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A hierarchical self‐attention‐guided deep learning framework to predict breast cancer response to chemotherapy using pre‑treatment tumor biopsies.
Published in:
Medical Physics, 2023, v. 50, n. 12, p. 7852, doi. 10.1002/mp.16574
By:
- Saednia, Khadijeh;
- Tran, William T.;
- Sadeghi‑Naini, Ali
Publication type:
Article
Early detection of chemotherapy-refractory patients by monitoring textural alterations in diffuse optical spectroscopic images.
Published in:
Medical Physics, 2015, v. 42, n. 11, p. 6130, doi. 10.1118/1.4931603
By:
- Sadeghi-Naini, Ali;
- Vorauer, Eric;
- Chin, Lee;
- Falou, Omar;
- Tran, William T.;
- Wright, Frances C.;
- Gandhi, Sonal;
- Yaffe, Martin J.;
- Czarnota, Gregory J.
Publication type:
Article
Assessment of tumor response to radiation and vascular targeting therapy in mice using quantitative ultrasound spectroscopy.
Published in:
Medical Physics, 2015, v. 42, n. 8, p. 4965, doi. 10.1118/1.4926554
By:
- El Kaffas, Ahmed;
- Sadeghi‐Naini, Ali;
- Falou, Omar;
- Tran, William Tyler;
- Zhou, Stephanie;
- Hashim, Amr;
- Fernandes, Jason;
- Giles, Anoja;
- Czarnota, Gregory J.
Publication type:
Article
Quantitative digital histopathology and machine learning to predict pathological complete response to chemotherapy in breast cancer patients using pre-treatment tumor biopsies.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-13917-4
By:
- Saednia, Khadijeh;
- Lagree, Andrew;
- Alera, Marie A.;
- Fleshner, Lauren;
- Shiner, Audrey;
- Law, Ethan;
- Law, Brianna;
- Dodington, David W.;
- Lu, Fang-I;
- Tran, William T.;
- Sadeghi-Naini, Ali
Publication type:
Article
Glass microspargers as effective frit spargers in single use bioreactors.
Published in:
Biotechnology Progress, 2023, v. 39, n. 6, p. 1, doi. 10.1002/btpr.3382
By:
- Tran, William;
- Seamans, T. Craig;
- Bowers, John S.
Publication type:
Article
A Canadian national guideline on the neoadjuvant treatment of invasive breast cancer, including patient assessment, systemic therapy, and local management principles.
Published in:
Breast Cancer Research & Treatment, 2022, v. 193, n. 1, p. 1, doi. 10.1007/s10549-022-06522-6
By:
- Gandhi, Sonal;
- Brackstone, Muriel;
- Hong, Nicole J. Look;
- Grenier, Debjani;
- Donovan, Elysia;
- Lu, Fang-I.;
- Skarpathiotakis, Mia;
- Lee, Justin;
- Boileau, Jean-Francois;
- Perera, Francisco;
- Simmons, Christine;
- Joy, Anil A.;
- Tran, William T.;
- The Canadian National Neoadjuvant Breast Cancer Consortium;
- Tyono, Ivan;
- Van Massop, Althea;
- Khalfan, Shelyna
Publication type:
Article
Analysis of tumor nuclear features using artificial intelligence to predict response to neoadjuvant chemotherapy in high-risk breast cancer patients.
Published in:
Breast Cancer Research & Treatment, 2021, v. 186, n. 2, p. 379, doi. 10.1007/s10549-020-06093-4
By:
- Dodington, David W.;
- Lagree, Andrew;
- Tabbarah, Sami;
- Mohebpour, Majid;
- Sadeghi-Naini, Ali;
- Tran, William T.;
- Lu, Fang-I
Publication type:
Article
Validation of the Skin Symptom Assessment (SSA) questionnaire for the evaluation of radiation dermatitis in breast cancer patients.
Published in:
Supportive Care in Cancer, 2024, v. 32, n. 10, p. 1, doi. 10.1007/s00520-024-08890-9
By:
- Kuszaj, Olivia;
- Day, Marley;
- Zhang, Liying;
- Wong, Henry;
- Lee, Shing Fung;
- Kwan, Jennifer Y. Y.;
- Wang, Alyssa J.;
- Bayrakdarian, Sarah;
- Karam, Irene;
- Tran, William;
- Chow, Edward
Publication type:
Article
StrataXRT for the prevention of acute radiation dermatitis in breast cancer: a pilot study.
Published in:
Supportive Care in Cancer, 2024, v. 32, n. 10, p. 1, doi. 10.1007/s00520-024-08851-2
By:
- Kennedy, Samantha K. F.;
- Gojsevic, Milena;
- Rajeswaran, Thenugaa;
- Zhang, Liying;
- Kuszaj, Olivia;
- Day, Marley;
- Karam, Irene;
- Vesprini, Danny;
- Leung, Eric;
- Szumacher, Ewa;
- Rakovitch, Eileen;
- Soliman, Hany;
- Chen, Hanbo;
- Lee, Shing Fung;
- Behroozian, Tara;
- Tran, William;
- Wronski, Matt;
- Gallant, Francois;
- Carothers, Katherine;
- Yewhans, Tiegsti
Publication type:
Article
Patient-reported experience with the use of Mepitel Film for prevention of acute radiation dermatitis in breast cancer.
Published in:
Supportive Care in Cancer, 2024, v. 32, n. 1, p. 1, doi. 10.1007/s00520-023-08302-4
By:
- Gojsevic, Milena;
- Kennedy, Samantha;
- Rajeswaran, Thenugaa;
- Herst, Patries;
- Safavi, Amir H.;
- Corbin, Kimberly;
- Hill, Rosemary;
- Tran, William;
- Carothers, Katherine;
- Gallant, François;
- Trombetta, Mark;
- Arscott, William T.;
- Shariati, Saba;
- Lam, Jacqueline;
- Akkila, Shereen;
- Behroozian, Tara;
- Zhang, Elwyn;
- Karam, Irene;
- Chow, Edward
Publication type:
Article
Perceptions of healthcare professionals on the use of Mepitel Film for the prevention of acute radiation dermatitis in breast cancer.
Published in:
Supportive Care in Cancer, 2023, v. 31, n. 12, p. 1, doi. 10.1007/s00520-023-08205-4
By:
- Rajeswaran, Thenugaa;
- Kennedy, Samantha K. F.;
- Gojsevic, Milena;
- Herst, Patries;
- Safavi, Amir H.;
- Corbin, Kimberly;
- Hill, Rosemary;
- Karam, Irene;
- Tran, William;
- Gallant, François;
- Carothers, Katherine;
- Lam, Jacqueline;
- Trombetta, Mark;
- Arscott, William T.;
- Shariati, Saba;
- Akkila, Shereen;
- Behroozian, Tara;
- Zhang, Elwyn;
- Chow, Edward
Publication type:
Article
OPA1 deletion in brown adipose tissue improves thermoregulation and systemic metabolism via FGF21.
Published in:
eLife, 2021, p. 1, doi. 10.7554/eLife.66519
By:
- Pereira, Renata O.;
- Marti, Alex;
- Olvera, Angela Crystal;
- Tadinada, Satya Murthy;
- Bjorkman, Sarah Hartwick;
- Weatherford, Eric Thomas;
- Morgan, Donald A.;
- Westphal, Michael;
- Patel, Pooja H.;
- Kirby, Ana Karina;
- Hewezi, Rana;
- Trân, William Bùi;
- García-Peña, Luis Miguel;
- Souvenir, Rhonda A.;
- Mittal, Monika;
- Adams, Christopher M;
- Rahmouni, Kamal;
- Potthoff, Matthew J.;
- Abel, E. Dale
Publication type:
Article
Budget Impact Analysis of Preoperative Radioactive Seed Localization.
Published in:
Annals of Surgical Oncology: An Oncology Journal for Surgeons, 2021, v. 28, n. 3, p. 1370, doi. 10.1245/s10434-020-09071-8
By:
- Law, Wyanne;
- Look Hong, Nicole;
- Ravi, Ananth;
- Day, Lisa;
- Somani, Yasmin;
- Wright, Frances C.;
- Nofech-Mozes, Sharon;
- Tran, William T.;
- Curpen, Belinda
Publication type:
Article
Assessment of Digital Pathology Imaging Biomarkers Associated with Breast Cancer Histologic Grade.
Published in:
Current Oncology, 2021, v. 28, n. 6, p. 4298, doi. 10.3390/curroncol28060366
By:
- Lagree, Andrew;
- Shiner, Audrey;
- Alera, Marie Angeli;
- Fleshner, Lauren;
- Law, Ethan;
- Law, Brianna;
- Fang-I Lu;
- Dodington, David;
- Gandhi, Sonal;
- Slodkowska, Elzbieta A.;
- Shenfield, Alex;
- Jerzak, Katarzyna J.;
- Sadeghi-Naini, Ali;
- Tran, William T.
Publication type:
Article
A priori Prediction of Neoadjuvant Chemotherapy Response and Survival in Breast Cancer Patients using Quantitative Ultrasound.
Published in:
Scientific Reports, 2017, p. 45733, doi. 10.1038/srep45733
By:
- Tadayyon, Hadi;
- Sannachi, Lakshmanan;
- Gangeh, Mehrdad J.;
- Kim, Christina;
- Ghandi, Sonal;
- Trudeau, Maureen;
- Pritchard, Kathleen;
- Tran, William T.;
- Slodkowska, Elzbieta;
- Sadeghi-Naini, Ali;
- Czarnota, Gregory J.
Publication type:
Article
Effect of Treatment Sequencing on the Tumor Response to Combined Treatment With Ultrasound‐Stimulated Microbubbles and Radiotherapy.
Published in:
Journal of Ultrasound in Medicine, 2020, v. 39, n. 12, p. 2415, doi. 10.1002/jum.15363
By:
- Klein, Jonathan;
- Tran, William;
- Lai, Priscilla;
- Al‐Mahrouki, Azza;
- Giles, Anoja;
- Czarnota, Gregory J.
Publication type:
Article
Comparative Evaluation of Tumor-Infiltrating Lymphocytes in Companion Animals: Immuno-Oncology as a Relevant Translational Model for Cancer Therapy.
Published in:
Cancers, 2022, v. 14, n. 20, p. 5008, doi. 10.3390/cancers14205008
By:
- Pinard, Christopher J.;
- Lagree, Andrew;
- Lu, Fang-I;
- Klein, Jonathan;
- Oblak, Michelle L.;
- Salgado, Roberto;
- Cardenas, Juan Carlos Pinto;
- Brunetti, Barbara;
- Muscatello, Luisa Vera;
- Sarli, Giuseppe;
- Foschini, Maria Pia;
- Hardas, Alexandros;
- Castillo, Simon P.;
- AbdulJabbar, Khalid;
- Yuan, Yinyin;
- Moore, David A.;
- Tran, William T.
Publication type:
Article
Comparison of methods for texture analysis of QUS parametric images in the characterization of breast lesions.
Published in:
PLoS ONE, 2020, v. 15, n. 12, p. 1, doi. 10.1371/journal.pone.0244965
By:
- Osapoetra, Laurentius O.;
- Chan, William;
- Tran, William;
- Kolios, Michael C.;
- Czarnota, Gregory J.
Publication type:
Article
Tangential Breast Irradiation.
Published in:
Radiation Therapist, 2011, v. 20, n. 2, p. 171
By:
- Tran, William Tyler;
- Gillies, Carol
Publication type:
Article
Quantitative ultrasound radiomics in predicting recurrence for patients with node‐positive head‐neck squamous cell carcinoma treated with radical radiotherapy.
Published in:
Cancer Medicine, 2021, v. 10, n. 8, p. 2579, doi. 10.1002/cam4.3634
By:
- Dasgupta, Archya;
- Fatima, Kashuf;
- DiCenzo, Daniel;
- Bhardwaj, Divya;
- Quiaoit, Karina;
- Saifuddin, Murtuza;
- Karam, Irene;
- Poon, Ian;
- Husain, Zain;
- Tran, William T.;
- Sannachi, Lakshmanan;
- Czarnota, Gregory J.
Publication type:
Article
Quantitative ultrasound radiomics in predicting response to neoadjuvant chemotherapy in patients with locally advanced breast cancer: Results from multi‐institutional study.
Published in:
Cancer Medicine, 2020, v. 9, n. 16, p. 5798, doi. 10.1002/cam4.3255
By:
- DiCenzo, Daniel;
- Quiaoit, Karina;
- Fatima, Kashuf;
- Bhardwaj, Divya;
- Sannachi, Lakshmanan;
- Gangeh, Mehrdad;
- Sadeghi‐Naini, Ali;
- Dasgupta, Archya;
- Kolios, Michael C.;
- Trudeau, Maureen;
- Gandhi, Sonal;
- Eisen, Andrea;
- Wright, Frances;
- Look Hong, Nicole;
- Sahgal, Arjun;
- Stanisz, Greg;
- Brezden, Christine;
- Dinniwell, Robert;
- Tran, William T.;
- Yang, Wei
Publication type:
Article
The incidence of brain metastases among patients with metastatic breast cancer: a systematic review and meta-analysis.
Published in:
Neuro-Oncology, 2021, v. 23, n. 6, p. 894, doi. 10.1093/neuonc/noaa285
By:
- Kuksis, Markus;
- Gao, Yizhuo;
- Tran, William;
- Hoey, Christianne;
- Kiss, Alex;
- Komorowski, Adam S;
- Dhaliwal, Aman J;
- Sahgal, Arjun;
- Das, Sunit;
- Chan, Kelvin K;
- Jerzak, Katarzyna J
Publication type:
Article
Quantitative ultrasound radiomics for therapy response monitoring in patients with locally advanced breast cancer: Multi-institutional study results.
Published in:
PLoS ONE, 2020, v. 15, n. 7, p. 1, doi. 10.1371/journal.pone.0236182
By:
- Quiaoit, Karina;
- DiCenzo, Daniel;
- Fatima, Kashuf;
- Bhardwaj, Divya;
- Sannachi, Lakshmanan;
- Gangeh, Mehrdad;
- Sadeghi-Naini, Ali;
- Dasgupta, Archya;
- Kolios, Michael C.;
- Trudeau, Maureen;
- Gandhi, Sonal;
- Eisen, Andrea;
- Wright, Frances;
- Look-Hong, Nicole;
- Sahgal, Arjun;
- Stanisz, Greg;
- Brezden, Christine;
- Dinniwell, Robert;
- Tran, William T.;
- Yang, Wei
Publication type:
Article
Ultrasound microbubble potentiated enhancement of hyperthermia-effect in tumours.
Published in:
PLoS ONE, 2019, v. 14, n. 12, p. 1, doi. 10.1371/journal.pone.0226475
By:
- Sharma, Deepa;
- Giles, Anoja;
- Hashim, Amr;
- Yip, Jodi;
- Ji, Yipeng;
- Do, Natalie Ngoc Anh;
- Sebastiani, Juliana;
- Tran, William Tyler;
- Farhat, Golnaz;
- Oelze, Michael;
- Czarnota, Gregory J.
Publication type:
Article
Eribulin-induced radiation recall dermatitis: a case report and brief review of the literature.
Published in:
Ecancermedicalscience, 2020, v. 14, n. 996-1019, p. 1, doi. 10.3332/ecancer.2020.1006
By:
- Tran, William T.;
- Ibáñez, Carolina;
- Pinto, Mauricio P.;
- Sanchez, Cesar;
- Czarnota, Gregory J.;
- Merino, Tomas
Publication type:
Article
Cytotoxic agents and radiation therapy: mechanisms of action and clinical applications.
Published in:
2015
By:
- Marrone, Amanda;
- Tran, William T.
Publication type:
Journal Article
Results of a Canadian study examining the prevalence and potential for developing compassion fatigue and burnout in radiation therapists.
Published in:
2014
By:
- Gillies, Carol;
- Bristow, Bonnie;
- Gallant, Francois;
- Osmar, Kari;
- Lange-Mechlen, Irene;
- Tran, William Tyler
Publication type:
Journal Article
A review of vascular disrupting agents as a concomitant anti-tumour modality with radiation.
Published in:
2013
By:
- Tran, William Tyler;
- El Kaffas, Ahmed;
- Al-Mahrouki, Azza;
- Gillies, Carol;
- Czarnota, Gregory Jan
Publication type:
Journal Article
Predicting breast cancer response to neoadjuvant chemotherapy using pretreatment diffuse optical spectroscopic texture analysis.
Published in:
2017
By:
- Tran, William T;
- Gangeh, Mehrdad J;
- Sannachi, Lakshmanan;
- Chin, Lee;
- Watkins, Elyse;
- Bruni, Silvio G;
- Rastegar, Rashin Fallah;
- Curpen, Belinda;
- Trudeau, Maureen;
- Gandhi, Sonal;
- Yaffe, Martin;
- Slodkowska, Elzbieta;
- Childs, Charmaine;
- Sadeghi-Naini, Ali;
- Czarnota, Gregory J
Publication type:
journal article
Locally advanced breast cancer treated with neoadjuvant chemotherapy and adjuvant radiotherapy: a retrospective cohort analysis.
Published in:
2019
By:
- Klein, Jonathan;
- Tran, William;
- Watkins, Elyse;
- Vesprini, Danny;
- Wright, Frances C.;
- Look Hong, Nicole J.;
- Ghandi, Sonal;
- Kiss, Alex;
- Czarnota, Gregory J.
Publication type:
journal article
A review and comparison of breast tumor cell nuclei segmentation performances using deep convolutional neural networks.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-87496-1
By:
- Lagree, Andrew;
- Mohebpour, Majidreza;
- Meti, Nicholas;
- Saednia, Khadijeh;
- Lu, Fang-I.;
- Slodkowska, Elzbieta;
- Gandhi, Sonal;
- Rakovitch, Eileen;
- Shenfield, Alex;
- Sadeghi-Naini, Ali;
- Tran, William T.
Publication type:
Article
Assessment of clinical radiosensitivity in patients with head-neck squamous cell carcinoma from pre-treatment quantitative ultrasound radiomics.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-85221-6
By:
- Osapoetra, Laurentius Oscar;
- Dasgupta, Archya;
- DiCenzo, Daniel;
- Fatima, Kashuf;
- Quiaoit, Karina;
- Saifuddin, Murtuza;
- Karam, Irene;
- Poon, Ian;
- Husain, Zain;
- Tran, William T.;
- Sannachi, Lakshmanan;
- Czarnota, Gregory J.
Publication type:
Article
Redox Sensing within the Genus Shewanella.
Published in:
Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2017.02568
By:
- Harris, Howard W.;
- Sánchez-Andrea, Irene;
- McLean, Jeffrey S.;
- Salas, Everett C.;
- Tran, William;
- El-Naggar, Mohamed Y.;
- Nealson, Kenneth H.
Publication type:
Article
Rapid Discovery and Functional Characterization of Terpene Synthases from Four Endophytic Xylariaceae.
Published in:
PLoS ONE, 2016, v. 11, n. 2, p. 1, doi. 10.1371/journal.pone.0146983
By:
- Wu, Weihua;
- Tran, William;
- Taatjes, Craig A.;
- Alonso-Gutierrez, Jorge;
- Lee, Taek Soon;
- Gladden, John M.
Publication type:
Article
Drivers of Emergency Department Use Among Oncology Patients in the Era of Novel Cancer Therapeutics: A Systematic Review.
Published in:
Oncologist, 2023, v. 28, n. 12, p. 1020, doi. 10.1093/oncolo/oyad161
By:
- Fleshner, Lauren;
- Lagree, Andrew;
- Shiner, Audrey;
- Alera, Marie Angeli;
- Bielecki, Mateusz;
- Grant, Robert;
- Kiss, Alex;
- Krzyzanowska, Monika K;
- Cheng, Ivy;
- Tran, William T;
- Gandhi, Sonal
Publication type:
Article
Treatment Patterns and Outcomes of Women with Symptomatic and Asymptomatic Breast Cancer Brain Metastases: A Single‐Center Retrospective Study.
Published in:
Oncologist, 2021, v. 26, n. 11, p. e1951, doi. 10.1002/onco.13965
By:
- Gao, Yizhuo Kelly;
- Kuksis, Markus;
- Id Said, Badr;
- Chehade, Rania;
- Kiss, Alex;
- Tran, William;
- Sickandar, Faisal;
- Sahgal, Arjun;
- Warner, Ellen;
- Soliman, Hany;
- Jerzak, Katarzyna J.
Publication type:
Article
Predicting Patterns of Distant Metastasis in Breast Cancer Patients following Local Regional Therapy Using Machine Learning.
Published in:
Genes, 2023, v. 14, n. 9, p. 1768, doi. 10.3390/genes14091768
By:
- Shiner, Audrey;
- Kiss, Alex;
- Saednia, Khadijeh;
- Jerzak, Katarzyna J.;
- Gandhi, Sonal;
- Lu, Fang-I;
- Emmenegger, Urban;
- Fleshner, Lauren;
- Lagree, Andrew;
- Alera, Marie Angeli;
- Bielecki, Mateusz;
- Law, Ethan;
- Law, Brianna;
- Kam, Dylan;
- Klein, Jonathan;
- Pinard, Christopher J.;
- Shenfield, Alex;
- Sadeghi-Naini, Ali;
- Tran, William T.
Publication type:
Article
Novel MRI-guided focussed ultrasound stimulated microbubble radiation enhancement treatment for breast cancer.
Published in:
Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-40551-5
By:
- Dasgupta, Archya;
- Saifuddin, Murtuza;
- McNabb, Evan;
- Ho, Ling;
- Lu, Lin;
- Vesprini, Danny;
- Karam, Irene;
- Soliman, Hany;
- Chow, Edward;
- Gandhi, Sonal;
- Trudeau, Maureen;
- Tran, William;
- Curpen, Belinda;
- Stanisz, Greg;
- Sahgal, Arjun;
- Kolios, Michael;
- Czarnota, Gregory J.
Publication type:
Article
Response monitoring of breast cancer patients receiving neoadjuvant chemotherapy using quantitative ultrasound, texture, and molecular features.
Published in:
PLoS ONE, 2018, v. 13, n. 1, p. 1, doi. 10.1371/journal.pone.0189634
By:
- Sannachi, Lakshmanan;
- Gangeh, Mehrdad;
- Tadayyon, Hadi;
- Sadeghi-Naini, Ali;
- Gandhi, Sonal;
- Wright, Frances C.;
- Slodkowska, Elzbieta;
- Curpen, Belinda;
- Tran, William;
- Czarnota, Gregory J.
Publication type:
Article
Towards Precision Oncology: Enhancing Cancer Screening, Diagnosis and Theragnosis Using Artificial Intelligence.
Published in:
Current Oncology, 2022, v. 29, n. 8, p. 5698, doi. 10.3390/curroncol29080449
By:
- Tran, William T.
Publication type:
Article

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