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Revisiting barriers to implementation of bioinformatics into life sciences education.
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- Frontiers in Education, 2023, p. 1, doi. 10.3389/feduc.2023.1317191
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- Article
Antibiotics Effects on the Fecal Metabolome in Preterm Infants.
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- Metabolites (2218-1989), 2020, v. 10, n. 8, p. 331, doi. 10.3390/metabo10080331
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Important denominator between autoimmune comorbidities: a review of class II HLA, autoimmune disease, and the gut.
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- Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1270488
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Important denominator between autoimmune comorbidities: a review of class II HLA, autoimmune disease, and the gut.
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- Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1270488
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- Article
Early Childhood Gut Microbiomes Show Strong Geographic Differences Among Subjects at High Risk for Type 1 Diabetes.
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- Diabetes Care, 2015, v. 38, n. 2, p. 329, doi. 10.2337/dc14-0850
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- Article
Seasonal Physiological Parameters and Phytotelmata Bacterial Diversity of Two Bromeliad Species (Aechmea gamosepala and Vriesea platynema) from the Atlantic Forest of Southern Brazil.
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- Diversity (14242818), 2019, v. 11, n. 7, p. 111, doi. 10.3390/d11070111
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The Effect of Tillage System and Crop Rotation on Soil Microbial Diversity and Composition in a Subtropical Acrisol.
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- Diversity (14242818), 2012, v. 4, n. 4, p. 375, doi. 10.3390/d4040375
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TaxCollector: Modifying Current 16S rRNA Databases for the Rapid Classification at Six Taxonomic Levels.
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- Diversity (14242818), 2010, v. 2, n. 7, p. 1015, doi. 10.3390/d2071015
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- Article
Post translational modifications of Trifolitoxin: a blue fluorescent peptide antibiotic.
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- Journal of Antibiotics, 2022, v. 75, n. 3, p. 125, doi. 10.1038/s41429-021-00497-0
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- Article
Biodiversity of diazotrophic bacteria within the soil, root and stem of field-grown maize.
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- Plant & Soil, 2008, v. 302, n. 1/2, p. 91, doi. 10.1007/s11104-007-9458-3
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Quantitative assessments of the host range and strain specificity of endophytic colonization by Klebsiella pneumoniae 342.
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- Plant & Soil, 2003, v. 257, n. 1, p. 49, doi. 10.1023/A:1026242814060
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- Article
Translocation of Oral Microbiota into the Pancreatic Ductal Adenocarcinoma Tumor Microenvironment.
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- Microorganisms, 2023, v. 11, n. 6, p. 1466, doi. 10.3390/microorganisms11061466
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- Article
From Mouth to Muscle: Exploring the Potential Relationship between the Oral Microbiome and Cancer-Related Cachexia.
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- Microorganisms, 2022, v. 10, n. 11, p. 2291, doi. 10.3390/microorganisms10112291
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Unamplified, Long-Read Metagenomic Sequencing Approach to Close Endosymbiont Genomes of Low-Biomass Insect Populations.
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- Microorganisms, 2022, v. 10, n. 3, p. 513, doi. 10.3390/microorganisms10030513
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- Article
Dolomite and Compost Amendments Enhance Cu Phytostabilization and Increase Microbiota of the Leachates from a Cu-Contaminated Soil.
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- Agronomy, 2020, v. 10, n. 5, p. 719, doi. 10.3390/agronomy10050719
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The oral microbiome, pancreatic cancer and human diversity in the age of precision medicine.
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- Microbiome, 2022, v. 10, n. 1, p. 1, doi. 10.1186/s40168-022-01262-7
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- Article
Interactions between specific phytoplankton and bacteria affect lake bacterial community succession.
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- Environmental Microbiology, 2013, v. 15, n. 9, p. 2489, doi. 10.1111/1462-2920.12131
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- Article
Microbial community dynamics in a humic lake: differential persistence of common freshwater phylotypes.
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- Environmental Microbiology, 2006, v. 8, n. 6, p. 956, doi. 10.1111/j.1462-2920.2005.00979.x
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- Article
Temporal changes in gastrointestinal fungi and the risk of autoimmunity during early childhood: the TEDDY study.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30686-w
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Efficiency of Deamidated Gliadin Peptides for Screening Celiac Disease Autoimmunity—Reply.
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- JAMA Pediatrics, 2018, v. 172, n. 5, p. 497, doi. 10.1001/jamapediatrics.2018.0041
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Molecular and serological comparisons of purified xanthine dehydrogenases from root nodules of three ureide-producing legume species.
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- Physiologia Plantarum, 1988, v. 74, n. 1, p. 164, doi. 10.1111/j.1399-3054.1988.tb04958.x
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Integrative analyses of TEDDY Omics data reveal lipid metabolism abnormalities, increased intracellular ROS and heightened inflammation prior to autoimmunity for type 1 diabetes.
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- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02262-w
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pime: A package for discovery of novel differences among microbial communities.
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- Molecular Ecology Resources, 2020, v. 20, n. 2, p. 415, doi. 10.1111/1755-0998.13116
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Expression of a crown gall biological control phenotype in an avirulent strain of Agrobacterium vitis by addition of the trifolitoxin production and resistance genes.
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- BMC Biotechnology, 2002, v. 2, p. 1
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Incubators: Building community networks and developing open educational resources to integrate bioinformatics into life science education.
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- Biochemistry & Molecular Biology Education, 2020, v. 48, n. 4, p. 381, doi. 10.1002/bmb.21387
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Saliva microbiome, dietary, and genetic markers are associated with suicidal ideation in university students.
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- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-18020-2
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Gut microbiome markers in subgroups of HLA class II genotyped infants signal future celiac disease in the general population: ABIS study.
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- Frontiers in Cellular & Infection Microbiology, 2022, v. 12, p. 1, doi. 10.3389/fcimb.2022.920735
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A Six-Day, Lifestyle-Based Immersion Program Mitigates Cardiovascular Risk Factors and Induces Shifts in Gut Microbiota, Specifically Lachnospiraceae , Ruminococcaceae , Faecalibacterium prausnitzii : A Pilot Study.
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- Nutrients, 2021, v. 13, n. 10, p. 3459, doi. 10.3390/nu13103459
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Barriers to integration of bioinformatics into undergraduate life sciences education: A national study of US life sciences faculty uncover significant barriers to integrating bioinformatics into undergraduate instruction.
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- PLoS ONE, 2019, v. 14, n. 11, p. 1, doi. 10.1371/journal.pone.0224288
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Correction: Hepatic glycogen storage diseases are associated to microbial dysbiosis.
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- PLoS ONE, 2019, v. 14, n. 6, p. 1, doi. 10.1371/journal.pone.0218254
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Proof of principle: Physiological transfer of small numbers of bacteria from mother to fetus in late-gestation pregnant sheep.
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- PLoS ONE, 2019, v. 14, n. 6, p. 1, doi. 10.1371/journal.pone.0217211
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- Article
Hepatic glycogen storage diseases are associated to microbial dysbiosis.
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- PLoS ONE, 2019, v. 14, n. 4, p. 1, doi. 10.1371/journal.pone.0214582
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Development of Chemically Defined Media Reveals Citrate as Preferred Carbon Source for Liberibacter Growth.
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- Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.00668
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Construction of Stable Fluorescent Reporter Plasmids for Use in Staphylococcus aureus.
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- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.02491
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Development of a Distance Education Program by a Land-Grant University Augments the 2-Year to 4-Year STEM Pipeline and Increases Diversity in STEM.
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- PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0119548
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Genome Sequence of <i>Candidatus</i> Nitrososphaera evergladensis from Group I.1b Enriched from Everglades Soil Reveals Novel Genomic Features of the Ammonia-Oxidizing Archaea.
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- PLoS ONE, 2014, v. 9, n. 7, p. 1, doi. 10.1371/journal.pone.0101648
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Meconium Microbiome Analysis Identifies Bacteria Correlated with Premature Birth.
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- PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0090784
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Comparative Genomics of Cultured and Uncultured Strains Suggests Genes Essential for Free-Living Growth of <i>Liberibacter</i>.
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- PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0084469
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Gut Microbiome Metagenomics Analysis Suggests a Functional Model for the Development of Autoimmunity for Type 1 Diabetes.
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- PLoS ONE, 2011, v. 6, n. 10, p. 1, doi. 10.1371/journal.pone.0025792
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Lactobacillus johnsonii N6.2 Mitigates the Development of Type 1 Diabetes in BB-DP Rats.
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- PLoS ONE, 2010, v. 5, n. 5, p. 1, doi. 10.1371/journal.pone.0010507
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Microbial hitchhikers on intercontinental dust: catching a lift in Chad.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 4, p. 850, doi. 10.1038/ismej.2012.152
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Toward defining the autoimmune microbiome for type 1 diabetes.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 1, p. 82, doi. 10.1038/ismej.2010.92
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PANGEA: pipeline for analysis of next generation amplicons.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 7, p. 852, doi. 10.1038/ismej.2010.16
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Culture-independent identification of gut bacteria correlated with the onset of diabetes in a rat model.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2009, v. 3, n. 5, p. 536, doi. 10.1038/ismej.2009.5
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Distantly sampled soils carry few species in common.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2008, v. 2, n. 9, p. 901, doi. 10.1038/ismej.2008.55
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Pyrosequencing enumerates and contrasts soil microbial diversity.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2007, v. 1, n. 4, p. 283, doi. 10.1038/ismej.2007.53
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Synchrony in aquatic microbial community dynamics.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2007, v. 1, n. 1, p. 38, doi. 10.1038/ismej.2007.6
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Compromised Gut Microbiota Networks in Children With Anti-Islet Cell Autoimmunity.
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- Diabetes, 2014, v. 63, n. 6, p. 2006, doi. 10.2337/db13-1676
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Selection of transgenic citrus plants based on glyphosate tolerance conferred by a citrus 5-enolpyruvylshikimate-3-phosphate synthase variant.
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- Plant Cell Reports, 2021, v. 40, n. 10, p. 1947, doi. 10.1007/s00299-021-02760-y
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Integrating DNA Methylation and Gene Expression Data in the Development of the Soybean-Bradyrhizobium N<sub>2</sub>-Fixing Symbiosis.
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- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00518
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