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Echinobase: a resource to support the echinoderm research community.
- Published in:
- Genetics, 2024, v. 227, n. 1, p. 1, doi. 10.1093/genetics/iyae002
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- Publication type:
- Article
Xenbase: key features and resources of the Xenopus model organism knowledgebase.
- Published in:
- Genetics, 2023, v. 224, n. 1, p. 1, doi. 10.1093/genetics/iyad018
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- Publication type:
- Article
Embryonic and aglomerular kidney development in the bay pipefish, Syngnathus leptorhynchus.
- Published in:
- PLoS ONE, 2022, v. 17, n. 5, p. 1, doi. 10.1371/journal.pone.0267932
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- Publication type:
- Article
The Xenopus phenotype ontology: bridging model organism phenotype data to human health and development.
- Published in:
- BMC Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12859-022-04636-8
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- Publication type:
- Article
Echinobase: leveraging an extant model organism database to build a knowledgebase supporting research on the genomics and biology of echinoderms.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. D1, p. D970, doi. 10.1093/nar/gkab1005
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- Publication type:
- Article
Integration of 1:1 orthology maps and updated datasets into Echinobase.
- Published in:
- Database: The Journal of Biological Databases & Curation, 2021, v. 2021, p. 1, doi. 10.1093/database/baab030
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- Publication type:
- Article
Xenbase: deep integration of GEO & SRA RNA-seq and ChIP-seq data in a model organism database.
- Published in:
- Nucleic Acids Research, 2020, v. 48, n. D1, p. D776, doi. 10.1093/nar/gkz933
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- Publication type:
- Article
Seasonal temperature, the lunar cycle and diurnal rhythms interact in a combinatorial manner to modulate genomic responses to the environment in a reef‐building coral.
- Published in:
- Molecular Ecology, 2019, v. 28, n. 16, p. 3629, doi. 10.1111/mec.15173
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- Publication type:
- Article
Xenbase: Facilitating the Use of Xenopus to Model Human Disease.
- Published in:
- Frontiers in Physiology, 2019, p. N.PAG, doi. 10.3389/fphys.2019.00154
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- Publication type:
- Article
Distinguishing Species Using GC Contents in Mixed DNA or RNA Sequences.
- Published in:
- Evolutionary Bioinformatics, 2018, n. 14, p. 1, doi. 10.1177/1176934318788866
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- Publication type:
- Article
Transcriptome dynamics over a lunar month in a broadcast spawning acroporid coral.
- Published in:
- Molecular Ecology, 2017, v. 26, n. 9, p. 2514, doi. 10.1111/mec.14043
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- Publication type:
- Article
Database and Informatic Challenges in Representing Both Diploid and Tetraploid Xenopus Species in Xenbase.
- Published in:
- Cytogenetic & Genome Research, 2015, v. 145, n. 3/4, p. 278, doi. 10.1159/000430427
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- Publication type:
- Article
Model organism databases.
- Published in:
- 2015
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- Publication type:
- Editorial
Xenbase: Core features, data acquisition, and data processing.
- Published in:
- Genesis: The Journal of Genetics & Development, 2015, v. 53, n. 8, p. 486, doi. 10.1002/dvg.22873
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- Publication type:
- Article
Xenbase, the Xenopus model organism database; new virtualized system, data types and genomes.
- Published in:
- Nucleic Acids Research, 2015, v. 43, n. D1, p. D756, doi. 10.1093/nar/gku956
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- Publication type:
- Article
Separate Introns Gained within Short and Long Soluble Peridinin-Chlorophyll a-Protein Genes during Radiation of Symbiodinium (Dinophyceae) Clade A and B Lineages.
- Published in:
- PLoS ONE, 2014, v. 9, n. 10, p. 1, doi. 10.1371/journal.pone.0110608
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- Publication type:
- Article
The Virtual Xenbase: transitioning an online bioinformatics resource to a private cloud.
- Published in:
- Database: The Journal of Biological Databases & Curation, 2014, v. 2014, p. 1, doi. 10.1093/database/bau108
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- Publication type:
- Article
Enhanced XAO: the ontology of Xenopus anatomy and development underpins more accurate annotation of gene expression and queries on Xenbase.
- Published in:
- Journal of Biomedical Semantics, 2013, v. 4, n. 1, p. 1, doi. 10.1186/2041-1480-4-31
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- Publication type:
- Article
mRNA fluorescence in situ hybridization to determine overlapping gene expression in whole-mount mouse embryos.
- Published in:
- Developmental Dynamics, 2013, v. 242, n. 9, p. 1094, doi. 10.1002/dvdy.23993
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- Publication type:
- Article
Ecological Complexity of Coral Recruitment Processes: Effects of Invertebrate Herbivores on Coral Recruitment and Growth Depends Upon Substratum Properties and Coral Species.
- Published in:
- PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0072830
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- Publication type:
- Article
The Xenbase literature curation process.
- Published in:
- Database: The Journal of Biological Databases & Curation, 2013, v. 2013, p. 1, doi. 10.1093/database/bas046
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- Publication type:
- Article
Xenbase: expansion and updates of the Xenopus model organism database.
- Published in:
- Nucleic Acids Research, 2013, v. 41, n. 1, p. D865, doi. 10.1093/nar/gks1025
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- Publication type:
- Article
Circadian Cycles of Gene Expression in the Coral, Acropora millepora.
- Published in:
- PLoS ONE, 2011, v. 6, n. 9, p. 1, doi. 10.1371/journal.pone.0025072
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- Publication type:
- Article
Non-canonical wnt signals antagonize and canonical wnt signals promote cell proliferation in early kidney development.
- Published in:
- Developmental Dynamics, 2011, v. 240, n. 6, p. 1558, doi. 10.1002/dvdy.22626
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- Publication type:
- Article
Xenbase: gene expression and improved integration.
- Published in:
- Nucleic Acids Research, 2010, v. 38, p. D607, doi. 10.1093/nar/gkp953
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- Publication type:
- Article
Xenbase: a Xenopus biology and genomics resource.
- Published in:
- Nucleic Acids Research, 2008, v. 36, p. D761
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- Publication type:
- Article
Projecting 2D gene expression data into 3D and 4D space.
- Published in:
- Developmental Dynamics, 2007, v. 236, n. 4, p. 1036, doi. 10.1002/dvdy.21120
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- Publication type:
- Article
Deepwater broadcast spawning by Montastraea cavernosa, Montastraea franksi, and Diploria strigosa at the Flower Garden Banks, Gulf of Mexico.
- Published in:
- Coral Reefs, 2006, v. 25, n. 1, p. 169, doi. 10.1007/s00338-005-0082-5
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- Publication type:
- Article
Nephrin expression and three-dimensional morphogenesis of the Xenopus pronephric glomus.
- Published in:
- Developmental Dynamics, 2005, v. 233, n. 3, p. 1131
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- Publication type:
- Article
Pronephric regulation of acid–base balance; Coexpression of carbonic anhydrase type 2 and sodium‐bicarbonate cotransporter‐1 in the late distal segment.
- Published in:
- Developmental Dynamics, 2005, v. 233, n. 1, p. 142
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- Publication type:
- Article
A Java tool for dynamic web-based 3D visualization of anatomy and overlapping gene or protein expression patterns.
- Published in:
- Bioinformatics, 2005, v. 21, n. 7, p. 1278, doi. 10.1093/bioinformatics/bti120
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- Publication type:
- Article
A Homeric view of kidney evolution: A reprint of H.W. Smith's classic essay with a new introduction.
- Published in:
- Anatomical Record: Advances in Integrative Anatomy & Evolutionary Biology, 2004, v. 277A, n. 2, p. 344, doi. 10.1002/ar.a.20017
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- Publication type:
- Article
PCP Gene Family in Symbiodinium from Hippopus hippopus: Low Levels of Concerted Evolution, Isoform Diversity, and Spectral Tuning of Chromophores.
- Published in:
- Molecular Biology & Evolution, 2003, v. 20, n. 12, p. 2143, doi. 10.1093/molbev/msg233
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- Publication type:
- Article
Online analysis of development.
- Published in:
- BioEssays, 2001, v. 23, n. 6, p. 549, doi. 10.1002/bies.1075
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- Publication type:
- Article
Directed evolution of the surface chemistry of the reporter enzyme β-glucuronidase.
- Published in:
- Nature Biotechnology, 1999, v. 17, n. 7, p. 696, doi. 10.1038/10910
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- Publication type:
- Article
Wilms' tumor suppressor gene is involved in the development of disparate kidney forms: Evidence from expression in the Xenopus Pronephros.
- Published in:
- Developmental Dynamics, 1996, v. 206, n. 2, p. 131, doi. 10.1002/(SICI)1097-0177(199606)206:2<131::AID-AJA2>3.0.CO;2-J
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- Publication type:
- Article