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The Aeromonas salmonicida plasmidome: a model of modular evolution and genetic diversity.
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- Annals of the New York Academy of Sciences, 2021, v. 1488, p. 16, doi. 10.1111/nyas.14503
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- Article
Distribution of Streptococcus suis, Actinobacillus pleuropneumoniae, and Glaesserella parasuis serotypes isolated from diseased pigs in Quebec between January 2020 and December 2023.
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- Canadian Veterinary Journal / Revue Vétérinaire Canadienne, 2024, v. 65, n. 6, p. 533
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- Article
CAPRIB: a user-friendly tool to study amino acid changes and selection for the exploration of intra-genus evolution.
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- BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-07232-3
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- Article
Resilience of Loin Meat Microbiota and of Resistance Genes to a Chlortetracycline Treatment in Weaned Piglets.
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- Antibiotics (2079-6382), 2024, v. 13, n. 10, p. 997, doi. 10.3390/antibiotics13100997
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- Article
Host Dependent-Transposon for a Plasmid Found in Aeromonas salmonicida subsp. salmonicida That Bears a catB3 Gene for Chloramphenicol Resistance.
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- Antibiotics (2079-6382), 2023, v. 12, n. 2, p. 257, doi. 10.3390/antibiotics12020257
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Studying the Association between Antibiotic Resistance Genes and Insertion Sequences in Metagenomes: Challenges and Pitfalls.
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- Antibiotics (2079-6382), 2023, v. 12, n. 1, p. 175, doi. 10.3390/antibiotics12010175
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- Article
Expansion of the pRAS3 Plasmid Family in Aeromonas salmonicida subsp. salmonicida and Growing Evidence of Interspecies Connections for These Plasmids.
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- Antibiotics (2079-6382), 2022, v. 11, n. 8, p. N.PAG, doi. 10.3390/antibiotics11081047
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Antibiotic Resistance: From Pig to Meat.
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- Antibiotics (2079-6382), 2021, v. 10, n. 10, p. 1209, doi. 10.3390/antibiotics10101209
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Diversity of antibiotic-resistance genes in Canadian isolates of Aeromonas salmonicida subsp. salmonicida: dominance of pSN254b and discovery of pAsa8.
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- Scientific Reports, 2016, p. 35617, doi. 10.1038/srep35617
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- Article
Experimental evolution of Vibrio cholerae identifies hypervesiculation as a way to increase motility in the presence of polymyxin B.
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- Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.932165
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Increasing genomic diversity and evidence of constrained lifestyle evolution due to insertion sequences in Aeromonas salmonicida.
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- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2381-3
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- Article
The oxidative stress response of pathogenic Leptospira is controlled by two peroxide stress regulators which putatively cooperate in controlling virulence.
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- PLoS Pathogens, 2021, v. 17, n. 12, p. 1, doi. 10.1371/journal.ppat.1009087
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- Article
PRESLAUGHTER FEED WITHDRAWAL TIME AND ITS EFFECT ON RABBIT BLOOD MEASURES, GASTROINTESTINAL TRACT PARAMETERS AND LONGISSIMUS LUMBORUM GLYCOLYTIC POTENTIAL.
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- World Rabbit Science, 2023, v. 31, n. 4, p. 237, doi. 10.4995/wrs.2023.19177
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Novel endophytic fungal species Pithoascus kurdistanensis producing morphine compounds.
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- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-71344-z
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- Article
Freedom in bioinformatics.
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- Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00259
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Small molecule inhibitors of fungal Δ(9) fatty acid desaturase as antifungal agents against Candida auris.
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- Frontiers in Cellular & Infection Microbiology, 2024, p. 1, doi. 10.3389/fcimb.2024.1434939
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- Article
Beyond the A‐layer: adsorption of lipopolysaccharides and characterization of bacteriophage‐insensitive mutants of Aeromonas salmonicida subsp. salmonicida.
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- Molecular Microbiology, 2019, v. 112, n. 2, p. 667, doi. 10.1111/mmi.14308
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To Be or Not to Be Mesophilic, That Is the Question for Aeromonas salmonicida.
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- Microorganisms, 2022, v. 10, n. 2, p. N.PAG, doi. 10.3390/microorganisms10020240
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- Article
Systematic Analysis of the Stress-Induced Genomic Instability of Type Three Secretion System in Aeromonas salmonicida subsp. salmonicida.
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- Microorganisms, 2021, v. 9, n. 1, p. 85, doi. 10.3390/microorganisms9010085
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- Article
A Mesophilic Aeromonas salmonicida Strain Isolated from an Unsuspected Host, the Migratory Bird Pied Avocet.
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- Microorganisms, 2019, v. 7, n. 12, p. 592, doi. 10.3390/microorganisms7120592
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Revisiting the taxonomy and evolution of pathogenicity of the genus Leptospira through the prism of genomics.
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- PLoS Neglected Tropical Diseases, 2019, v. 13, n. 5, p. 1, doi. 10.1371/journal.pntd.0007270
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Genome sequencing and functional characterization of a Dictyopanus pusillus fungal enzymatic extract offers a promising alternative for lignocellulose pretreatment of oil palm residues.
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- PLoS ONE, 2020, v. 15, n. 7, p. 1, doi. 10.1371/journal.pone.0227529
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- Article
Isolation of vB_AsaM_LPM4 reveals the dynamics of Prophage 3 in Aeromonas salmonicida subsp. salmonicida.
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- Archives of Virology, 2023, v. 168, n. 2, p. 1, doi. 10.1007/s00705-022-05623-3
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- Article
Characterization of bacteriophage T7-Ah reveals its lytic activity against a subset of both mesophilic and psychrophilic Aeromonas salmonicida strains.
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- Archives of Virology, 2021, v. 166, n. 2, p. 521, doi. 10.1007/s00705-020-04923-w
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A brief history of bioinformatics.
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- Briefings in Bioinformatics, 2019, v. 20, n. 6, p. 1981, doi. 10.1093/bib/bby063
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The Pseudomonas aeruginosa Pan-Genome Provides New Insights on Its Population Structure, Horizontal Gene Transfer, and Pathogenicity.
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- Genome Biology & Evolution, 2019, v. 11, n. 1, p. 109, doi. 10.1093/gbe/evy259
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A Pan-Genomic Approach to Understand the Basis of Host Adaptation in Achromobacter.
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- Genome Biology & Evolution, 2017, v. 9, n. 4, p. 1030, doi. 10.1093/gbe/evx061
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- Article
Plasmid composition in Aeromonas salmonicida subsp. salmonicida 01-B526 unravels unsuspected type three secretion system loss patterns.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3921-1
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- Article
The Mycobacterial Cell Envelope: A Relict From the Past or the Result of Recent Evolution?
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- Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.02341
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Strong Genomic and Phenotypic Heterogeneity in the Aeromonas sobria Species Complex.
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- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.02434
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The Role for the Small Cryptic Plasmids As Moldable Vectors for Genetic Innovation in Aeromonas salmonicida subsp. salmonicida.
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- Frontiers in Genetics, 2017, p. 1, doi. 10.3389/fgene.2017.00211
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- Article
Assessment of Antifungal/Anti-Oomycete Activity of Frass Derived from Black Soldier Fly Larvae to Control Plant Pathogens in Horticulture: Involvement of Bacillus velezensis.
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- Sustainability (2071-1050), 2023, v. 15, n. 14, p. 10957, doi. 10.3390/su151410957
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Specific amino acid changes correlate with pathogenic flavobacteria.
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- Genome, 2024, v. 67, n. 10, p. 368, doi. 10.1139/gen-2024-0018
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- Article
Aeromonas salmonicida isolates from Canada demonstrate wide distribution and clustering among mesophilic strains.
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- Genome, 2023, v. 66, n. 5, p. 108, doi. 10.1139/gen-2022-0086
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Unexpected diversity in the mobilome of a Pseudomonas aeruginosa strain isolated from a dental unit waterline revealed by SMRT Sequencing.
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- Genome, 2018, v. 61, n. 5, p. 359, doi. 10.1139/gen-2017-0239
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RskA Is a Dual Function Activator-Inhibitor That Controls SigK Activity Across Distinct Bacterial Genera.
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- Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.558166
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4-Methylcytosine DNA modification is critical for global epigenetic regulation and virulence in the human pathogen Leptospira interrogans.
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- Nucleic Acids Research, 2020, v. 48, n. 21, p. 12102, doi. 10.1093/nar/gkaa966
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Contribution of farms to the microbiota in the swine value chain.
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- Frontiers in Systems Biology, 2023, v. 3, p. 1, doi. 10.3389/fsysb.2023.1183868
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Genome-wide discovery and characterization of short interspersed nuclear elements (SINEs) in the bovine genome.
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- Journal of Animal Science, 2024, v. 102, p. 445, doi. 10.1093/jas/skae234.504
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Implementing a web‐based introductory bioinformatics course for non‐bioinformaticians that incorporates practical exercises.
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- Biochemistry & Molecular Biology Education, 2018, v. 46, n. 1, p. 31, doi. 10.1002/bmb.21086
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Characterization of LE3 and LE4, the only lytic phages known to infect the spirochete Leptospira.
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- Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-29983-6
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Diversity and Homogeneity among Small Plasmids of Aeromonas salmonicida subsp. salmonicida Linked with Geographical Origin.
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- Frontiers in Microbiology, 2015, v. 6, p. 1, doi. 10.3389/fmicb.2015.01274
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Genomic Characterization of a Tetracycline-Resistant Strain of Brochothrix thermosphacta Highlights Plasmids Partially Shared between Various Strains.
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- Genes, 2023, v. 14, n. 9, p. 1731, doi. 10.3390/genes14091731
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A multi-host approach to identify a transposon mutant of <italic>Pseudomonas aeruginosa</italic> LESB58 lacking full virulence.
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- BMC Research Notes, 2018, v. 11, p. 1, doi. 10.1186/s13104-018-3308-7
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Effect of a probiotic and an antibiotic on the mobilome of the porcine microbiota.
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- Frontiers in Genetics, 2024, p. 1, doi. 10.3389/fgene.2024.1355134
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Pseudomonas aeruginosa isolates defective in function of the LasR quorum sensing regulator are frequent in diverse environmental niches.
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- Environmental Microbiology, 2022, v. 24, n. 3, p. 1062, doi. 10.1111/1462-2920.15745
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Genetic diversity of Leptospira isolates in Lao PDR and genome analysis of an outbreak strain.
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- PLoS Neglected Tropical Diseases, 2021, v. 15, n. 12, p. 1, doi. 10.1371/journal.pntd.0010076
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Amino acid substitutions in specific proteins correlate with farnesol unresponsiveness in Candida albicans.
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- BMC Genomics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12864-023-09174-y
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Chloroplast phylogenomic analysis of chlorophyte green algae identifies a novel lineage sister to the Sphaeropleales (Chlorophyceae).
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- BMC Evolutionary Biology, 2015, v. 15, p. 1, doi. 10.1186/s12862-015-0544-5
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