Works by Tsumura, Yoshihiko

Results: 134

Molecular Evolution of Nuclear Genes in Cupressacea, a Group of Conifer Trees.

Published in:

Molecular Biology & Evolution, 2002, v. 19, n. 5, p. 736, doi. 10.1093/oxfordjournals.molbev.a004132

By:

Kusumi, Junko;
Tsumura, Yoshihiko;
Yoshimaru, Hiroshi;
Tachida, Hidenori

Publication type:

Article

Chloroplast DNA Inversion Polymorphism in Populations of Abies and Tsuga.

Published in:

Molecular Biology & Evolution, 2000, v. 17, n. 9, p. 1302, doi. 10.1093/oxfordjournals.molbev.a026414

By:

Tsumura, Yoshihiko;
Suyama, Yoshihisa;
Yoshimura, Kensuke

Publication type:

Article

ISOLATION AND CHARACTERIZATION OF 52 POLYMORPHIC EST-SSR MARKERS FOR CALLITRIS COLUMELLARIS (CUPRESSACEAE).

Published in:

American Journal of Botany, 2011, v. 98, n. 12, p. e363, doi. 10.3732/ajb.1100276

By:

Sakaguchi, Shota;
Uchiyama, Kentaro;
Ueno, Saneyoshi;
Ujino-Ihara, Tokuko;
Tsumura, Yoshihiko;
Prior, Lynda D.;
Bowman, David M. J. S.;
Crisp, Michael D.;
Isagi, Yuji

Publication type:

Article

MULTILOCUS PATTERNS OF NUCLEOTIDE POLYMORPHISM AND DEMOGRAPHIC CHANGE IN TAXODIUM DISTICHUM (CUPRESSACEAE) IN THE LOWER MISSISSIPPI RIVER ALLUVIAL VALLEY.

Published in:

American Journal of Botany, 2010, v. 97, n. 11, p. 1848, doi. 10.3732/ajb.1000082

By:

KUSUMI, JUNKO;
ZIDONG, LI;
KADO, TOMOYUKI;
TSUMURA, YOSHIHIKO;
MIDDLETON, BETH A.;
TACHIDA, HIDENORI

Publication type:

Article

POPULATION DIFFERENTIATION AND GENE FLOW WITHIN A METAPOPULATION OF A THREATENED TREE, MAGNOLIA STELLATA (MAGNOLIACEAE).

Published in:

American Journal of Botany, 2007, v. 94, n. 1, p. 128, doi. 10.3732/ajb.94.1.128

By:

Setsuko, Suzuki;
Ishida, Kiyoshi;
Ueno, Saneyoshi;
Tsumura, Yoshihiko;
Tomaru, Nobuhiro

Publication type:

Article

EFFECT OF FLOWERING PHENOLOGY ON POLLEN FLOW DISTANCE AND THE CONSEQUENCES FOR SPATIAL GENETIC STRUCTURE WITHIN A POPULATION OF PRIMULA SIEBOLDH (PRIMULACEAE).

Published in:

American Journal of Botany, 2006, v. 93, n. 2, p. 226, doi. 10.3732/ajb.93.2.226

By:

Kitamoto, Naoko;
Ueno, Saneyoshi;
Takenaka, Akio;
Tsumura, Yoshihiko;
Washitani, Izumi;
Ohsawa, Ryo

Publication type:

Article

PHYLOGENETIC RELATIONSHIPS IN TAXODIACEAE AND CUPRESSACEAE SENSU STRICTO BASED ON MATK GENE, CHLL GENE, TRNL-TRNF IGS REGION, AND TRNL INTRON SEQUENCES.

Published in:

American Journal of Botany, 2000, v. 87, n. 10, p. 1480, doi. 10.2307/2656874

By:

Kusumi, Junko;
Tsumura, Yoshihiko

Publication type:

Article

Phylogenetic Relationships of Eurasian Pines (Pinus, Pinaceae) Based on Chloroplast RBCL, MatK...

Published in:

American Journal of Botany, 1999, v. 86, n. 12, p. 1742, doi. 10.2307/2656672

By:

Wang, Xiao-Ru;
Tsumura, Yoshihiko

Publication type:

Article

Intraspecific variation and phylogeographic patterns of Fagus crenata (Fagaceae) mitochondrial DNA.

Published in:

American Journal of Botany, 1998, v. 85, n. 5, p. 629, doi. 10.2307/2446531

By:

Tomaru, Nobuhiro;
Takahashi, Mizuki;
Tsumura, Yoshihiko;
Takahashi, Makoto;
Ohba, Kihachiro

Publication type:

Article

Genotype-by-environment interaction and genetic dissection of heartwood color in Cryptomeria japonica based on multiple common gardens and quantitative trait loci mapping.

Published in:

PLoS ONE, 2022, v. 17, n. 7, p. 1, doi. 10.1371/journal.pone.0270522

By:

Mori, Hideki;
Ueno, Saneyoshi;
Ujino-Ihara, Tokuko;
Fujiwara, Takeshi;
Yamashita, Kana;
Kanetani, Seiichi;
Endo, Ryota;
Matsumoto, Asako;
Uchiyama, Kentaro;
Yoshida, Takahiro;
Sakai, Yoshimi;
Moriguchi, Yoshinari;
Kusano, Ryouichi;
Tsumura, Yoshihiko

Publication type:

Article

Generation of expressed sequence tags, development of microsatellite and single nucleotide polymorphism markers in Primula sieboldii E. Morren (Primulaceae) for analysis of genetic diversity in natural and horticultural populations.

Published in:

Breeding Science, 2011, v. 61, n. 3, p. 234, doi. 10.1270/jsbbs.61.234

By:

Ueno, Saneyoshi;
Yoshida, Yasuko;
Taguchi, Yuriko;
Ujino-Ihara, Tokuko;
Kitamoto, Naoko;
Honjo, Masanori;
Ohsawa, Ryo;
Washitani, Izumi;
Tsumura, Yoshihiko

Publication type:

Article

Adaptive and Slightly Deleterious Evolution in a Conifer, Cryptomeria japonica.

Published in:

Journal of Molecular Evolution, 2008, v. 67, n. 2, p. 201, doi. 10.1007/s00239-008-9140-2

By:

Fujimoto, Akihiro;
Kado, Tomoyuki;
Yoshimaru, Hiroshi;
Tsumura, Yoshihiko;
Tachida, Hidenori

Publication type:

Article

Screening for genes specific to coniferous species.

Published in:

Tree Physiology, 2008, v. 28, n. 9, p. 1325, doi. 10.1093/treephys/28.9.1325

By:

Tokuko Ujino-Ihara;
Yoshihiko Tsumura

Publication type:

Article

Characterization of genes for novel thaumatin-like proteins in Cryptomeria japonica.

Published in:

Tree Physiology, 2006, v. 26, n. 1, p. 51, doi. 10.1093/treephys/26.1.51

By:

FUTAMURA, NORIHIRO;
TANI, NAOKI;
TSUMURA, YOSHIHIKO;
NAKAJIMA, NOBUYOSHI;
SAKAGUCHI, MASAHIKO;
SHINOHARA, KENJI

Publication type:

Article

Negative frequency-dependent selection through variations in seedling fitness due to genetic differentiation of parents' pair in a tropical rainforest tree, Rubroshorea curtisii (Dipterocarpaceae).

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1552024

By:

Tani, Naoki;
Ng, Chin Hong;
Lee, Soon Leong;
Lee, Chai Ting;
Muhammad, Norwati;
Kondo, Toshiaki;
Tsumura, Yoshihiko;
Sugiyama, Saori;
Niiyama, Kaoru;
Ripin, Azizi;
Kassim, Abdul Rahman;
Musa, Samsudin

Publication type:

Article

An efficient method for developing SNP markersbased on EST data combined with highresolution melting (HRM) analysis.

Published in:

BMC Research Notes, 2010, v. 3, p. 51, doi. 10.1186/1756-0500-3-51

By:

Ujino-Ihara, Tokuko;
Taguchi, Yuriko;
Moriguchi, Yoshinari;
Tsumura, Yoshihiko

Publication type:

Article

Assessment of the genetic diversity and population structure of Maire yew ( Taxus chinensis var. mairei) for conservation purposes.

Published in:

Canadian Journal of Forest Research, 2018, v. 48, n. 5, p. 589, doi. 10.1139/cjfr-2017-0429

By:

Wen, Yafeng;
Uchiyama, Kentaro;
Ueno, Saneyoshi;
Han, Wenjun;
Xie, Weidong;
Tsumura, Yoshihiko

Publication type:

Article

Variation of paternal contribution in a seed orchard of Cryptomeria japonica determined using microsatellite markers.

Published in:

Canadian Journal of Forest Research, 2004, v. 34, n. 8, p. 1683, doi. 10.1139/X04-029

By:

Moriguchi, Yoshinari;
Taira, Hideaki;
Tani, Naoki;
Tsumura, Yoshihiko

Publication type:

Article

DNA analysis of clonal structure of an old growth, isolated forest of Cryptomeria japonica in a snowy region.

Published in:

Canadian Journal of Forest Research, 2001, v. 31, n. 3, p. 377, doi. 10.1139/x00-177

By:

Moriguchi, Yoshinari;
Matsumoto, Asako;
Saito, Maki;
Tsumura, Yoshihiko;
Taira, Hideaki

Publication type:

Article

Scanning RNA-Seq and RAD-Seq approach to develop SNP markers closely linked to MALE STERILITY 1 (MSI) in Cryptomeria japonica D. Don.

Published in:

Breeding Science, 2019, v. 69, n. 1, p. 19, doi. 10.1270/jsbbs.17149

By:

Saneyoshi Ueno;
Kentaro Uehiyama;
Yoshinari Moriguchi;
Tokuko Ujino-Ihara;
Asako Matsumoto;
Fu-Jin Wei;
Maki Saito;
Yumi Higuehi;
Norihiro Futamura;
Hiroyuki Kananiori;
Yuichi Katayose;
Yoshihiko Tsumura

Publication type:

Article

Molecular database for classifying Shorea species (Dipterocarpaceae) and techniques for checking the legitimacy of timber and wood products.

Published in:

Journal of Plant Research, 2011, v. 124, n. 1, p. 35, doi. 10.1007/s10265-010-0348-z

By:

Tsumura, Yoshihiko;
Kado, Tomoyuki;
Yoshida, Kazumasa;
Abe, Hisashi;
Ohtani, Masato;
Taguchi, Yuriko;
Fukue, Yoko;
Tani, Naoki;
Ueno, Saneyoshi;
Yoshimura, Kensuke;
Kamiya, Koichi;
Harada, Ko;
Takeuchi, Yayoi;
Diway, Bibian;
Finkeldey, Reiner;
Na'iem, Mohamad;
Indrioko, Sapto;
Ng, Kevin;
Muhammad, Norwati;
Lee, Soon

Publication type:

Article

Genetic structure of island populations of Prunus lannesiana var. speciosa revealed by chloroplast DNA, AFLP and nuclear SSR loci analyses.

Published in:

Journal of Plant Research, 2011, v. 124, n. 1, p. 11, doi. 10.1007/s10265-010-0352-3

By:

Kato, Shuri;
Iwata, Hiroyoshi;
Tsumura, Yoshihiko;
Mukai, Yuzuru

Publication type:

Article

Genetic diversity and structure of natural fragmented Chamaecyparis obtusa populations as revealed by microsatellite markers.

Published in:

Journal of Plant Research, 2010, v. 123, n. 5, p. 689, doi. 10.1007/s10265-009-0299-4

By:

Matsumoto, Asako;
Uchida, Kohji;
Taguchi, Yuriko;
Tani, Naoki;
Tsumura, Yoshihiko

Publication type:

Article

Genetic structure of Cerasus jamasakura, a Japanese flowering cherry, revealed by nuclear SSRs: implications for conservation.

Published in:

Journal of Plant Research, 2009, v. 122, n. 4, p. 367, doi. 10.1007/s10265-009-0224-x

By:

Tsuda, Yoshiaki;
Kimura, Madoka;
Kato, Shuri;
Katsuki, Toshio;
Mukai, Yuzuru;
Tsumura, Yoshihiko

Publication type:

Article

Size-related flowering and fecundity in the tropical canopy tree species, Shorea acuminata (Dipterocarpaceae) during two consecutive general flowerings.

Published in:

Journal of Plant Research, 2008, v. 121, n. 1, p. 33, doi. 10.1007/s10265-007-0116-x

By:

Naito, Yoko;
Kanzaki, Mamoru;
Numata, Shinya;
Obayashi, Kyoko;
Konuma, Akihiro;
Nishimura, Sen;
Ohta, Seiichi;
Tsumura, Yoshihiko;
Okuda, Toshinori;
Lee, Soon;
Muhammad, Norwati

Publication type:

Article

Effects of flowering tree density on the mating system and gene flow in Shorea leprosula (Dipterocarpaceae) in Peninsular Malaysia.

Published in:

Journal of Plant Research, 2007, v. 120, n. 3, p. 413, doi. 10.1007/s10265-007-0078-z

By:

Fukue, Yoko;
Kado, Tomoyuki;
Soon Leong Lee;
Kit Siong Ng, Kevin;
Muhammad, Norwati;
Tsumura, Yoshihiko

Publication type:

Article

Selfing and inbreeding depression in seeds and seedlings of Neobalanocarpus heimii (Dipterocarpaceae).

Published in:

Journal of Plant Research, 2005, v. 118, n. 6, p. 423, doi. 10.1007/s10265-005-0245-z

By:

Naito, Yoko;
Konuma, Akihiro;
Iwata, Hiroyoshi;
Suyama, Yoshihisa;
Seiwa, Kenji;
Okuda, Toshinori;
Soon Leong Lee;
Muhammad, Norwati;
Tsumura, Yoshihiko

Publication type:

Article

Microsatellite markers reveal high allelic variation in natural populations of Cryptomeria japonica near refugial areas of the last glacial period.

Published in:

Journal of Plant Research, 2005, v. 118, n. 2, p. 83, doi. 10.1007/s10265-005-0198-2

By:

Takahashi, Tomokazu;
Tani, Naoki;
Taira, Hideaki;
Tsumura, Yoshihiko

Publication type:

Article

Detecting east-west genetic differentiation in Castanopsis (Fagaceae) on the main islands of Japan and north-south on the Ryukyu Islands, based on chloroplast haplotypes.

Published in:

Plant Systematics & Evolution, 2016, v. 302, n. 8, p. 1093, doi. 10.1007/s00606-016-1319-1

By:

Aoki, Kyoko;
Ueno, Saneyoshi;
Kamijo, Takashi;
Setoguchi, Hiroaki;
Murakami, Noriaki;
Kato, Makoto;
Tsumura, Yoshihiko

Publication type:

Article

TodoFirGene: Developing Transcriptome Resources for Genetic Analysis of Abies sachalinensis.

Published in:

Plant & Cell Physiology, 2018, v. 59, n. 6, p. 1276, doi. 10.1093/pcp/pcy058

By:

Ueno, Saneyoshi;
Nakamura, Yukino;
Kobayashi, Masaaki;
Terashima, Shin;
Ishizuka, Wataru;
Uchiyama, Kentaro;
Tsumura, Yoshihiko;
Yano, Kentaro;
Goto, Susumu

Publication type:

Article

Fine-scale spatial structure of genets and sexes in the dioecious plant Dioscorea japonica, which disperses by both bulbils and seeds.

Published in:

Evolutionary Ecology, 2010, v. 24, n. 6, p. 1399, doi. 10.1007/s10682-010-9396-z

By:

Mizuki, Inoue;
Ishida, Kiyoshi;
Tani, Naoki;
Tsumura, Yoshihiko

Publication type:

Article

Evaluation of the conservation value and conservation difficulty of local populations of the rare plant Viola raddeana based on genetic diversity and gene expression information using next‐generation sequencers.

Published in:

Plant Species Biology, 2025, v. 40, n. 3, p. 195, doi. 10.1111/1442-1984.12507

By:

Shiraishi, Hiroaki;
Suyama, Yoshihisa;
Makino, Takashi;
Hirota, Shun K.;
Obata, Kazuo;
Lee, Jung‐Hyun;
Choi, Hyeok Jae;
Tsumura, Yoshihiko

Publication type:

Article

Intraspecific genetic divergence of the subalpine shrubby variety Quercus crispula var. horikawae from the mountain tree variety Q. crispula var. crispula in Japan.

Published in:

Plant Species Biology, 2024, v. 39, n. 3, p. 113, doi. 10.1111/1442-1984.12447

By:

San Jose‐Maldia, Lerma;
Matsumoto, Asako;
Nagamitsu, Teruyoshi;
Ueno, Saneyoshi;
Tsumura, Yoshihiko

Publication type:

Article

Interspecific variation in clonality in temperate lianas revealed by genetic analysis: Do clonal proliferation processes differ among lianas?

Published in:

Plant Species Biology, 2021, v. 36, n. 4, p. 578, doi. 10.1111/1442-1984.12348

By:

Mori, Hideki;
Ueno, Saneyoshi;
Kamijo, Takashi;
Tsumura, Yoshihiko;
Masaki, Takashi

Publication type:

Article

Contact zone of two different chloroplast lineages and genetic guidelines for seed transfer in Quercus serrata and Quercus crispula.

Published in:

Plant Species Biology, 2021, v. 36, n. 1, p. 72, doi. 10.1111/1442-1984.12296

By:

Onosato, Kataru;
Shitara, Takuto;
Matsumoto, Asako;
Matsuo, Ayumi;
Suyama, Yoshihisa;
Tsumura, Yoshihiko

Publication type:

Article

Development of chloroplast markers for Japanese and snow camellias.

Published in:

Plant Species Biology, 2016, v. 31, n. 1, p. 80, doi. 10.1111/1442-1984.12083

By:

Ueno, Saneyoshi;
Taguchi, Yuriko;
Tsumura, Yoshihiko

Publication type:

Article

Population and genetic status of Primula kisoana var. kisoana, a local endemic of the northern Kanto region, Japan.

Published in:

Plant Species Biology, 2005, v. 20, n. 3, p. 209, doi. 10.1111/j.1442-1984.2005.00140.x

By:

OHTANI, MASATO;
TERAUCHI, HIROSHI;
NISHIHIRO, JUN;
UENO, SANEYOSHI;
TSUMURA, YOSHIHIKO;
WASHITANI, IZUMI

Publication type:

Article

Genetic Variation and Population Differentiation in Natural Populations of <em>Cryptomeria japonica</em>.

Published in:

Plant Species Biology, 1994, v. 9, n. 3, p. 191, doi. 10.1111/j.1442-1984.1994.tb00101.x

By:

Tomaru, Nobuhiro;
Tsumura, Yoshihiko;
Ohba, Kihachiro

Publication type:

Article

Evidence of intense chromosomal shuffling during conifer evolution.

Published in:

Genome Biology & Evolution, 2015, v. 7, n. 10, p. 2799, doi. 10.1093/gbe/evv185

By:

de Miguel, Marina;
Bartholomé, Jérôme;
Ehrenmann, François;
Florent Murat;
Yoshinari Moriguchi;
Kentaro Uchiyama;
Saneyoshi Ueno;
Yoshihiko Tsumura;
Lagraulet, Hélène;
de Maria, Nuria;
Cabezas, José-Antonio;
Cervera, Maria-Teresa;
Gion, Jean Marc;
Jérôme Salse;
Plomion, Christophe

Publication type:

Article

Site characteristics of Betula ermanii range-wide provenance trials [revised version].

Published in:

Miscellaneous Information of The University of Tokyo Forests, 2024, v. 69, n. 1, p. 11, doi. 10.15083/0002008357

By:

AYE MYAT MYAT PAING;
Shufen Chen;
Kyoko Araki;
Takaki Aihara;
Ragini Sarmah;
Mitsuru Hirota;
Yoshihiko Tsumura;
Nobuhiro Tomaru;
Kousuke Homma;
Masahiko Kadomatsu;
Toshiya Yoshida;
Hajime Kobayashi;
Atsuhiro Iio;
Katsuhiro Osumi;
Dai Nagamatsu;
Masahiro Takagi;
Haruhiko Taneda;
Noriyuki Kimura;
Satoshi Fukuoka;
Yoko Hisamoto

Publication type:

Article

Mating patterns in an indoor miniature Cryptomeria japonica seed orchard as revealed by microsatellite markers.

Published in:

New Forests, 2010, v. 39, n. 3, p. 261, doi. 10.1007/s11056-009-9169-0

By:

Moriguchi, Yoshinari;
Yamazaki, Yoko;
Taira, Hideaki;
Tsumura, Yoshihiko

Publication type:

Article

Conflict in outcomes for conservation based on population genetic diversity and genetic divergence approaches: a case study in the Japanese relictual conifer Sciadopitys verticillata (Sciadopityaceae).

Published in:

Conservation Genetics, 2014, v. 15, n. 5, p. 1243, doi. 10.1007/s10592-014-0615-y

By:

Worth, James;
Yokogawa, Masashi;
Pérez-Figueroa, Andrés;
Tsumura, Yoshihiko;
Tomaru, Nobuhiro;
Janes, Jasmine;
Isagi, Yuji

Publication type:

Article

Development and characterization of EST-SSR markers for Sciadopitys verticillata (Sciadopityaceae).

Published in:

Conservation Genetics, 2009, v. 10, n. 6, p. 1997, doi. 10.1007/s10592-009-9877-1

By:

Kawase, Daij;
Ueno, Saneyoshi;
Tsumura, Yoshihiko;
Tomaru, Nobuhiro;
Seo, Akihiro;
Yumoto, Takakazu

Publication type:

Article

Development of 120 microsatellite markers for Primula sieboldii E. Morren for linkage mapping.

Published in:

Conservation Genetics, 2009, v. 10, n. 6, p. 1945, doi. 10.1007/s10592-009-9861-9

By:

Ueno, Saneyoshi;
Yoshida, Yasuko;
Taguchi, Yuriko;
Honjo, Masanori;
Kitamoto, Naoko;
Washitani, Izumi;
Ohsawa, Ryo;
Tsumura, Yoshihiko

Publication type:

Article

Development of EST-SSR markers from an inner bark cDNA ibrary of Fagus crenata (Fagaceae).

Published in:

Conservation Genetics, 2009, v. 10, n. 5, p. 1477, doi. 10.1007/s10592-008-9764-1

By:

Saneyoshi Ueno;
Taguchi, Yuriko;
Tomaru, Nobuhiro;
Tsumura, Yoshihiko

Publication type:

Article

Development of 11 EST-SSRs for Japanese white birch, Betula platyphylla var. japonica and their transferability to related species.

Published in:

Conservation Genetics, 2009, v. 10, n. 5, p. 1385, doi. 10.1007/s10592-008-9701-3

By:

Tsuda, Yoshiaki;
Ueno, Saneyoshi;
Ranta, Janita;
Salminen, Katja;
Ide, Yuji;
Shinohara, Kenji;
Tsumura, Yoshihiko

Publication type:

Article

Development of 13 EST-SSRs for Cerasus jamasakura and their transferability for Japanese flowering cherries.

Published in:

Conservation Genetics, 2009, v. 10, n. 3, p. 685, doi. 10.1007/s10592-008-9615-0

By:

Tsuda, Yoshiaki;
Ueno, Saneyoshi;
Kato, Shuri;
Katsuki, Toshio;
Mukai, Yuzuru;
Tsumura, Yoshihiko

Publication type:

Article

Development of 14 EST-SSRs for Betula maximowicziana and their applicability to related species.

Published in:

Conservation Genetics, 2009, v. 10, n. 3, p. 661, doi. 10.1007/s10592-008-9608-z

By:

Tsuda, Yoshiaki;
Ueno, Saneyoshi;
Ide, Yuji;
Tsumura, Yoshihiko

Publication type:

Article

Management units of the endangered herb Primula sieboldii based on microsatellite variation among and within populations throughout Japan.

Published in:

Conservation Genetics, 2009, v. 10, n. 2, p. 257, doi. 10.1007/s10592-007-9292-4

By:

Honjo, Masanori;
Kitamoto, Naoko;
Ueno, Saneyoshi;
Tsumura, Yoshihiko;
Washitani, Izumi;
Ohsawa, Ryo

Publication type:

Article

Towards a legal framework for systematic conservation: identification and development of allele-specific PCR markers for conspecific varieties of an endangered perennial herb Primula kisoana Miquel based on sequence variation of chloroplast DNA.

Published in:

Conservation Genetics, 2008, v. 9, n. 5, p. 1173, doi. 10.1007/s10592-007-9433-9

By:

Ohtani, Masato;
Terauchi, Hiroshi;
Nishihiro, Jun;
Ueno, Saneyoshi;
Tsumura, Yoshihiko;
Washitani, Izumi

Publication type:

Article