Works by Tsavachidis, Spiridon

Results: 20

Human genes differ by their UV sensitivity estimated through analysis of UV‐induced silent mutations in melanoma.

Published in:

Human Mutation, 2020, v. 41, n. 10, p. 1751, doi. 10.1002/humu.24078

By:

Gorlov, Ivan P.;
Amos, Christopher I.;
Tsavachidis, Spiridon;
Begg, Colin;
Hernando, Eva;
Cheng, Chao;
Shen, Ronglai;
Orlow, Irene;
Luo, Li;
Ernstoff, Marc S.;
Parker, Joel;
Thomas, Nancy E.;
Gorlova, Olga Y.;
Berwick, Marianne

Publication type:

Article

Maternal folate genes and aberrant DNA hypermethylation in pediatric acute lymphoblastic leukemia.

Published in:

PLoS ONE, 2018, v. 13, n. 5, p. 1, doi. 10.1371/journal.pone.0197408

By:

Schraw, Jeremy M.;
Yiu, Teresa T.;
Lupo, Philip J.;
Tsavachidis, Spiridon;
Rau, Rachel;
Bondy, Melissa L.;
Rabin, Karen R.;
Shen, Lanlan;
Scheurer, Michael E.

Publication type:

Article

Global analysis of aberrant pre-mRNA splicing in glioblastoma using exon expression arrays.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-216

By:

Cheung, Hannah C.;
Baggerly, Keith A.;
Tsavachidis, Spiridon;
Bachinski, Linda L.;
Neubauer, Valerie L.;
Nixon, Tamara J.;
Aldape, Kenneth D.;
Cote, Gilbert J.;
Krahe, Ralf

Publication type:

Article

Combined laser capture microdissection and serial analysis of gene expression from human tissue samples.

Published in:

2005

By:

Cho-Vega, Jeong Hee;
Troncoso, Patricia;
Do, Kim-Anh;
Rago, Carlo;
Wang, Xuemei;
Tsavachidis, Spiridon;
Jeffrey Medeiros, L.;
Spurgers, Kevin;
Logothetis, Christopher;
McDonnell, Timothy J.;
Medeiros, L Jeffrey

Publication type:

journal article

Tumor somatic mutations also existing as germline polymorphisms may help to identify functional SNPs from genome-wide association studies.

Published in:

Carcinogenesis, 2020, v. 41, n. 10, p. 1353, doi. 10.1093/carcin/bgaa077

By:

Gorlov, Ivan P;
Xia, Xiangjun;
Tsavachidis, Spiridon;
Gorlova, Olga Y;
Amos, Christopher I

Publication type:

Article

WNT Signaling Pathway Gene Polymorphisms and Risk of Hepatic Fibrosis and Inflammation in HCV-Infected Patients.

Published in:

PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0084407

By:

Liu, Yanhong;
El-Serag, Hashem B.;
Jiao, Li;
Lee, JuSeog;
Moore, David;
Franco, Luis M.;
Tavakoli-Tabasi, Shahriar;
Tsavachidis, Spiridon;
Kuzniarek, Jill;
Ramsey, David J.;
White, Donna L.

Publication type:

Article

Splicing factors PTBP1 and PTBP2 promote proliferation and migration of glioma cell lines.

Published in:

Brain: A Journal of Neurology, 2009, v. 132, n. 8, p. 2277, doi. 10.1093/brain/awp153

By:

Cheung, Hannah C.;
Hai, Tao;
Zhu, Wen;
Baggerly, Keith A.;
Tsavachidis, Spiridon;
Krahe, Ralf;
Cote, Gilbert J.

Publication type:

Article

Improved peak detection and quantification of mass spectrometry data acquired from surface-enhanced laser desorption and ionization by denoising spectra with the undecimated discrete wavelet transform.

Published in:

Proteomics, 2005, v. 5, n. 16, p. 4107, doi. 10.1002/pmic.200401261

By:

Kevin R. Coombes;
Spiridon Tsavachidis;
Jeffrey 4;S. Morris;
Keith 4;A. Baggerly;
Mien-Chie Hung;
Henry 4;M. Kuerer

Publication type:

Article

Genetic modulation of longitudinal change in neurocognitive function among adult glioma patients.

Published in:

Journal of Neuro-Oncology, 2022, v. 156, n. 1, p. 185, doi. 10.1007/s11060-021-03905-5

By:

Wefel, Jeffrey S.;
Zhou, Renke;
Sulman, Erik P.;
Boehling, Nicholas S.;
Armstrong, Georgina N.;
Tsavachidis, Spiridon;
Liang, Fu-Wen;
Etzel, Carol J.;
Kahalley, Lisa S.;
Small, Brent J.;
Scheurer, Michael E.;
Bondy, Melissa L.;
Liu, Yanhong

Publication type:

Article

Role of monoamine-oxidase-A-gene variation in the development of glioblastoma in males: a case control study.

Published in:

Journal of Neuro-Oncology, 2019, v. 145, n. 2, p. 287, doi. 10.1007/s11060-019-03294-w

By:

Sjöberg, Rickard L.;
Wu, Wendy Yi-Ying;
Dahlin, Anna M.;
Tsavachidis, Spiridon;
The Gliogene Group;
Wrensch, Margaret R.;
Olson, Sara H.;
Scheurer, Michael E.;
Il'yasova, Dora;
Lachance, Daniel;
Armstrong, Georgina N.;
McCoy, Lucie S.;
Lau, Ching C.;
Claus, Elizabeth B.;
Barnholtz-Sloan, Jill S.;
Schildkraut, Joellen;
Ali-Osman, Francis;
Sadetzki, Siegal;
Johansen, Christoffer;
Houlston, Richard S.

Publication type:

Article

Germline polymorphisms in myeloid-associated genes are not associated with survival in glioma patients.

Published in:

Journal of Neuro-Oncology, 2018, v. 136, n. 1, p. 33, doi. 10.1007/s11060-017-2622-6

By:

Jacobs, Daniel I.;
Liu, Yanhong;
Gabrusiewicz, Konrad;
Tsavachidis, Spiridon;
Armstrong, Georgina N.;
Zhou, Renke;
Wei, Jun;
Ivan, Cristina;
Calin, George;
Molinaro, Annette M.;
Rice, Terri;
Bracci, Paige M.;
Hansen, Helen M.;
Wiencke, John K.;
Wrensch, Margaret R.;
Heimberger, Amy B.;
Bondy, Melissa L.

Publication type:

Article

Transcriptome-wide Mendelian randomization study prioritising novel tissue-dependent genes for glioma susceptibility.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-82169-5

By:

Robinson, Jamie W.;
Martin, Richard M.;
Tsavachidis, Spiridon;
Howell, Amy E.;
Relton, Caroline L.;
Armstrong, Georgina N.;
Bondy, Melissa;
Zheng, Jie;
Kurian, Kathreena M.

Publication type:

Article

Breast Cancer Treatment Delay in SafetyNet Health Systems, Houston Versus Southeast Brazil.

Published in:

Oncologist, 2022, v. 27, n. 5, p. 344, doi. 10.1093/oncolo/oyac050

By:

Shafaee, Maryam Nemati;
Silva, Leonardo Roberto;
Ramalho, Susana;
Doria, Maira Teixeira;
Natal, Rodrigo De Andrade;
Cabello, Victor;
Cons, Livia;
Pavanello, Marina;
Zeferino, Luiz Carlos;
Mano, Max S;
Linck, Rudinei Diogo Marques;
Batista, Leticia Souza;
Pedro, Estela Pantarotto;
Paula, Bruno Henrique De;
Zuca-Matthes, Gustavo;
Podany, Emily;
Makawita, Shalini;
Stewart, Kelsey Ann;
Tsavachidis, Spiridon;
Tamimi, Rull

Publication type:

Article

Somatic mutations of esophageal adenocarcinoma: a comparison between Black and White patients.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-59257-3

By:

Lim, Hyeyeun;
Gingras, Marie-Claude;
Zhao, Jing;
Byun, Jinyoung;
Castro, Patricia D.;
Tsavachidis, Spiridon;
Hu, Jianhong;
Doddapaneni, Harshavardhan;
Han, Yi;
Muzny, Donna M.;
Gibbs, Richard A.;
Amos, Christopher I.;
Thrift, Aaron P.

Publication type:

Article

Risk stratification for hepatocellular cancer among patients with cirrhosis using a hepatic fat polygenic risk score.

Published in:

PLoS ONE, 2023, v. 18, n. 2, p. 1, doi. 10.1371/journal.pone.0282309

By:

Thrift, Aaron P.;
Kanwal, Fasiha;
Liu, Yanhong;
Khaderi, Saira;
Singal, Amit G.;
Marrero, Jorge A.;
Loo, Nicole;
Asrani, Sumeet K.;
Luster, Michelle;
Al-Sarraj, Abeer;
Ning, Jing;
Tsavachidis, Spiridon;
Gu, Xiangjun;
Amos, Christopher I.;
El-Serag, Hashem B.

Publication type:

Article

Rare deleterious germline variants and risk of lung cancer.

Published in:

NPJ Precision Oncology, 2021, v. 5, n. 1, p. 1, doi. 10.1038/s41698-021-00146-7

By:

Liu, Yanhong;
Xia, Jun;
McKay, James;
Tsavachidis, Spiridon;
Xiao, Xiangjun;
Spitz, Margaret R.;
Cheng, Chao;
Byun, Jinyoung;
Hong, Wei;
Li, Yafang;
Zhu, Dakai;
Song, Zhuoyi;
Rosenberg, Susan M.;
Scheurer, Michael E.;
Kheradmand, Farrah;
Pikielny, Claudio W.;
Lusk, Christine M.;
Schwartz, Ann G.;
Wistuba, Ignacio I.;
Cho, Michael H.

Publication type:

Article

Molecular signatures of metastasis in head and neck cancer.

Published in:

Head & Neck, 2008, v. 30, n. 10, p. 1273, doi. 10.1002/hed.20871

By:

Colella, Stefano;
Richards, Kristy L.;
Bachinski, Linda L.;
Baggerly, Keith A.;
Tsavachidis, Spiridon;
Lang, James C.;
Schuller, David E.;
Krahe, Ralf

Publication type:

Article

SNP characteristics and validation success in genome wide association studies.

Published in:

Human Genetics, 2022, v. 141, n. 2, p. 229, doi. 10.1007/s00439-021-02407-8

By:

Gorlova, Olga Y.;
Xiao, Xiangjun;
Tsavachidis, Spiridon;
Amos, Christopher I.;
Gorlov, Ivan P.

Publication type:

Article

Insight in glioma susceptibility through an analysis of 6p22.3, 12p13.33-12.1, 17q22-23.2 and 18q23 SNP genotypes in familial and non-familial glioma.

Published in:

Human Genetics, 2012, v. 131, n. 9, p. 1507, doi. 10.1007/s00439-012-1187-x

By:

Liu, Yanhong;
Melin, Beatrice;
Rajaraman, Preetha;
Wang, Zhaoming;
Linet, Martha;
Shete, Sanjay;
Amos, Christopher;
Lau, Ching;
Scheurer, Michael;
Tsavachidis, Spiridon;
Armstrong, Georgina;
Houlston, Richard;
Hosking, Fay;
Claus, Elizabeth;
Barnholtz-Sloan, Jill;
Lai, Rose;
Il'yasova, Dora;
Schildkraut, Joellen;
Sadetzki, Siegal;
Johansen, Christoffer

Publication type:

Article

Elucidating the molecular pathogenesis of glioma: integrated germline and somatic profiling of a familial glioma case series.

Published in:

Neuro-Oncology, 2018, v. 20, n. 12, p. 1625, doi. 10.1093/neuonc/noy119

By:

Jacobs, Daniel I;
Fukumura, Kazutaka;
Bainbridge, Matthew N;
Armstrong, Georgina N;
Tsavachidis, Spiridon;
Gu, Xiangjun;
Doddapaneni, Harsha V;
Hu, Jianhong;
Jayaseelan, Joy C;
Muzny, Donna M

Publication type:

Article