbaye;
- Diedhiou, Younous;
- Mbaye, Amadou Moctar;
- Volkman, Sarah K.;
- Hartl, Daniel L.;
- Wirth, Dyann F.;
- Ndiaye, Daouda;
- Bei, Amy K.
Publication type:
Article
Plasmodium falciparum K76T pfcrt Gene Mutations and Parasite Population Structure, Haiti, 2006-2009.
Published in:
2016
By:
- Charles, Macarthur;
- Das, Sanchita;
- Daniels, Rachel;
- Kirkman, Laura;
- Delva, Glavdia G.;
- Destine, Rodney;
- Escalante, Ananias;
- Villegas, Leopoldo;
- Daniels, Noah M.;
- Shigyo, Kristi;
- Volkman, Sarah K.;
- Pape, Jean W.;
- Golightly, Linnie M.
Publication type:
journal article
Population genomics of Plasmodium vivax in Panama to assess the risk of case importation on malaria elimination.
Published in:
PLoS Neglected Tropical Diseases, 2020, v. 14, n. 12, p. 1, doi. 10.1371/journal.pntd.0008962
By:
- Buyon, Lucas E.;
- Santamaria, Ana Maria;
- Early, Angela M.;
- Quijada, Mario;
- Barahona, Itza;
- Lasso, Jose;
- Avila, Mario;
- Volkman, Sarah K.;
- Marti, Matthias;
- Neafsey, Daniel E.;
- Obaldia III, Nicanor
Publication type:
Article
Development of a Single Nucleotide Polymorphism Barcode to Genotype Plasmodium vivax Infections.
Published in:
PLoS Neglected Tropical Diseases, 2015, v. 9, n. 3, p. 1, doi. 10.1371/journal.pntd.0003539
By:
- Baniecki, Mary Lynn;
- Faust, Aubrey L.;
- Schaffner, Stephen F.;
- Park, Daniel J.;
- Galinsky, Kevin;
- Daniels, Rachel F.;
- Hamilton, Elizabeth;
- Ferreira, Marcelo U.;
- Karunaweera, Nadira D.;
- Serre, David;
- Zimmerman, Peter A.;
- Sá, Juliana M.;
- Wellems, Thomas E.;
- Musset, Lise;
- Legrand, Eric;
- Melnikov, Alexandre;
- Neafsey, Daniel E.;
- Volkman, Sarah K.;
- Wirth, Dyann F.;
- Sabeti, Pardis C.
Publication type:
Article
Development of a Single Nucleotide Polymorphism Barcode to Genotype Plasmodium vivax Infections.
Published in:
PLoS Neglected Tropical Diseases, 2015, v. 9, n. 3, p. 1, doi. 10.1371/journal.pntd.0003539
By:
- Baniecki, Mary Lynn;
- Faust, Aubrey L.;
- Schaffner, Stephen F.;
- Park, Daniel J.;
- Galinsky, Kevin;
- Daniels, Rachel F.;
- Hamilton, Elizabeth;
- Ferreira, Marcelo U.;
- Karunaweera, Nadira D.;
- Serre, David;
- Zimmerman, Peter A.;
- Sá, Juliana M.;
- Wellems, Thomas E.;
- Musset, Lise;
- Legrand, Eric;
- Melnikov, Alexandre;
- Neafsey, Daniel E.;
- Volkman, Sarah K.;
- Wirth, Dyann F.;
- Sabeti, Pardis C.
Publication type:
Article
A genome-wide map of diversity in Plasmodium falciparum.
Published in:
Nature Genetics, 2007, v. 39, n. 1, p. 113, doi. 10.1038/ng1930
By:
- Volkman, Sarah K.;
- Sabeti, Pardis C.;
- DeCaprio, David;
- Neafsey, Daniel E.;
- Schaffner, Stephen F.;
- Milner Jr., Danny A.;
- Daily, Johanna P.;
- Sarr, Ousmane;
- Ndiaye, Daouda;
- Ndir, Omar;
- Mboup, Soulyemane;
- Duraisingh, Manoj T.;
- Lukens, Amanda;
- Derr, Alan;
- Stange-Thomann, Nicole;
- Waggoner, Skye;
- Onofrio, Robert;
- Ziaugra, Liuda;
- Mauceli, Evan;
- Gnerre, Sante
Publication type:
Article
Genomic investigation of atypical malaria cases in Kanel, northern Senegal.
Published in:
Malaria Journal, 2021, v. 20, n. 1, p. 1, doi. 10.1186/s12936-021-03637-x
By:
- Sy, Mouhamad;
- Badiane, Aida Sadikh;
- Deme, Awa Bineta;
- Gaye, Amy;
- Ndiaye, Tolla;
- Fall, Fatou Ba;
- Siddle, Katherine J.;
- Dieye, Baba;
- Ndiaye, Yaye Die;
- Diallo, Mamadou Alpha;
- Diongue, Khadim;
- Seck, Mame Cheikh;
- Ndiaye, Ibrahima Mbaye;
- Cissé, Moustapha;
- Gueye, Alioune Badara;
- Sène, Doudou;
- Dieye, Yakou;
- Souané, Tamba;
- MacInnis, Bronwyn;
- Volkman, Sarah K.
Publication type:
Article
Allelic diversity of MSP1 and MSP2 repeat loci correlate with levels of malaria endemicity in Senegal and Nigerian populations.
Published in:
Malaria Journal, 2021, v. 20, n. 1, p. 1, doi. 10.1186/s12936-020-03563-4
By:
- Oboh, Mary A.;
- Ndiaye, Tolla;
- Diongue, Khadim;
- Ndiaye, Yaye D.;
- Sy, Mouhamad;
- Deme, Awa B.;
- Diallo, Mamadou A.;
- Yade, Mamadou S.;
- Volkman, Sarah K.;
- Badiane, Aida S.;
- Amambua-Ngwa, Alfred;
- Ndiaye, Daouda
Publication type:
Article
Molecular epidemiology of Plasmodium falciparum by multiplexed amplicon deep sequencing in Senegal.
Published in:
Malaria Journal, 2020, v. 19, n. 1, p. 1, doi. 10.1186/s12936-020-03471-7
By:
- Ndiaye, Tolla;
- Sy, Mouhamad;
- Gaye, Amy;
- Siddle, Katherine J.;
- Park, Daniel J.;
- Bei, Amy K.;
- Deme, Awa B.;
- Mbaye, Aminata;
- Dieye, Baba;
- Ndiaye, Yaye Die;
- Ndiaye, Ibrahima Mbaye;
- Diallo, Mamadou Alpha;
- Diongue, Khadim;
- Volkman, Sarah K.;
- Badiane, Aida Sadikh;
- Ndiaye, Daouda
Publication type:
Article
Genetic analysis reveals unique characteristics of Plasmodium falciparum parasite populations in Haiti.
Published in:
Malaria Journal, 2020, v. 19, n. 1, p. N.PAG, doi. 10.1186/s12936-020-03439-7
By:
- Daniels, Rachel F.;
- Chenet, Stella;
- Rogier, Eric;
- Lucchi, Naomi;
- Herman, Camelia;
- Pierre, Baby;
- Lemoine, Jean Frantz;
- Boncy, Jacques;
- Wirth, Dyann F.;
- Chang, Michelle A.;
- Udhayakumar, Venkatachalam;
- Volkman, Sarah K.
Publication type:
Article
Genetic diversity of Plasmodium falciparum in Grande Comore Island.
Published in:
Malaria Journal, 2020, v. 19, n. 1, p. N.PAG, doi. 10.1186/s12936-020-03384-5
By:
- Papa Mze, Nasserdine;
- Bogreau, Hervé;
- Diedhiou, Cyrille K.;
- Herdell, Vendela;
- Rahamatou, Silai;
- Bei, Amy K.;
- Volkman, Sarah K.;
- Basco, Leonardo;
- Mboup, Souleymane;
- Ahouidi, Ambroise D.
Publication type:
Article
Persistence of Plasmodium falciparum parasitemia after artemisinin combination therapy: evidence from a randomized trial in Uganda.
Published in:
Scientific Reports, 2016, p. 26330, doi. 10.1038/srep26330
By:
- Chang, Hsiao-Han;
- Meibalan, Elamaran;
- Zelin, Justin;
- Daniels, Rachel;
- Eziefula, Alice C.;
- Meyer, Evan C.;
- Tadesse, Fitsum;
- Grignard, Lynn;
- Joice, Regina C.;
- Drakeley, Chris;
- Wirth, Dyann F.;
- Volkman, Sarah K.;
- Buckee, Caroline;
- Bousema, Teun;
- Marti, Matthias
Publication type:
Article
Altered drug susceptibility during host adaptation of a Plasmodium falciparum strain in a non-human primate model.
Published in:
Scientific Reports, 2016, p. 21216, doi. 10.1038/srep21216
By:
- Obaldía III, Nicanor;
- Dow, Geoffrey S.;
- Gerena, Lucia;
- Kyle, Dennis;
- Otero, William;
- Mantel, Pierre-Yves;
- Baro, Nicholas;
- Daniels, Rachel;
- Mukherjee, Angana;
- Childs, Lauren M.;
- Buckee, Caroline;
- Duraisingh, Manoj T.;
- Volkman, Sarah K.;
- Wirth, Dyann F.;
- Marti, Matthias
Publication type:
Article
An Adjustable Gas-Mixing Device to Increase Feasibility of <i>In Vitro</i> Culture of <i>Plasmodium falciparum</i> Parasites in the Field.
Published in:
PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0090928
By:
- Bei, Amy K.;
- Patel, Saurabh D.;
- Volkman, Sarah K.;
- Ahouidi, Ambroise D.;
- Ndiaye, Daouda;
- Mboup, Souleymane;
- Wirth, Dyann F.
Publication type:
Article
Genetic Surveillance Detects Both Clonal and Epidemic Transmission of Malaria following Enhanced Intervention in Senegal.
Published in:
PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0060780
By:
- Daniels, Rachel;
- Chang, Hsiao-Han;
- Séne, Papa Diogoye;
- Park, Danny C.;
- Neafsey, Daniel E.;
- Schaffner, Stephen F.;
- Hamilton, Elizabeth J.;
- Lukens, Amanda K.;
- Van Tyne, Daria;
- Mboup, Souleymane;
- Sabeti, Pardis C.;
- Ndiaye, Daouda;
- Wirth, Dyann F.;
- Hartl, Daniel L.;
- Volkman, Sarah K.
Publication type:
Article
Clonal Outbreak of Plasmodium falciparum Infection in Eastern Panama.
Published in:
Journal of Infectious Diseases, 2015, v. 211, n. 7, p. 1087, doi. 10.1093/infdis/jiu575
By:
- Obaldia III, Nicanor;
- Baro, Nicholas K.;
- Calzada, Jose E.;
- Santamaria, Ana M.;
- Daniels, Rachel;
- Wong, Wesley;
- Hsiao-Han Chang;
- Hamilton, Elizabeth J.;
- Arevalo-Herrera, Myriam;
- Herrera, Socrates;
- Wirth, Dyann F.;
- Hart, Daniel L.;
- Marti, Matthias;
- Volkman, Sarah K.
Publication type:
Article
Genetic background and PfKelch13 affect artemisinin susceptibility of PfCoronin mutants in Plasmodium falciparum.
Published in:
PLoS Genetics, 2020, v. 16, n. 12, p. 1, doi. 10.1371/journal.pgen.1009266
By:
- Sharma, Aabha I.;
- Shin, Sara H.;
- Bopp, Selina;
- Volkman, Sarah K.;
- Hartl, Daniel L.;
- Wirth, Dyann F.
Publication type:
Article
Harnessing genomics and genome biology to understand malaria biology.
Published in:
Nature Reviews Genetics, 2012, v. 13, n. 5, p. 315, doi. 10.1038/nrg3187
By:
- Volkman, Sarah K.;
- Neafsey, Daniel E.;
- Schaffner, Stephen F.;
- Park, Daniel J.;
- Wirth, Dyann F.
Publication type:
Article
De Novo Mutations Resolve Disease Transmission Pathways in Clonal Malaria.
Published in:
Molecular Biology & Evolution, 2018, v. 35, n. 7, p. 1678, doi. 10.1093/molbev/msy059
By:
- Redmond, Seth N;
- MacInnis, Bronwyn M;
- Bopp, Selina;
- Bei, Amy K;
- Ndiaye, Daouda;
- Hartl, Daniel L;
- Wirth, Dyann F;
- Volkman, Sarah K;
- Neafsey, Daniel E
Publication type:
Article
SNP Genotyping Identifies New Signatures of Selection in a Deep Sample of West African Plasmodium falciparum Malaria Parasites.
Published in:
Molecular Biology & Evolution, 2012, v. 29, n. 11, p. 3249, doi. 10.1093/molbev/mss151
By:
- Amambua-Ngwa, Alfred;
- Park, Daniel J.;
- Volkman, Sarah K.;
- Barnes, Kayla G.;
- Bei, Amy K.;
- Lukens, Amanda K.;
- Sene, Papa;
- Van Tyne, Daria;
- Ndiaye, Daouda;
- Wirth, Dyann F.;
- Conway, David J.;
- Neafsey, Daniel E.;
- Schaffner, Stephen F.
Publication type:
Article
Genomic Sequencing of Plasmodium falciparum Malaria Parasites from Senegal Reveals the Demographic History of the Population.
Published in:
Molecular Biology & Evolution, 2012, v. 29, n. 11, p. 3427, doi. 10.1093/molbev/mss161
By:
- Chang, Hsiao-Han;
- Park, Daniel J.;
- Galinsky, Kevin J.;
- Schaffner, Stephen F.;
- Ndiaye, Daouda;
- Ndir, Omar;
- Mboup, Souleymane;
- Wiegand, Roger C.;
- Volkman, Sarah K.;
- Sabeti, Pardis C.;
- Wirth, Dyann F.;
- Neafsey, Daniel E.;
- Hartl, Daniel L.
Publication type:
Article
Correction: A Systematic Map of Genetic Variation in Plasmodium falciparum.
Published in:
2006
By:
- Kidgell, Claire;
- Volkman, Sarah K.;
- Daily, Johanna;
- Borevitz, Justin O.;
- Plouffe, David;
- Zhou, Yingyao;
- Johnson, Jeffrey R.;
- Roch, Karine G. Le;
- Sarr, Ousmane;
- Ndir, Omar;
- Mboup, Soulyemane;
- Batalov, Serge;
- Wirth, Dyann F.;
- Winzeler, Elizabeth A.
Publication type:
Correction Notice
A Systematic Map of Genetic Variation in Plasmodium falciparum.
Published in:
PLoS Pathogens, 2006, v. 2, n. 6, p. e57, doi. 10.1371/journal.ppat.0020057
By:
- Kidgell, Claire;
- Volkman, Sarah K.;
- Daily, Johanna;
- Borevitz, Justin O.;
- Plouffe, David;
- Yingyao Zhou;
- Johnson, Jeffrey R.;
- Le Roch, Karine G.;
- Sarr, Ousmane;
- Ndir, Omar;
- Mboup, Soulyemane;
- Batalov, Serge;
- Wirth, Dyann F.;
- Winzeler, Elizabeth A.;
- Haldar, Kasturi
Publication type:
Article
Hybrid selection for sequencing pathogen genomes from clinical samples.
Published in:
Genome Biology, 2011, v. 12, n. 8, p. 1, doi. 10.1186/gb-2011-12-8-r73
By:
- Melnikov, Alexandre;
- Galinsky, Kevin;
- Rogov, Peter;
- Fennell, Timothy;
- Van Tyne, Daria;
- Russ, Carsten;
- Daniels, Rachel;
- Barnes, Kayla G;
- Bochicchio, James;
- Ndiaye, Daouda;
- Sene, Papa D;
- Wirth, Dyann F;
- Nusbaum, Chad;
- Volkman, Sarah K;
- Birren, Bruce W;
- Gnirke, Andreas;
- Neafsey, Daniel E
Publication type:
Article
Case report of Plasmodium ovale curtisi malaria in Sri Lanka: relevance for the maintenance of elimination status.
Published in:
2017
By:
- Gunawardena, Sharmini;
- Daniels, Rachel F.;
- Yahathugoda, Thishan C.;
- Weerasooriya, Mirani V.;
- Durfee, Katelyn;
- Volkman, Sarah K.;
- Wirth, Dyann F.;
- Karunaweera, Nadira D.
Publication type:
journal article
Low-Complexity Regions in Plasmodium falciparum: Missing Links in the Evolution of an Extreme Genome.
Published in:
Molecular Biology & Evolution, 2010, v. 27, n. 9, p. 2198, doi. 10.1093/molbev/msq108
By:
- Zilversmit, Martine M.;
- Volkman, Sarah K.;
- DePristo, Mark A.;
- Wirth, Dyann F.;
- Awadalla, Philip;
- Hartl, Daniel L.
Publication type:
Article
Gene Conversion as a Source of Nucleotide Diversity in Plasmodium falciparum.
Published in:
Molecular Biology & Evolution, 2003, v. 20, n. 5, p. 726, doi. 10.1093/molbev/msg076
By:
- Nielsen, Kaare M.;
- Kasper, Jacob;
- Choi, Mehee;
- Bedford, Trevor;
- Kristiansen, Kurt;
- Wirth, Dyann F.;
- Volkman, Sarah K.;
- Lozovsky, Elena R.;
- Hartl, Daniel L.
Publication type:
Article
High Plasmodium falciparum longitudinal prevalence is associated with high multiclonality and reduced clinical malaria risk in a seasonal transmission area of Mali.
Published in:
PLoS ONE, 2017, v. 12, n. 2, p. 1, doi. 10.1371/journal.pone.0170948
By:
- Adomako-Ankomah, Yaw;
- Chenoweth, Matthew S.;
- Durfee, Katelyn;
- Doumbia, Saibou;
- Konate, Drissa;
- Doumbouya, Mory;
- Keita, Abdoul S.;
- Nikolaeva, Daria;
- Tullo, Gregory S.;
- Anderson, Jennifer M.;
- Fairhurst, Rick M.;
- Daniels, Rachel;
- Volkman, Sarah K.;
- Diakite, Mahamadou;
- Miura, Kazutoyo;
- Long, Carole A.
Publication type:
Article
Evidence for Reduced Malaria Parasite Population after Application of Population-Level Antimalarial Drug Strategies in Southern Province, Zambia.
Published in:
American Journal of Tropical Medicine & Hygiene, 2020, v. 103, p. 66, doi. 10.4269/ajtmh.19-0666
By:
- Daniels, Rachel F.;
- Schaffner, Stephen F.;
- Bennett, Adam;
- Porter, Travis R.;
- Yukich, Joshua O.;
- Mulube, Conceptor;
- Mambwe, Brenda;
- Mwenda, Mulenga C.;
- Chishimba, Sandra;
- Bridges, Daniel J.;
- Moonga, Hawela;
- Hamainza, Busiku;
- Kawesha, Elizabeth Chizema;
- Miller, John M.;
- Steketee, Richard W.;
- Wirth, Dyann F.;
- Eisele, Thomas P.;
- Hartl, Daniel L.;
- Volkman, Sarah K.
Publication type:
Article
Adherence to Mass Drug Administration with Dihydroartemisinin-Piperaquine and Plasmodium falciparum Clearance in Southern Province, Zambia.
Published in:
American Journal of Tropical Medicine & Hygiene, 2020, v. 103, p. 37, doi. 10.4269/ajtmh.19-0667
By:
- Finn, Timothy P.;
- Porter, Travis R.;
- Moonga, Hawela;
- Silumbe, Kafula;
- Daniels, Rachel F.;
- Volkman, Sarah K.;
- Yukich, Joshua O.;
- Keating, Joseph;
- Bennett, Adam;
- Steketee, Richard W.;
- Miller, John M.;
- Eisele, Thomas P.
Publication type:
Article
Malaria Molecular Epidemiology: Lessons from the International Centers of Excellence for Malaria Research Network.
Published in:
American Journal of Tropical Medicine & Hygiene, 2015, v. 93, p. 79, doi. 10.4269/ajtmh.15-0005
By:
- Escalante, Ananias A.;
- Ferreira, Marcelo U.;
- Vinetz, Joseph M.;
- Volkman, Sarah K.;
- Liwang Cui;
- Gamboa, Dionicia;
- Krogstad, Donald J.;
- Barry, Alyssa E.;
- Carlton, Jane M.;
- van Eijk, Anna Maria;
- Pradhan, Khageswar;
- Mueller, Ivo;
- Greenhouse, Bryan;
- Pacheco, M. Andreina;
- Vallejo, Andres F.;
- Herrera, Socrates;
- Felger, Ingrid
Publication type:
Article
Population Genetics, Evolutionary Genomics, and Genome-Wide Studies of Malaria: A View across the International Centers of Excellence for Malaria Research.
Published in:
American Journal of Tropical Medicine & Hygiene, 2015, v. 93, p. 87, doi. 10.4269/ajtmh.15-0049
By:
- Carlton, Jane M.;
- Volkman, Sarah K.;
- Uplekar, Swapna;
- Hupalo, Daniel N.;
- Alves, João Marcelo Pereira;
- Liwang Cui;
- Donnelly, Martin;
- Roos, David S.;
- Harb, Omar S.;
- Acosta, Monica;
- Read, Andrew;
- Ribolla, Paulo E. M.;
- Singh, Om P.;
- Valecha, Neena;
- Wassmer, Samuel C.;
- Ferreira, Marcelo;
- Escalante, Ananias A.
Publication type:
Article
Artemisinin resistance without pfkelch13 mutations in Plasmodium falciparum isolates from Cambodia.
Published in:
Malaria Journal, 2017, v. 16, p. 1, doi. 10.1186/s12936-017-1845-5
By:
- Mukherjee, Angana;
- Bopp, Selina;
- Magistrado, Pamela;
- Wong, Wesley;
- Daniels, Rachel;
- Demas, Allison;
- Schafner, Stephen;
- Amaratunga, Chanaki;
- Lim, Pharath;
- Dhorda, Mehul;
- Miotto, Olivo;
- Woodrow, Charles;
- Ashley, Elizabeth A.;
- Dondorp, Arjen M.;
- White, Nicholas J.;
- Wirth, Dyann;
- Fairhurst, Rick;
- Volkman, Sarah K.
Publication type:
Article
High resolution melting: a useful field-deployable method to measure dhfr and dhps drug resistance in both highly and lowly endemic Plasmodium populations.
Published in:
Malaria Journal, 2017, v. 16, p. 1, doi. 10.1186/s12936-017-1811-2
By:
- Ndiaye, Yaye Dié;
- Diédhiou, Cyrille K.;
- Bei, Amy K.;
- Dieye, Baba;
- Mbaye, Aminata;
- Mze, Nasserdine Papa;
- Daniels, Rachel F.;
- Ndiaye, Ibrahima M.;
- Déme, Awa B.;
- Gaye, Amy;
- Sy, Mouhamad;
- Ndiaye, Tolla;
- Badiane, Aida S.;
- Ndiaye, Mouhamadou;
- Premji, Zul;
- Wirth, Dyann F.;
- Mboup, Souleymane;
- Krogstad, Donald;
- Volkman, Sarah K.;
- Ahouidi, Ambroise D.
Publication type:
Article
Evidence of non-Plasmodium falciparum malaria infection in Kédougou, Sénégal.
Published in:
Malaria Journal, 2017, v. 16, p. 1, doi. 10.1186/s12936-016-1661-3
By:
- Daniels, Rachel F.;
- Bineta Deme, Awa;
- Gomis, Jules F.;
- Dieye, Baba;
- Durfee, Katelyn;
- Thwing, Julie I.;
- Fall, Fatou B.;
- Ba, Mady;
- Ndiop, Medoune;
- Badiane, Aida S.;
- Die Ndiaye, Yaye;
- Wirth, Dyann F.;
- Volkman, Sarah K.;
- Ndiaye, Daouda
Publication type:
Article
Genetic evidence that the Makira region in northeastern Madagascar is a hotspot of malaria transmission.
Published in:
Malaria Journal, 2016, v. 15, p. 1, doi. 10.1186/s12936-016-1644-4
By:
- Rice, Benjamin L.;
- Golden, Christopher D.;
- Gasta Anjaranirina, Evelin Jean;
- Botelho, Carolina Mastella;
- Volkman, Sarah K.;
- Hartl, Daniel L.
Publication type:
Article
Plasmepsin II–III copy number accounts for bimodal piperaquine resistance among Cambodian Plasmodium falciparum.
Published in:
Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-04104-z
By:
- Bopp, Selina;
- Magistrado, Pamela;
- Wong, Wesley;
- Schaffner, Stephen F.;
- Mukherjee, Angana;
- Lim, Pharath;
- Dhorda, Mehul;
- Amaratunga, Chanaki;
- Woodrow, Charles J.;
- Ashley, Elizabeth A.;
- White, Nicholas J.;
- Dondorp, Arjen M.;
- Fairhurst, Rick M.;
- Ariey, Frederic;
- Menard, Didier;
- Wirth, Dyann F.;
- Volkman, Sarah K.
Publication type:
Article
Host-mediated selection impacts the diversity of Plasmodium falciparum antigens within infections.
Published in:
Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-03807-7
By:
- Early, Angela M.;
- MacInnis, Bronwyn L.;
- Wirth, Dyann F.;
- Neafsey, Daniel E.;
- Volkman, Sarah K.;
- Asante, Kwaku Poku;
- Sorgho, Hermann;
- Tinto, Halidou;
- Valea, Innocent;
- Lievens, Marc;
- Ockenhouse, Christian F.;
- Adjei, Samuel;
- Agbenyega, Tsiri;
- Ansong, Daniel;
- Gondi, Stacey;
- Otieno, Walter;
- Tina, Lucas;
- Greenwood, Brian;
- Owusu-Agyei, Seth;
- Hamel, Mary
Publication type:
Article
Characterization of Plasmodium falciparum structure in Nigeria with malaria SNPs barcode.
Published in:
Malaria Journal, 2018, v. 17, n. 1, p. N.PAG, doi. 10.1186/s12936-018-2623-8
By:
- Bankole, Bolajoko E.;
- Kayode, Adeyemi T.;
- Nosamiefan, Iguosadolo O.;
- Eromon, Philomena;
- Baniecki, Mary L.;
- Daniels, Rachel F.;
- Hamilton, Elizabeth J.;
- Durfee, Katelyn;
- MacInnis, Bronwyn;
- Okafor, Henrietta;
- Sowunmi, Akintunde;
- Volkman, Sarah K.;
- Sabeti, Pardis;
- Wirth, Dyann;
- Happi, Christian T.;
- Folarin, Onikepe A.
Publication type:
Article
Malaria prevalence, prevention and treatment seeking practices among nomadic pastoralists in northern Senegal.
Published in:
Malaria Journal, 2017, v. 16, p. 1, doi. 10.1186/s12936-017-2055-x
By:
- Mame Cheikh Seck;
- Thwing, Julie;
- Fatou Ba Fall;
- Gomis, Jules Francois;
- Awa Deme;
- Yaye Die Ndiaye;
- Daniels, Rachel;
- Volkman, Sarah K.;
- Medoune Ndiop;
- Mady Ba;
- Daouda Ndiaye
Publication type:
Article
Cohort Profile: The Madagascar Health and Environmental Research (MAHERY) study in north-eastern Madagascar.
Published in:
2017
By:
- Golden, Christopher D.;
- Anjaranirina, Evelin Jean Gasta;
- Fernald, Lia C. H.;
- Hartl, Daniel L.;
- Kremen, Claire;
- Milner Jr, Danny A.;
- Ralalason, Dera H.;
- Ramihantaniarivo, Herlyne;
- Randriamady, Hervet;
- Rice, Benjamin L.;
- Vaitla, Bapu;
- Volkman, Sarah K.;
- Vonona, Miadana Arisoa;
- Myers, Samuel S.;
- Milner, Danny A Jr
Publication type:
journal article
Molecular assays for antimalarial drug resistance surveillance: A target product profile.
Published in:
PLoS ONE, 2018, v. 13, n. 9, p. 1, doi. 10.1371/journal.pone.0204347
By:
- Nsanzabana, Christian;
- Ariey, Frederic;
- Beck, Hans-Peter;
- Ding, Xavier C.;
- Kamau, Edwin;
- Krishna, Sanjeev;
- Legrand, Eric;
- Lucchi, Naomi;
- Miotto, Olivo;
- Nag, Sidsel;
- Noedl, Harald;
- Roper, Cally;
- Rosenthal, Philip J.;
- Schallig, Henk D. F. H.;
- Taylor, Steve M.;
- Volkman, Sarah K.;
- Gonzalez, Iveth J.
Publication type:
Article
Dramatic Changes in Malaria Population Genetic Complexity in Dielmo and Ndiop, Senegal, Revealed Using Genomic Surveillance.
Published in:
2018
By:
- Bei, Amy K.;
- Niang, Makhtar;
- Deme, Awa B.;
- Daniels, Rachel F.;
- Sarr, Fatoumata D.;
- Sokhna, Cheikh;
- Talla, Cheikh;
- Faye, Joseph;
- Diagne, Nafissatou;
- Doucoure, Souleymane;
- Mboup, Souleymane;
- Wirth, Dyann F.;
- Tall, Adama;
- Ndiaye, Daouda;
- Hartl, Daniel L.;
- Volkman, Sarah K.;
- Toure-Balde, Aissatou
Publication type:
journal article
RDTs as a source of DNA to study Plasmodium falciparum drug resistance in isolates from Senegal and the Comoros Islands.
Published in:
Malaria Journal, 2015, v. 14, n. 1, p. 1, doi. 10.1186/s12936-015-0861-6
By:
- Mze, Nasserdine Papa;
- Ndiaye, Yaye Die;
- Diedhiou, Cyrille K.;
- Rahamatou, Silai;
- Dieye, Baba;
- Daniels, Rachel F.;
- Hamilton, Elizabeth J.;
- Diallo, Mouhamadou;
- Bei, Amy K.;
- Wirth, Dyann F.;
- Mboup, Souleymane;
- Volkman, Sarah K.;
- Ahouidi, Ambroise D.;
- Ndiaye, Daouda
Publication type:
Article
COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data.
Published in:
Malaria Journal, 2015, v. 14, n. 1, p. 1, doi. 10.1186/1475-2875-14-4
By:
- Galinsky, Kevin;
- Valim, Clarissa;
- Salmier, Arielle;
- de Thoisy, Benoit;
- Musset, Lise;
- Legrand, Eric;
- Faust, Aubrey;
- Baniecki, Mary Lynn;
- Ndiaye, Daouda;
- Daniels, Rachel F.;
- Hartl, Daniel L.;
- Sabeti, Pardis C.;
- Wirth, Dyann F.;
- Volkman, Sarah K.;
- Neafsey, Daniel E.
Publication type:
Article
COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data.
Published in:
Malaria Journal, 2015, v. 14, n. 1, p. 69, doi. 10.1186/1475-2875-14-4
By:
- Galinsky, Kevin;
- Valim, Clarissa;
- Salmier, Arielle;
- de Thoisy, Benoit;
- Musset, Lise;
- Legrand, Eric;
- Faust, Aubrey;
- Baniecki, Mary Lynn;
- Ndiaye, Daouda;
- Daniels, Rachel F.;
- Hartl, Daniel L.;
- Sabeti, Pardis C.;
- Wirth, Dyann F.;
- Volkman, Sarah K.;
- Neafsey, Daniel E.
Publication type:
Article
Pre-amplification methods for tracking low-grade Plasmodium falciparum populations during scaled-up interventions in Southern Zambia.
Published in:
Malaria Journal, 2014, v. 13, n. 1, p. 1, doi. 10.1186/1475-2875-13-89
By:
- Mharakurwa, Sungano;
- Daniels, Rachel;
- Scott, Alan;
- Wirth, Dyann F.;
- Thuma, Philip;
- Volkman, Sarah K.
Publication type:
Article
Analysis of pfhrp2 genetic diversity in Senegal and implications for use of rapid diagnostic tests.
Published in:
Malaria Journal, 2014, v. 13, n. 1, p. 1, doi. 10.1186/1475-2875-13-34
By:
- Deme, Awa B.;
- Park, Daniel J.;
- Bei, Amy K.;
- Sarr, Ousmane;
- Badiane, Aida Sadikh;
- Gueye, Papa El Hadji Omar;
- Ahouidi, Ambroise;
- Ndir, Omar;
- Mboup, Souleymane;
- Wirth, Dyann F.;
- Ndiaye, Daouda Daouda;
- Volkman, Sarah K.
Publication type:
Article
Changes in drug sensitivity and anti-malarial drug resistance mutations over time among Plasmodium falciparum parasites in Senegal.
Published in:
Malaria Journal, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2875-12-441
By:
- Van Tyne, Daria;
- Dieye, Baba;
- Valim, Clarissa;
- Daniels, Rachel F.;
- Sène, Papa Diogoye;
- Lukens, Amanda K.;
- Ndiaye, Mouhamadou;
- Bei, Amy K.;
- Yaye Die Ndiaye;
- Hamilton, Elizabeth J.;
- Ndir, Omar;
- Mboup, Souleymane;
- Volkman, Sarah K.;
- Wirth, Dyann F.;
- Ndiaye, Daouda
Publication type:
Article
Genetic relatedness analysis reveals the cotransmission of genetically related Plasmodium falciparum parasites in Thiès, Senegal.
Published in:
Genome Medicine, 2017, v. 9, p. 1, doi. 10.1186/s13073-017-0398-0
By:
- Wong, Wesley;
- Griggs, Allison D.;
- Daniels, Rachel F.;
- Schaffner, Stephen F.;
- Ndiaye, Daouda;
- Bei, Amy K.;
- Deme, Awa B.;
- MacInnis, Bronwyn;
- Volkman, Sarah K.;
- Hartl, Daniel L.;
- Neafsey, Daniel E.;
- Wirth, Dyann F.
Publication type:
Article

Found: 53