Works by Trees, Eija

Results: 24

Genome wide characterization of enterotoxigenic Escherichia coli serogroup O6 isolates from multiple outbreaks and sporadic infections from 1975-2016.

Published in:

PLoS ONE, 2018, v. 13, n. 12, p. 1, doi. 10.1371/journal.pone.0208735

By:

Pattabiraman, Vaishnavi;
Katz, Lee S.;
Chen, Jessica C.;
McCullough, Andre E.;
Trees, Eija

Publication type:

Article

Canonical Single Nucleotide Polymorphisms (SNPs) for High-Resolution Subtyping of Shiga-Toxin Producing Escherichia coli (STEC) O157:H7.

Published in:

PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0131967

By:

Griffing, Sean M.;
MacCannell, Duncan R.;
Schmidtke, Amber J.;
Freeman, Molly M.;
Hyytiä-Trees, Eija;
Gerner-Smidt, Peter;
Ribot, Efrain M.;
Bono, James L.

Publication type:

Article

Outbreak of Shiga Toxin-Producing <i>Escherichia coli</i> (STEC) O157:H7 Associated with Romaine Lettuce Consumption, 2011.

Published in:

PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0055300

By:

Slayton, Rachel B.;
Turabelidze, George;
Bennett, Sarah D.;
Schwensohn, Colin A.;
Yaffee, Anna Q.;
Khan, Faisal;
Butler, Cindy;
Trees, Eija;
Ayers, Tracy L.;
Davis, Marjorie L.;
Laufer, Alison S.;
Gladbach, Stephen;
Williams, Ian;
Gieraltowski, Laura B.

Publication type:

Article

Characterization of Salmonella enterica serovar Enteritidis isolates recovered from blood and stool specimens in Thailand.

Published in:

BMC Microbiology, 2012, v. 12, n. 1, p. 92, doi. 10.1186/1471-2180-12-92

By:

Hendriksen, Rene S.;
Hyytia-Trees, Eija;
Pulsrikarn, Chaiwat;
Pornruangwong, Sirat;
Chaichana, Phattharaporn;
Svendsen, Christina Aaby;
Ahmed, Rafiq;
Mikoleit, Matthew

Publication type:

Article

Notes from the Field: Investigation of an Outbreak of Salmonella Paratyphi B Variant L(+) tartrate + (Java) Associated with Ball Python Exposure - United States, 2017.

Published in:

2018

By:

Krishnasamy, Vikram;
Stevenson, Lauren;
Koski, Lia;
Kellis, Marilee;
Schroeder, Betsy;
Sundararajan, Madhura;
Ladd-Wilson, Stephen;
Sampsel, Ashley;
Mannell, Mike;
Classon, Andrew;
Wagner, Darlene;
Hise, Kelley;
Carleton, Heather;
Trees, Eija;
Schlater, Linda;
Lantz, Kristina;
Nichols, Megin

Publication type:

journal article

Protracted Outbreak of Salmonella Newport Infections Linked to Ground Beef: Possible Role of Dairy Cows - 21 States, 2016-2017.

Published in:

MMWR: Morbidity & Mortality Weekly Report, 2018, v. 67, n. 15, p. 443, doi. 10.15585/mmwr.mm6715a2

By:

Heiman Marshall, Katherine E.;
Tewell, Mackenzie;
Tecle, Selam;
Leeper, Molly;
Sinatra, Jennifer;
Kissler, Bonnie;
Fung, Adrienne;
Brown, Kerri;
Wagner, Darlene;
Trees, Eija;
Hise, Kelley B.;
Chaturvedi, Vishnu;
Schlater, Linda K.;
Morningstar-Shaw, Brenda R.;
Whitlock, Laura;
Holt, Kristin;
Becker, Karen;
Nichols, Megin;
Williams, Ian T.;
Jhung, Michael

Publication type:

Article

Multistate Outbreak of Listeriosis Associated With Jensen Farms Cantaloupe- United States, August--September 2011.

Published in:

JAMA: Journal of the American Medical Association, 2011, v. 306, n. 21, p. 2321

By:

Cosgrove, Shaun;
Cronquist, Alicia;
Wright, Gail;
Ghosh, Tista;
Vogt, Richard;
Teitell, Paul;
Gelfius, Allen;
Spires, Charlotte;
Duvernoy, Tracy;
Merriweather, Sheila;
Freeman, Molly;
Griffin, Patricia M.;
Jackson, Kelly A.;
Joseph, Lavin A.;
Mahon, Barbara E.;
Neil, Karen;
BSilk, Benjamin J.;
Tarr, Cheryl;
RTauxe, Robert;
Trees, Eija

Publication type:

Article

Hospital-Acquired Listeriosis Outbreak Caused by Contaminated Diced Celery—Texas, 2010.

Published in:

Clinical Infectious Diseases, 2013, v. 56, n. 1, p. 20, doi. 10.1093/cid/cis817

By:

Gaul, Linda Knudson;
Farag, Noha H.;
Shim, Trudi;
Kingsley, Monica A.;
Silk, Benjamin J.;
Hyytia-Trees, Eija

Publication type:

Article

A Novel Vehicle for Transmission of Escherichia coli O157:H7 to Humans: Multistate Outbreak of E. coli O157:H7 Infections Associated With Consumption of Ready-to-Bake Commercial Prepackaged Cookie Dough-United States, 2009.

Published in:

Clinical Infectious Diseases, 2012, v. 54, n. 4, p. 511, doi. 10.1093/cid/cir831

By:

Neil, Karen P.;
Biggerstaff, Gwen;
MacDonald, J. Kathryn;
Trees, Eija;
Medus, Carlota;
Musser, Kimberlee A.;
Stroika, Steven G.;
Zink, Don;
Sotir, Mark J.

Publication type:

Article

Gen-FS coordinated proficiency test data for genomic foodborne pathogen surveillance, 2017 and 2018 exercises.

Published in:

Scientific Data, 2020, v. 7, n. 1, p. 1, doi. 10.1038/s41597-020-00740-7

By:

Timme, Ruth E.;
Lafon, Patricia C.;
Balkey, Maria;
Adams, Jennifer K.;
Wagner, Darlene;
Carleton, Heather;
Strain, Errol;
Hoffmann, Maria;
Sabol, Ashley;
Rand, Hugh;
Lindsey, Rebecca;
Sheehan, Deborah;
Baugher, Joseph D.;
Trees, Eija

Publication type:

Article

Laboratory Investigation of Salmonella enterica serovar Poona Outbreak in California: Comparison of Pulsed-Field Gel Electrophoresis (PFGE) and Whole Genome Sequencing (WGS) Results.

Published in:

PLoS Currents, 2016, p. 1, doi. 10.1371/currents.outbreaks.1bb3e36e74bd5779bc43ac3a8dae52e6

By:

Kozyreva, Varvara K.;
Crandall, John;
Sabol, Ashley;
Poe, Alyssa;
Zhang, Peng;
Concepción-Acevedo, Jeniffer;
Schroeder, Morgan N.;
Wagner, Darlene;
Higa, Jeffrey;
Trees, Eija;
Chaturvedi, Vishnu

Publication type:

Article

PulseNet International: Vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance.

Published in:

Eurosurveillance (15607917), 2017, v. 22, n. 23, p. 13, doi. 10.2807/1560-7917.ES.2017.22.23.30544

By:

Nadon, Celine;
Van Walle, Ivo;
Gerner-Smidt, Peter;
Campos, Josefina;
Chinen, Isabel;
Concepcion-Acevedo, Jeniffer;
Gilpin, Brent;
Smith, Anthony M.;
Kai Man Kam;
Perez, Enrique;
Trees, Eija;
Kubota, Kristy;
Takkinen, Johanna;
Nielsen, Eva Møller;
Carleton, Heather

Publication type:

Article

Outbreak of Salmonella Newport Infections Linked to Cucumbers -- United States, 2014.

Published in:

MMWR: Morbidity & Mortality Weekly Report, 2015, v. 64, n. 6, p. 144

By:

Angelo, Kristina M.;
Chu, Alvina;
Anand, Madhu;
Thai-An Nguyen;
Bottichio, Lyndsay;
Wise, Matthew;
Williams, Ian;
Seelman, Sharon;
Bell, Rebecca;
Fatica, Marianne;
Lance, Susan;
Baldwin, Deanna;
Shannon, Kyle;
Lee, Hannah;
Trees, Eija;
Strain, Errol;
Gieraltowski, Laura

Publication type:

Article

Multistate Outbreak of Listeriosis Associated with Jensen Farms Cantaloupe -- United States, August-September 2011.

Published in:

MMWR: Morbidity & Mortality Weekly Report, 2011, v. 60, n. 39, p. 1357

By:

Cosgrove, Shaun;
Cronquist, Alicia;
Wright, Gail;
Ghosh, Tista;
Vogt, Richard;
Teitell, Paul;
Gelfius, Allen;
Spires, Charlotte;
Duvernoy, Tracy;
Merriweather, Sheila;
Freeman, Molly;
Griffin, Patricia M.;
Jackson, Kelly A.;
Joseph, Lavin A.;
Mahon, Barbara E.;
Neil, Karen;
Silk, Benjamin J.;
Tarr, Cheryl;
Tauxe, Robert;
Trees, Eija

Publication type:

Article

Update on Human Salmonella Typhimurium Infections Associated with Aquatic Frogs -- United States, 2009-2011.

Published in:

MMWR: Morbidity & Mortality Weekly Report, 2011, v. 60, n. 19, p. 628

By:

Yaeger, Jill;
Hudecek, Phil;
Fritz, Curtis L.;
Gilliss, Debra;
Vugia, Duc J.;
Inami, Gregory;
Brenden, Rita A.;
Adams, Jennifer K.;
Bopp, Cheryl A.;
Trees, Eija;
Hill, Vincent;
Kahler, Amy;
Pringle, Jeshua;
Williams, Ian;
Behravesh, Casey Barton;
Bennett, Sarah D.;
Mettee, Shauna L.

Publication type:

Article

Evaluating whole-genome sequencing quality metrics for enteric pathogen outbreaks.

Published in:

PeerJ, 2021, p. 1, doi. 10.7717/peerj.12446

By:

Wagner, Darlene D.;
Carleton, Heather A.;
Trees, Eija;
Katz, Lee S.

Publication type:

Article

Shigella sonnei Outbreak Investigation During a Municipal Water Crisis—Genesee and Saginaw Counties, Michigan, 2016.

Published in:

American Journal of Public Health, 2020, v. 110, n. 6, p. 842, doi. 10.2105/AJPH.2020.305577

By:

McClung, R. Paul;
Karwowski, Mateusz;
Castillo, Caroline;
McFadden, Jevon;
Collier, Sarah;
Collins, Jim;
Soehnlen, Marty;
Dietrich, Stephen;
Trees, Eija;
Wilt, Grete;
Harrington, Christina;
Miller, Ashley;
Adam, Elizabeth;
Reses, Hannah;
Cope, Jennifer;
Fullerton, Katie;
Hill, Vincent;
Yoder, Jonathan

Publication type:

Article

Genetic Diversity in Salmonella enterica in Outbreaks of Foodborne and Zoonotic Origin in the USA in 2006–2017.

Published in:

Microorganisms, 2024, v. 12, n. 8, p. 1563, doi. 10.3390/microorganisms12081563

By:

Trees, Eija;
Carleton, Heather A.;
Folster, Jason P.;
Gieraltowski, Laura;
Hise, Kelley;
Leeper, Molly;
Nguyen, Thai-An;
Poates, Angela;
Sabol, Ashley;
Tagg, Kaitlin A.;
Tolar, Beth;
Vasser, Michael;
Webb, Hattie E.;
Wise, Matthew;
Lindsey, Rebecca L.

Publication type:

Article

Notes From the Field: Update on Human Salmonella Typhimurium Infections Associated With Aquatic Frogs--United States, 2009-2011.

Published in:

JAMA: Journal of the American Medical Association, 2011, v. 306, n. 4, p. 376

By:

Yaeger, Jill;
Hudecek, Phil;
Fritz, Curtis L.;
Gilliss, Debra;
Vugia, Duc J.;
Inami, Gregory;
Brenden, Rita A.;
Adams, Jennifer K.;
Bopp, Cheryl A.;
Trees, Eija;
Hill, Vincent;
Kahler, Amy;
Pringle, Jeshua;
Williams, Ian;
Behravesh, Casey Barton;
Bennett, Sarah D.;
Mettee, Shauna L.

Publication type:

Article

Emergence and clonal dissemination of Salmonella enterica serovar Enteritidis causing salmonellosis in Mauritius.

Published in:

Journal of Infection in Developing Countries, 2014, v. 8, n. 4, p. 454, doi. 10.3855/jidc.3695

By:

Issack, Mohammad I.;
Hendriksen, Rene S.;
Hyytiä-Trees, Eija;
Svendsen, Christina A.;
Mikoleit, Matthew

Publication type:

Article

Zoonotic Source Attribution of Salmonella enterica Serotype Typhimurium Using Genomic Surveillance Data, United States.

Published in:

2019

By:

Shaokang Zhang;
Shaoting Li;
Weidong Gu;
den Bakker, Henk;
Boxrud, Dave;
Taylor, Angie;
Roe, Chandler;
Driebe, Elizabeth;
Engelthaler, David M.;
Allard, Marc;
Brown, Eric;
McDermott, Patrick;
Shaohua Zhao;
Bruce, Beau B.;
Trees, Eija;
Fields, Patricia I.;
Xiangyu Deng;
Zhang, Shaokang;
Li, Shaoting;
Gu, Weidong

Publication type:

journal article

Genomic Epidemiology of Salmonella enterica Serotype Enteritidis based on Population Structure of Prevalent Lineages.

Published in:

Emerging Infectious Diseases, 2014, v. 20, n. 9, p. 1481, doi. 10.3201/eid2009.131095

By:

Xiangyu Deng;
Desai, Prerak T.;
den Bakker, Henk C.;
Mikoleit, Matthew;
Tolar, Beth;
Trees, Eija;
Hendriksen, Rene S.;
Frye, Jonathan G.;
Porwollik, Steffen;
Weimer, Bart C.;
Wiedmann, Martin;
Weinstock, George M.;
Fields, Patricia I.;
McClelland, Michael

Publication type:

Article

Phylogenetic analysis of enterohemorrhagic Escherichia coli O157, Germany, 1987-2008.

Published in:

2010

By:

Jenke C;
Harmsen D;
Weniger T;
Rothganger J;
Hyytia-Trees E;
Bielaszewska M;
Karch H;
Mellmann A;
Jenke, Christian;
Harmsen, Dag;
Weniger, Thomas;
Rothganger, Jorg;
Hyytia-Trees, Eija;
Bielaszewska, Martina;
Karch, Helge;
Mellmann, Alexander

Publication type:

journal article

Phylogenetic Analysis of Enterohemorrhagic Escherichia coli O157, Germany, 1987-2008.

Published in:

Emerging Infectious Diseases, 2010, v. 16, n. 4, p. 610, doi. 10.3201/eid1604.091361

By:

Jenke, Christian;
Harmsen, Dag;
Weniger, Thomas;
Rothgänger, Jörg;
Hyytiä-Trees, Eija;
Bielaszewska, Martina;
Karch, Helge;
Mellmann, Alexander

Publication type:

Article