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CEP3 levels affect starvation-related growth responses of the primary root.
Published in:
Journal of Experimental Botany, 2019, v. 70, n. 18, p. 4763, doi. 10.1093/jxb/erz270
By:
- Delay, Christina;
- Chapman, Kelly;
- Taleski, Michael;
- Wang, Yaowei;
- Tyagi, Sonika;
- Xiong, Yan;
- Imin, Nijat;
- Djordjevic, Michael A
Publication type:
Article
Linc2function: A Comprehensive Pipeline and Webserver for Long Non-Coding RNA (lncRNA) Identification and Functional Predictions Using Deep Learning Approaches.
Published in:
Epigenomes, 2023, v. 7, n. 3, p. 22, doi. 10.3390/epigenomes7030022
By:
- Ramakrishnaiah, Yashpal;
- Morris, Adam P.;
- Dhaliwal, Jasbir;
- Philip, Melcy;
- Kuhlmann, Levin;
- Tyagi, Sonika
Publication type:
Article
Transcriptomic analysis reveals myometrial topologically associated domains linked to the onset of human term labour.
Published in:
Molecular Human Reproduction, 2022, v. 28, n. 3, p. 1, doi. 10.1093/molehr/gaac003
By:
- Tyagi, Sonika;
- Chan, Eng-Cheng;
- Barker, Daniel;
- McElduff, Patrick;
- Taylor, Kelly A;
- Riveros, Carlos;
- Singh, Esha;
- Smith, Roger
Publication type:
Article
Frequent somatic mutations in MAP3K5 and MAP3K9 in metastatic melanoma identified by exome sequencing.
Published in:
Nature Genetics, 2012, v. 44, n. 2, p. 165, doi. 10.1038/ng.1041
By:
- Stark, Mitchell S;
- Woods, Susan L;
- Gartside, Michael G;
- Bonazzi, Vanessa F;
- Dutton-Regester, Ken;
- Aoude, Lauren G;
- Chow, Donald;
- Sereduk, Chris;
- Niemi, Natalie M;
- Tang, Nanyun;
- Ellis, Jonathan J;
- Reid, Jeffrey;
- Zismann, Victoria;
- Tyagi, Sonika;
- Muzny, Donna;
- Newsham, Irene;
- Wu, YuanQing;
- Palmer, Jane M;
- Pollak, Thomas;
- Youngkin, David
Publication type:
Article
Next-generation sequencing: a challenge to meet the increasing demand for training workshops in Australia.
Published in:
Briefings in Bioinformatics, 2013, v. 14, n. 5, p. 563, doi. 10.1093/bib/bbt022
By:
- Watson-Haigh, Nathan S.;
- Shang, Catherine A.;
- Haimel, Matthias;
- Kostadima, Myrto;
- Loos, Remco;
- Deshpande, Nandan;
- Duesing, Konsta;
- Li, Xi;
- McGrath, Annette;
- McWilliam, Sean;
- Michnowicz, Simon;
- Moolhuijzen, Paula;
- Quenette, Steve;
- Revote, Jerico Nico De Leon;
- Tyagi, Sonika;
- Schneider, Maria V.
Publication type:
Article
Characterisation of mouse epididymosomes reveals a complex profile of microRNAs and a potential mechanism for modification of the sperm epigenome.
Published in:
Scientific Reports, 2016, p. 31794, doi. 10.1038/srep31794
By:
- Reilly, Jackson N.;
- McLaughlin, Eileen A.;
- Stanger, Simone J.;
- Anderson, Amanda L.;
- Hutcheon, Kate;
- Church, Kiralee;
- Mihalas, Bettina P.;
- Tyagi, Sonika;
- Holt, Janet E.;
- Eamens, Andrew L.;
- Nixon, Brett
Publication type:
Article
Next Generation Sequencing Analysis Reveals Segmental Patterns of microRNA Expression in Mouse Epididymal Epithelial Cells.
Published in:
PLoS ONE, 2015, v. 10, n. 8, p. 1, doi. 10.1371/journal.pone.0135605
By:
- Nixon, Brett;
- Stanger, Simone J.;
- Mihalas, Bettina P.;
- Reilly, Jackson N.;
- Anderson, Amanda L.;
- Dun, Matthew D.;
- Tyagi, Sonika;
- Holt, Janet E.;
- McLaughlin, Eileen A.
Publication type:
Article
Whole Genome Expression Array Profiling Highlights Differences in Mucosal Defense Genes in Barrett's Esophagus and Esophageal Adenocarcinoma.
Published in:
PLoS ONE, 2011, v. 6, n. 7, p. 1, doi. 10.1371/journal.pone.0022513
By:
- Nancarrow, Derek J.;
- Clouston, Andrew D.;
- Smithers, B. Mark;
- Gotley, David C.;
- Drew, Paul A.;
- Watson, David I.;
- Tyagi, Sonika;
- Hayward, Nicholas K.;
- Whiteman, David C.
Publication type:
Article
Characterization of the Melanoma miRNAome by Deep Sequencing.
Published in:
PLoS ONE, 2010, v. 5, n. 3, p. 1, doi. 10.1371/journal.pone.0009685
By:
- Stark, Mitchell S.;
- Tyagi, Sonika;
- Nancarrow, Derek J.;
- Boyle, Glen M.;
- Cook, Anthony L.;
- Whiteman, David C.;
- Parsons, Peter G.;
- Schmidt, Christopher;
- Sturm, Richard A.;
- Hayward, Nicholas K.
Publication type:
Article
To Act Towards Alarming Situation: A Huge Gap Between Food Supply & Demand.
Published in:
Webology, 2022, v. 19, n. 2, p. 8393
By:
- Tyagi, Sonika;
- Gupta, Yogesh Kumar
Publication type:
Article
The molecular characterisation of mitochondrial DNA deficient oocytes using a pig model.
Published in:
2018
By:
- Tsai, Te-Sha;
- Tyagi, Sonika;
- John, Justin C St.;
- St John, Justin C
Publication type:
journal article
Differential use of multiple replication origins in the ribosomal DNA episome of the protozoan parasite Entamoeba histolytica.
Published in:
Nucleic Acids Research, 2003, v. 31, n. 8, p. 2035, doi. 10.1093/nar/gkg320
By:
- Ghosh, Soma;
- Satish, S.;
- Tyagi, Sonika;
- Bhattacharya, Alok;
- Bhattacharya, Sudha
Publication type:
Article
multi-modal data harmonisation approach for discovery of COVID-19 drug targets.
Published in:
Briefings in Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1093/bib/bbab185
By:
- Chen, Tyrone;
- Philip, Melcy;
- Cao, Kim-Anh Lê;
- Tyagi, Sonika
Publication type:
Article
Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia.
Published in:
Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 384, doi. 10.1093/bib/bbx071
By:
- Schneider, Maria Victoria;
- Griffin, Philippa C;
- Tyagi, Sonika;
- Flannery, Madison;
- Dayalan, Saravanan;
- Gladman, Simon;
- Watson-Haigh, Nathan;
- Bayer, Philipp E;
- Charleston, Michael;
- Cooke, Ira;
- Cook, Rob;
- Edwards, Richard J;
- Edwards, David;
- Gorse, Dominique;
- McConville, Malcolm;
- Powell, David;
- Wilkins, Marc R;
- Lonie, Andrew
Publication type:
Article
Towards an open, collaborative, reusable framework for sharing hands-on bioinformatics training workshops.
Published in:
Briefings in Bioinformatics, 2017, v. 18, n. 2, p. 348, doi. 10.1093/bib/bbw013
By:
- Watson-Haigh, Nathan S.;
- Revote, Jerico;
- Suchecki, Radosław;
- Tyagi, Sonika;
- Corley, Susan M.;
- Shang, Catherine A.;
- McGrath, Annette
Publication type:
Article
Application of Calixarene Ionophores in PVC-Based Ion Selective Electrodes for Heavy Metal Detection.
Published in:
IUP Journal of Chemistry, 2009, v. 2, n. 4, p. 67
By:
- Tyagi, Sonika;
- Agarwal, Himanshu;
- Ikram, Saiqa
Publication type:
Article
A Survey of Current Resources to Study lncRNA-Protein Interactions.
Published in:
Non-Coding RNA, 2021, v. 7, n. 2, p. 1, doi. 10.3390/ncrna7020033
By:
- Philip, Melcy;
- Chen, Tyrone;
- Tyagi, Sonika
Publication type:
Article
Computational prediction of microRNAs in marine bacteria of the genus Thalassospira.
Published in:
PLoS ONE, 2019, v. 14, n. 3, p. 1, doi. 10.1371/journal.pone.0212996
By:
- Dang, Thi Hoang Yen;
- Tyagi, Sonika;
- D’Cunha, Glenn;
- Bhave, Mrinal;
- Crawford, Russell;
- Ivanova, Elena P.
Publication type:
Article
Biosynthetic constraints on amino acid synthesis at the base of the food chain may determine their use in higher-order consumer genomes.
Published in:
PLoS Genetics, 2023, v. 18, n. 2, p. 1, doi. 10.1371/journal.pgen.1010635
By:
- Gómez Ortega, Javier;
- Raubenheimer, David;
- Tyagi, Sonika;
- Mirth, Christen K.;
- Piper, Matthew D. W.
Publication type:
Article

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