Works by Vogel, Jörg

Results: 190

Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation.

Published in:

Nature Structural & Molecular Biology, 2009, v. 16, n. 8, p. 840, doi. 10.1038/nsmb.1631

By:

Pfeiffer, Verena;
Papenfort, Kai;
Lucchini, Sacha;
Hinton, Jay C. D.;
Vogel, Jörg

Publication type:

Article

Dual RNA-seq of pathogen and host.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 9, p. 618, doi. 10.1038/nrmicro2852

By:

Westermann, Alexander J.;
Gorski, Stanislaw A.;
Vogel, Jörg

Publication type:

Article

Hfq and its constellation of RNA.

Published in:

Nature Reviews Microbiology, 2011, v. 9, n. 8, p. 578, doi. 10.1038/nrmicro2615

By:

Vogel, Jörg;
Luisi, Ben F.

Publication type:

Article

READemption—a tool for the computational analysis of deep-sequencing–based transcriptome data.

Published in:

Bioinformatics, 2014, v. 30, n. 23, p. 3421, doi. 10.1093/bioinformatics/btu533

By:

Förstner, Konrad U.;
Vogel, Jörg;
Sharma, Cynthia M.

Publication type:

Article

Primary Transcriptome of Barley Chloroplasts: Numerous Noncoding RNAs and the Dominating Role of the Plastid-Encoded RNA Polymerase.

Published in:

Plant Cell, 2012, v. 24, n. 1, p. 123, doi. 10.1105/tpc.111.089441

By:

Zhelyazkova, Petya;
Sharma, Cynthia M.;
Förstner, Konrad U.;
Liere, Karsten;
Vogel, Jörg;
Börner, Thomas

Publication type:

Article

Quantifying permafrost patterns using Minkowski densities.

Published in:

Permafrost & Periglacial Processes, 2005, v. 16, n. 3, p. 277, doi. 10.1002/ppp.531

By:

Roth, Kurt;
Boike, Julia;
Vogel, Hans-Jörg

Publication type:

Article

Meeting report 'Microbiology 2023: from single cell to microbiome and host', an international interacademy conference in Würzburg.

Published in:

MicroLife, 2024, v. 5, p. 1, doi. 10.1093/femsml/uqae008

By:

Cossart, Pascale;
Hacker, Jörg;
Holden, David H;
Vogel, Jörg

Publication type:

Article

Refining the transcriptional landscapes for distinct clades of virulent phages infecting Pseudomonas aeruginosa.

Published in:

MicroLife, 2024, v. 5, p. 1, doi. 10.1093/femsml/uqae002

By:

Putzeys, Leena;
Wicke, Laura;
Boon, Maarten;
van Noort, Vera;
Vogel, Jörg;
Lavigne, Rob

Publication type:

Article

EAM highlights in FEMS 2023: from the Petri dish to planet Earth.

Published in:

MicroLife, 2023, v. 4, p. 1, doi. 10.1093/femsml/uqad045

By:

Vogel, Jörg;
de Lorenzo, Victor

Publication type:

Article

Grad-seq analysis of Enterococcus faecalis and Enterococcus faecium provides a global view of RNA and protein complexes in these two opportunistic pathogens.

Published in:

MicroLife, 2023, v. 4, p. 1, doi. 10.1093/femsml/uqac027

By:

Michaux, Charlotte;
Gerovac, Milan;
Hansen, Elisabeth E;
Barquist, Lars;
Vogel, Jörg

Publication type:

Article

Ushering in a new era of single-cell transcriptomics in bacteria.

Published in:

MicroLife, 2022, v. 3, p. N.PAG, doi. 10.1093/femsml/uqac020

By:

Homberger, Christina;
Barquist, Lars;
Vogel, Jörg

Publication type:

Article

Grad-seq identifies KhpB as a global RNA-binding protein in Clostridioides difficile that regulates toxin production.

Published in:

MicroLife, 2021, v. 2, p. 1, doi. 10.1093/femsml/uqab004

By:

Lamm-Schmidt, Vanessa;
Fuchs, Manuela;
Sulzer, Johannes;
Gerovac, Milan;
Hör, Jens;
Dersch, Petra;
Vogel, Jörg;
Faber, Franziska

Publication type:

Article

A global data-driven census of Salmonella small proteins and their potential functions in bacterial virulence.

Published in:

MicroLife, 2020, v. 1, n. 1, p. 1, doi. 10.1093/femsml/uqaa002

By:

Venturini, Elisa;
Svensson, Sarah L.;
Maaß, Sandra;
Gelhausen, Rick;
Eggenhofer, Florian;
Lei Li;
Cain, Amy K.;
Parkhill, Julian;
Becher, Dörte;
Backofen, Rolf;
Barquist, Lars;
Sharma, Cynthia M.;
Westermann, Alexander J.;
Vogel, Jörg

Publication type:

Article

Amidochelocardin Overcomes Resistance Mechanisms Exerted on Tetracyclines and Natural Chelocardin.

Published in:

Antibiotics (2079-6382), 2020, v. 9, n. 9, p. 619, doi. 10.3390/antibiotics9090619

By:

Hennessen, Fabienne;
Miethke, Marcus;
Zaburannyi, Nestor;
Loose, Maria;
Lukežič, Tadeja;
Bernecker, Steffen;
Hüttel, Stephan;
Jansen, Rolf;
Schmiedel, Judith;
Fritzenwanker, Moritz;
Imirzalioglu, Can;
Vogel, Jörg;
Westermann, Alexander J.;
Hesterkamp, Thomas;
Stadler, Marc;
Wagenlehner, Florian;
Petković, Hrvoje;
Herrmann, Jennifer;
Müller, Rolf

Publication type:

Article

Microscale carbon distribution around pores and particulate organic matter varies with soil moisture regime.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29605-w

By:

Schlüter, Steffen;
Leuther, Frederic;
Albrecht, Lukas;
Hoeschen, Carmen;
Kilian, Rüdiger;
Surey, Ronny;
Mikutta, Robert;
Kaiser, Klaus;
Mueller, Carsten W.;
Vogel, Hans-Jörg

Publication type:

Article

A Candidate Approach Implicates the Secreted Salmonella Effector Protein SpvB in P-Body Disassembly.

Published in:

PLoS ONE, 2011, v. 6, n. 3, p. 1, doi. 10.1371/journal.pone.0017296

By:

Eulalio, Ana;
Fröhlich, Kathrin S.;
Mano, Miguel;
Giacca, Mauro;
Vogel, Jörg

Publication type:

Article

RNA‐based medicine: from molecular mechanisms to therapy.

Published in:

EMBO Journal, 2023, v. 42, n. 21, p. 1, doi. 10.15252/embj.2023114760

By:

Sparmann, Anke;
Vogel, Jörg

Publication type:

Article

Grad‐seq in a Gram‐positive bacterium reveals exonucleolytic sRNA activation in competence control.

Published in:

EMBO Journal, 2020, v. 39, n. 9, p. 1, doi. 10.15252/embj.2019103852

By:

Hör, Jens;
Garriss, Geneviève;
Di Giorgio, Silvia;
Hack, Lisa‐Marie;
Vanselow, Jens T;
Förstner, Konrad U;
Schlosser, Andreas;
Henriques‐Normark, Birgitta;
Vogel, Jörg

Publication type:

Article

Stress‐induced host membrane remodeling protects from infection by non‐motile bacterial pathogens.

Published in:

EMBO Journal, 2018, v. 37, n. 23, p. N.PAG, doi. 10.15252/embj.201798529

By:

Tawk, Caroline;
Nigro, Giulia;
Rodrigues Lopes, Ines;
Aguilar, Carmen;
Lisowski, Clivia;
Mano, Miguel;
Sansonetti, Philippe;
Vogel, Jörg;
Eulalio, Ana

Publication type:

Article

Nuclear lncRNA stabilization in the host response to bacterial infection.

Published in:

EMBO Journal, 2018, v. 37, n. 13, p. 1, doi. 10.15252/embj.201899875

By:

Munschauer, Mathias;
Vogel, Jörg

Publication type:

Article

Molecular mechanism of mRNA repression in trans by a ProQ-dependent small RNA.

Published in:

EMBO Journal, 2017, v. 36, n. 8, p. 1029, doi. 10.15252/embj.201696127

By:

Smirnov, Alexandre;
Wang, Chuan;
Drewry, Lisa L;
Vogel, Jörg

Publication type:

Article

Global snapshots of bacterial RNA networks.

Published in:

EMBO Journal, 2017, v. 36, n. 3, p. 245, doi. 10.15252/embj.201696072

By:

Hör, Jens;
Vogel, Jörg

Publication type:

Article

Tracheal brush cells release acetylcholine in response to bitter tastants for paracrine and autocrine signaling.

Published in:

FASEB Journal, 2020, v. 34, n. 1, p. 316, doi. 10.1096/fj.201901314RR

By:

Hollenhorst, Monika I.;
Jurastow, Innokentij;
Nandigama, Rajender;
Appenzeller, Silke;
Li, Lei;
Vogel, Jörg;
Wiederhold, Stephanie;
Althaus, Mike;
Empting, Martin;
Altmüller, Janine;
Hirsch, Anna K. H.;
Flockerzi, Veit;
Canning, Brendan J.;
Saliba, Antoine‐Emmanuel;
Krasteva‐Christ, Gabriela

Publication type:

Article

How to find small non-coding RNAs in bacteria.

Published in:

Biological Chemistry, 2005, v. 386, n. 12, p. 1219, doi. 10.1515/BC.2005.140

By:

Vogel, Jörg;
Sharma, Cynthia Mira

Publication type:

Article

Soil hydraulic conductivity in the state of nonequilibrium.

Published in:

Vadose Zone Journal, 2023, v. 22, n. 2, p. 1, doi. 10.1002/vzj2.20238

By:

Vogel, Hans‐Jörg;
Gerke, Horst H.;
Mietrach, Robert;
Zahl, René;
Wöhling, Thomas

Publication type:

Article

Tracing lateral subsurface flow in layered soils by undisturbed monolith sampling, targeted laboratory experiments, and model‐based analysis.

Published in:

Vadose Zone Journal, 2022, v. 21, n. 4, p. 1, doi. 10.1002/vzj2.20206

By:

Ehrhardt, Annelie;
Berger, Kristian;
Filipović, Vilim;
Wöhling, Thomas;
Vogel, Hans‐Jörg;
Gerke, Horst H.

Publication type:

Article

New Sensor Technology for Field‐Scale Quantification of Carbon Dioxide in Soil.

Published in:

Vadose Zone Journal, 2019, v. 18, n. 1, p. 1, doi. 10.2136/vzj2019.01.0007

By:

Lazik, Detlef;
Vetterlein, Doris;
Salas, Simone Kilian;
Sood, Pramit;
Apelt, Bernd;
Vogel, Hans‐Jörg

Publication type:

Article

Scale Issues in Soil Hydrology.

Published in:

Vadose Zone Journal, 2019, v. 18, n. 1, p. 1, doi. 10.2136/vzj2019.01.0001

By:

Vogel, Hans‐Jörg

Publication type:

Article

Quantitative Analysis of Water Infiltration in Soil Cores Using X‐Ray.

Published in:

Vadose Zone Journal, 2018, v. 17, n. 1, p. 1, doi. 10.2136/vzj2016.12.0136

By:

Weller, Ulrich;
Leuther, Frederic;
Schlüter, Steffen;
Vogel, Hans-Jörg

Publication type:

Article

Quantification of Gas-Phase Trapping within the Capillary Fringe Using Computed Microtomography.

Published in:

2015

By:

Mohammadian, Sadjad;
Geistlinger, Helmut;
Vogel, Hans-Jörg

Publication type:

Abstract

Dynamic Processes in Capillary Fringes.

Published in:

Vadose Zone Journal, 2015, v. 14, n. 5, p. 1, doi. 10.2136/vzj2015.04.0059

By:

Winter, Josef;
Ippisch, Olaf;
Vogel, Hans-Jörg

Publication type:

Article

In Situ Visualization and Quantification of Three-Dimensional Root System Architecture and Growth Using X-Ray Computed Tomography.

Published in:

Vadose Zone Journal, 2014, v. 13, p. 4, doi. 10.2136/vzj2014.03.0024

By:

Koebernick, Nicolai;
Weller, Ulrich;
Huber, Katrin;
Schlüter, Steffen;
Vogel, Hans-Jörg;
Jahn, Reinhold;
Vereecken, Harry;
Vetterlein, Doris

Publication type:

Article

Virtual Soils: Moisture Measurements and Their Interpretation by Inverse Modeling.

Published in:

Vadose Zone Journal, 2013, v. 12, n. 3, p. 1, doi. 10.2136/vzj2012.0168

By:

Schelle, Henrike;
Durner, Wolfgang;
Schlüter, Stefen;
Vogel, Hans-Jörg;
Vanderborght, Jan

Publication type:

Article

Virtual Soils: Assessment of the Effects of Soil Structure on the Hydraulic Behavior of Cultivated Soils.

Published in:

Vadose Zone Journal, 2012, v. 11, n. 4, p. 21, doi. 10.2136/vzj2011.0174

By:

Schlüter, Steffen;
Vogel, Hans-Jörg;
Ippisch, Olaf;
Bastian, Peter;
Roth, Kurt;
Schelle, Henrike;
Durner, Wolfgang;
Kasteel, Roy;
Vanderborght, Jan

Publication type:

Article

Conductivity and Hydraulic Nonequilibrium across Drainage and Infiltration Fronts.

Published in:

Vadose Zone Journal, 2012, v. 11, n. 3, p. 14, doi. 10.2136/vzj2011.0134

By:

Weller, Ulrich;
Vogel, Hans-Jörg

Publication type:

Article

Is the Rhizosphere Temporarily Water Repellent?

Published in:

Vadose Zone Journal, 2012, v. 11, n. 3, p. 7, doi. 10.2136/vzj2011.0120

By:

Moradi, Ahmad B.;
Carminati, Andrea;
Lamparter, Axel;
Woche, Susanne K.;
Bachmann, Jörg;
Vetterlein, Doris;
Hans-Jörg Vogel;
Oswald, Sascha E.

Publication type:

Article

Predicting Solute Transport in Structured Soil Using Pore Network Models.

Published in:

Vadose Zone Journal, 2011, v. 10, n. 3, p. 24

By:

Köhne, J. Maximilian;
Schlüter, Steffen;
Vogel, Hans-Jörg

Publication type:

Article

How the Rhizosphere May Favor Water Availability to Roots.

Published in:

Vadose Zone Journal, 2011, v. 10, n. 3, p. 16, doi. 10.2136/vzj2010.0113

By:

Carminati, Andrea;
Schneider, Christoph L.;
Moradi, Ahmad B.;
Zarebanadkouki, Mohsen;
Vetterlein, Doris;
Vogel, Hans-Jörg;
Hildebrandt, Anke;
Weller, Ulrich;
Schüler, Lennart;
Oswald, Sascha E.

Publication type:

Article

Direct Measurement of Unsaturated Conductivity including Hydraulic Nonequilibrium and Hysteresis.

Published in:

Vadose Zone Journal, 2011, v. 10, n. 2, p. 654, doi. 10.2136/vzj2010.0074

By:

Weller, Ulrich;
Ippisch, Olaf;
Köhne, Max;
Vogel, Hans-Jörg

Publication type:

Article

When Roots Lose Contact.

Published in:

Vadose Zone Journal, 2009, p. 9, doi. 10.2136/vzj2008.0147

By:

Carminati, Andrea;
Vetterlein, Doris;
Weller, Ulrich;
Vogel, Hans-Jörg;
Oswald, Sascha E.

Publication type:

Article

Alexander Böhm (1971-2012).

Published in:

Molecular Microbiology, 2013, v. 88, n. 2, p. 219, doi. 10.1111/mmi.12198

By:

Boos, Winfried;
Parkinson, John S.;
Jenal, Urs;
Vogel, Jörg;
Søgaard‐Andersen, Lotte

Publication type:

Article

Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA.

Published in:

Molecular Microbiology, 2012, v. 84, n. 3, p. 428, doi. 10.1111/j.1365-2958.2012.08031.x

By:

Corcoran, Colin P.;
Podkaminski, Dimitri;
Papenfort, Kai;
Urban, Johannes H.;
Hinton, Jay C. D.;
Vogel, Jörg

Publication type:

Article

The csgD mRNA as a hub for signal integration via multiple small RNAs.

Published in:

Molecular Microbiology, 2012, v. 84, n. 1, p. 1, doi. 10.1111/j.1365-2958.2012.08033.x

By:

Boehm, Alex;
Vogel, Jörg

Publication type:

Article

Microbes at their best: first Mol Micro Meeting Würzburg.

Published in:

2011

By:

Böhm, Alex;
Papenfort, Kai;
Lopez, Daniel;
Vogel, Jörg

Publication type:

Other

Pervasive post-transcriptional control of genes involved in amino acid metabolism by the Hfq-dependent GcvB small RNA.

Published in:

Molecular Microbiology, 2011, v. 81, n. 5, p. 1144, doi. 10.1111/j.1365-2958.2011.07751.x

By:

Sharma, Cynthia M.;
Papenfort, Kai;
Pernitzsch, Sandy R.;
Mollenkopf, Hans-Joachim;
Hinton, Jay C. D.;
Vogel, Jörg

Publication type:

Article

Contribution of Hfq to photooxidative stress resistance and global regulation in Rhodobacter sphaeroides.

Published in:

Molecular Microbiology, 2011, v. 80, n. 6, p. 1479, doi. 10.1111/j.1365-2958.2011.07658.x

By:

Berghoff, Bork A.;
Glaeser, Jens;
Sharma, Cynthia M.;
Zobawa, Monica;
Lottspeich, Friedrich;
Vogel, Jörg;
Klug, Gabriele

Publication type:

Article

Small RNAs promote mRNA stability to activate the synthesis of virulence factors.

Published in:

Molecular Microbiology, 2010, v. 78, n. 6, p. 1327, doi. 10.1111/j.1365-2958.2010.07428.x

By:

Podkaminski, Dimitri;
Vogel, Jörg

Publication type:

Article

Photooxidative stress-induced and abundant small RNAs in Rhodobacter sphaeroides.

Published in:

Molecular Microbiology, 2009, v. 74, n. 6, p. 1497, doi. 10.1111/j.1365-2958.2009.06949.x

By:

Berghoff, Bork A.;
Glaeser, Jens;
Sharma, Cynthia M.;
Vogel, Jörg;
Klug, Gabriele

Publication type:

Article

Regulatory RNAs in prokaryotes: here, there and everywhere.

Published in:

2009

By:

Narberhaus, Franz;
Vogel, Jörg

Publication type:

Other

Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA.

Published in:

Molecular Microbiology, 2009, v. 74, n. 1, p. 139, doi. 10.1111/j.1365-2958.2009.06857.x

By:

Papenfort, Kai;
Said, Nelly;
Welsink, Tim;
Lucchini, Sacha;
Hinton, Jay C. D.;
Vogel, Jörg

Publication type:

Article