Works by Tombácz, Dóra

Results: 44

Identification of herpesvirus transcripts from genomic regions around the replication origins.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-43344-y

By:

Torma, Gábor;
Tombácz, Dóra;
Csabai, Zsolt;
Almsarrhad, Islam A. A.;
Nagy, Gergely Ármin;
Kakuk, Balázs;
Gulyás, Gábor;
Spires, Lauren McKenzie;
Gupta, Ishaan;
Fülöp, Ádám;
Dörmő, Ákos;
Prazsák, István;
Mizik, Máté;
Dani, Virág Éva;
Csányi, Viktor;
Harangozó, Ákos;
Zádori, Zoltán;
Toth, Zsolt;
Boldogkői, Zsolt

Publication type:

Article

Time-course profiling of bovine alphaherpesvirus 1.1 transcriptome using multiplatform sequencing.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-77520-1

By:

Moldován, Norbert;
Torma, Gábor;
Gulyás, Gábor;
Hornyák, Ákos;
Zádori, Zoltán;
Jefferson, Victoria A.;
Csabai, Zsolt;
Boldogkői, Miklós;
Tombácz, Dóra;
Meyer, Florencia;
Boldogkői, Zsolt

Publication type:

Article

Multiple Long-Read Sequencing Survey of Herpes Simplex Virus Dynamic Transcriptome.

Published in:

Frontiers in Genetics, 2019, p. 1, doi. 10.3389/fgene.2019.00834

By:

Tombácz, Dóra;
Moldován, Norbert;
Balázs, Zsolt;
Gulyás, Gábor;
Csabai, Zsolt;
Boldogkői, Miklós;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Lytic Transcriptome Dataset of Varicella Zoster Virus Generated by Long-Read Sequencing.

Published in:

Frontiers in Genetics, 2018, p. N.PAG, doi. 10.3389/fgene.2018.00460

By:

Tombácz, Dóra;
Prazsák, István;
Moldován, Norbert;
Szűcs, Attila;
Boldogkői, Zsolt

Publication type:

Article

Dual Platform Long-Read RNA-Sequencing Dataset of the Human Cytomegalovirus Lytic Transcriptome.

Published in:

Frontiers in Genetics, 2018, p. 1, doi. 10.3389/fgene.2018.00432

By:

Balázs, Zsolt;
Tombácz, Dóra;
Szücs, Attila;
Snyder, Michael;
Boldogköi, Zsolt

Publication type:

Article

Novel classes of replication-associated transcripts discovered in viruses.

Published in:

RNA Biology, 2019, v. 16, n. 2, p. 166, doi. 10.1080/15476286.2018.1564468

By:

Boldogkői, Zsolt;
Balázs, Zsolt;
Moldován, Norbert;
Prazsák, István;
Tombácz, Dóra

Publication type:

Article

Evaluation of the impact of ul54 gene-deletion on the global transcription and DNA replication of pseudorabies virus.

Published in:

Archives of Virology, 2017, v. 162, n. 9, p. 2679, doi. 10.1007/s00705-017-3420-3

By:

Csabai, Zsolt;
Takács, Irma;
Snyder, Michael;
Boldogkői, Zsolt;
Tombácz, Dóra

Publication type:

Article

Cross-comparison of gut metagenomic profiling strategies.

Published in:

Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-07158-6

By:

Gulyás, Gábor;
Kakuk, Balázs;
Dörmő, Ákos;
Járay, Tamás;
Prazsák, István;
Csabai, Zsolt;
Henkrich, Miksa Máté;
Boldogkői, Zsolt;
Tombácz, Dóra

Publication type:

Article

Full-Length Isoform Sequencing Reveals Novel Transcripts and Substantial Transcriptional Overlaps in a Herpesvirus.

Published in:

PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0162868

By:

Tombácz, Dóra;
Csabai, Zsolt;
Oláh, Péter;
Balázs, Zsolt;
Likó, István;
Zsigmond, Laura;
Sharon, Donald;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Integrative profiling of Epstein–Barr virus transcriptome using a multiplatform approach.

Published in:

Virology Journal, 2022, v. 19, n. 1, p. 1, doi. 10.1186/s12985-021-01734-6

By:

Fülöp, Ádám;
Torma, Gábor;
Moldován, Norbert;
Szenthe, Kálmán;
Bánáti, Ferenc;
Almsarrhad, Islam A. A.;
Csabai, Zsolt;
Tombácz, Dóra;
Minárovits, János;
Boldogkői, Zsolt

Publication type:

Article

Ex vivo infection of human embryonic spinal cordneurons prior to transplantation into adult mousecord.

Published in:

BMC Neuroscience, 2010, v. 11, p. 65, doi. 10.1186/1471-2202-11-65

By:

Márton, Gábor;
Tombácz, Dóra;
Tóth, Judit S.;
Szabó, András;
Boldogköi, Zsolt;
Dénes, Ádám;
Hornyák, Ákos;
Nógrádi, Antal

Publication type:

Article

Characterization of pseudorabies virus transcriptome by Illumina sequencing.

Published in:

BMC Microbiology, 2015, v. 15, n. 1, p. 1, doi. 10.1186/s12866-015-0470-0

By:

Oláh, Péter;
Tombácz, Dóra;
Póka, Nándor;
Csabai, Zsolt;
Prazsák, István;
Boldogkoi, Zsolt

Publication type:

Article

The effects of viral load on pseudorabies virus gene expression.

Published in:

BMC Microbiology, 2010, v. 10, p. 311, doi. 10.1186/1471-2180-10-311

By:

Tóth, Judit S.;
Tombácz, Dóra;
Takács, Irma F.;
Boldogkői, Zsolt

Publication type:

Article

Long-read sequencing uncovers a complex transcriptome topology in varicella zoster virus.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5267-8

By:

Prazsák, István;
Moldován, Norbert;
Balázs, Zsolt;
Tombácz, Dóra;
Szűcs, Attila;
Csabai, Zsolt;
Boldogkői, Zsolt;
Megyeri, Klára

Publication type:

Article

Evaluation of whole exome sequencing as an alternative to BeadChip and whole genome sequencing in human population genetic analysis.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. N.PAG, doi. 10.1186/s12864-018-5168-x

By:

Maróti, Zoltán;
Boldogkői, Zsolt;
Tombácz, Dóra;
Snyder, Michael;
Kalmár, Tibor

Publication type:

Article

Herpesvirus-Mediated Delivery of a Genetically Encoded Fluorescent Ca<sup>2+</sup> Sensor to Canine Cardiomyocytes.

Published in:

Journal of Biomedicine & Biotechnology, 2009, p. 1, doi. 10.1155/2009/361795

By:

Prorok, János;
Kovács, Péter P.;
Kristóf, Attila A.;
Nagy, Norbert;
Tombácz, Dóra;
Tóth, Judit S.;
Ördög, Balázs;
Jost, Norbert;
Virág, László;
Papp, Julius G.;
Varró, András;
Tóth, András;
Boldogkői, Zsolt

Publication type:

Article

The ICP22 protein selectively modifies the transcription of different kinetic classes of pseudorabies virus genes.

Published in:

BMC Molecular Biology, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2199-14-2

By:

Takács, Irma F.;
Tombácz, Dóra;
Berta, Beáta;
Prazsák, István;
Póka, Nándor;
Boldogkői, Zsolt

Publication type:

Article

Multi-Platform Sequencing Approach Reveals a Novel Transcriptome Profile in Pseudorabies Virus.

Published in:

Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2017.02708

By:

Moldován, Norbert;
Tombácz, Dóra;
Szűcs, Attila;
Csabai, Zsolt;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Long-Read Isoform Sequencing Reveals a Hidden Complexity of the Transcriptional Landscape of Herpes Simplex Virus Type 1.

Published in:

Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01079

By:

Tombácz, Dóra;
Csabai, Zsolt;
Szűcs, Attila;
Balázs, Zsolt;
Moldován, Norbert;
Sharon, Donald;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Analysis of the Complete Genome Sequence of a Novel, Pseudorabies Virus Strain Isolated in Southeast Europe.

Published in:

Canadian Journal of Infectious Diseases & Medical Microbiology, 2019, p. 1, doi. 10.1155/2019/1806842

By:

Csabai, Zsolt;
Tombácz, Dóra;
Deim, Zoltán;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Meta-analytic approach for transcriptome profiling of herpes simplex virus type 1.

Published in:

Scientific Data, 2020, v. 7, n. 1, p. 1, doi. 10.1038/s41597-020-0558-8

By:

Tombácz, Dóra;
Torma, Gábor;
Gulyás, Gábor;
Moldován, Norbert;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Nanopore Assay Reveals Cell-Type-Dependent Gene Expression of Vesicular Stomatitis Indiana Virus and Differential Host Cell Response.

Published in:

Pathogens, 2021, v. 10, n. 9, p. 1, doi. 10.3390/pathogens10091196

By:

Kakuk, Balázs;
Kiss, András Attila;
Torma, Gábor;
Csabai, Zsolt;
Prazsák, István;
Mizik, Máté;
Megyeri, Klára;
Tombácz, Dóra;
Boldogkői, Zsolt

Publication type:

Article

Time-Course Transcriptome Profiling of a Poxvirus Using Long-Read Full-Length Assay.

Published in:

Pathogens, 2021, v. 10, n. 8, p. 919, doi. 10.3390/pathogens10080919

By:

Tombácz, Dóra;
Prazsák, István;
Torma, Gábor;
Csabai, Zsolt;
Balázs, Zsolt;
Moldován, Norbert;
Dénes, Béla;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

An Integrated Sequencing Approach for Updating the Pseudorabies Virus Transcriptome.

Published in:

Pathogens, 2021, v. 10, n. 2, p. 242, doi. 10.3390/pathogens10020242

By:

Torma, Gábor;
Tombácz, Dóra;
Csabai, Zsolt;
Göbhardter, Dániel;
Deim, Zoltán;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Dual isoform sequencing reveals complex transcriptomic and epitranscriptomic landscapes of a prototype baculovirus.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-05457-8

By:

Torma, Gábor;
Tombácz, Dóra;
Moldován, Norbert;
Fülöp, Ádám;
Prazsák, István;
Csabai, Zsolt;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Combined nanopore and single-molecule real-time sequencing survey of human betaherpesvirus 5 transcriptome.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-93593-y

By:

Kakuk, Balázs;
Tombácz, Dóra;
Balázs, Zsolt;
Moldován, Norbert;
Csabai, Zsolt;
Torma, Gábor;
Megyeri, Klára;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Time course profiling of host cell response to herpesvirus infection using nanopore and synthetic long-read transcriptome sequencing.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-93142-7

By:

Maróti, Zoltán;
Tombácz, Dóra;
Moldován, Norbert;
Torma, Gábor;
Jefferson, Victoria A.;
Csabai, Zsolt;
Gulyás, Gábor;
Dörmő, Ákos;
Boldogkői, Miklós;
Kalmár, Tibor;
Meyer, Florencia;
Boldogkői, Zsolt

Publication type:

Article

Template-switching artifacts resemble alternative polyadenylation.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6199-7

By:

Balázs, Zsolt;
Tombácz, Dóra;
Csabai, Zsolt;
Moldován, Norbert;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Long-Read Sequencing Revealed an Extensive Transcript Complexity in Herpesviruses.

Published in:

Frontiers in Genetics, 2018, p. N.PAG, doi. 10.3389/fgene.2018.00259

By:

Tombácz, Dóra;
Balázs, Zsolt;
Csabai, Zsolt;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Characterization of the Dynamic Transcriptome of a Herpesvirus with Long-read Single Molecule Real-Time Sequencing.

Published in:

Scientific Reports, 2017, p. 43751, doi. 10.1038/srep43751

By:

Tombácz, Dóra;
Balázs, Zsolt;
Csabai, Zsolt;
Moldován, Norbert;
Szűcs, Attila;
Sharon, Donald;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

High temporal resolution Nanopore sequencing dataset of SARS-CoV-2 and host cell RNAs.

Published in:

GigaScience, 2022, v. 11, p. 1, doi. 10.1093/gigascience/giac094

By:

Tombácz, Dóra;
Dörmő, Ákos;
Gulyás, Gábor;
Csabai, Zsolt;
Prazsák, István;
Kakuk, Balázs;
Harangozó, Ákos;
Jankovics, István;
Dénes, Béla;
Boldogkői, Zsolt

Publication type:

Article

Dynamic transcriptome profiling dataset of vaccinia virus obtained from long-read sequencing techniques.

Published in:

GigaScience, 2018, v. 7, n. 12, p. N.PAG, doi. 10.1093/gigascience/giy139

By:

Tombácz, Dóra;
Prazsák, István;
Szűcs, Attila;
Dénes, Béla;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Dynamic Transcriptome Sequencing of Bovine Alphaherpesvirus Type 1 and Host Cells Carried Out by a Multi-Technique Approach.

Published in:

Frontiers in Genetics, 2021, v. 11, p. N.PAG, doi. 10.3389/fgene.2021.619056

By:

Tombácz, Dóra;
Moldován, Norbert;
Torma, Gábor;
Nagy, Tibor;
Hornyák, Ákos;
Csabai, Zsolt;
Gulyás, Gábor;
Boldogkői, Miklós;
Jefferson, Victoria A.;
Zádori, Zoltán;
Meyer, Florencia;
Boldogkői, Zsolt

Publication type:

Article

Short and Long-Read Sequencing Survey of the Dynamic Transcriptomes of African Swine Fever Virus and the Host Cells.

Published in:

Frontiers in Genetics, 2020, v. 11, p. 1, doi. 10.3389/fgene.2020.00758

By:

Olasz, Ferenc;
Tombácz, Dóra;
Torma, Gábor;
Csabai, Zsolt;
Moldován, Norbert;
Dörmő, Ákos;
Prazsák, István;
Mészáros, István;
Magyar, Tibor;
Tamás, Vivien;
Zádori, Zoltán;
Boldogkői, Zsolt

Publication type:

Article

In-Depth Temporal Transcriptome Profiling of an Alphaherpesvirus Using Nanopore Sequencing.

Published in:

Viruses (1999-4915), 2022, v. 14, n. 6, p. N.PAG, doi. 10.3390/v14061289

By:

Tombácz, Dóra;
Kakuk, Balázs;
Torma, Gábor;
Csabai, Zsolt;
Gulyás, Gábor;
Tamás, Vivien;
Zádori, Zoltán;
Jefferson, Victoria A.;
Meyer, Florencia;
Boldogkői, Zsolt

Publication type:

Article

Combined Short and Long-Read Sequencing Reveals a Complex Transcriptomic Architecture of African Swine Fever Virus.

Published in:

Viruses (1999-4915), 2021, v. 13, n. 4, p. 579, doi. 10.3390/v13040579

By:

Torma, Gábor;
Tombácz, Dóra;
Csabai, Zsolt;
Moldován, Norbert;
Mészáros, István;
Zádori, Zoltán;
Boldogkői, Zsolt;
Borca, Manuel

Publication type:

Article

Characterization of Novel Transcripts in Pseudorabies Virus.

Published in:

Viruses (1999-4915), 2015, v. 7, n. 5, p. 2727, doi. 10.3390/v7052727

By:

Tombácz, Dóra;
Csabai, Zsolt;
Oláh, Péter;
Havelda, Zoltán;
Sharon, Donald;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Interactions between the transcription and replication machineries regulate the RNA and DNA synthesis in the herpesviruses.

Published in:

Virus Genes, 2019, v. 55, n. 3, p. 274, doi. 10.1007/s11262-019-01643-5

By:

Boldogkői, Zsolt;
Tombácz, Dóra;
Balázs, Zsolt

Publication type:

Article

Deletion of the us7 and us8 genes of pseudorabies virus exerts a differential effect on the expression of early and late viral genes.

Published in:

Virus Genes, 2017, v. 53, n. 4, p. 603, doi. 10.1007/s11262-017-1465-8

By:

Póka, Nándor;
Csabai, Zsolt;
Pásti, Emese;
Tombácz, Dóra;
Boldogkői, Zsolt

Publication type:

Article

Time-course transcriptome analysis of host cell response to poxvirus infection using a dual long-read sequencing approach.

Published in:

BMC Research Notes, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13104-021-05657-x

By:

Maróti, Zoltán;
Tombácz, Dóra;
Prazsák, István;
Moldován, Norbert;
Csabai, Zsolt;
Torma, Gábor;
Balázs, Zsolt;
Kalmár, Tibor;
Dénes, Béla;
Snyder, Michael;
Boldogkői, Zsolt

Publication type:

Article

Whole-genome analysis of pseudorabies virus gene expression by real-time quantitative RT-PCR assay.

Published in:

BMC Genomics, 2009, v. 10, p. 491, doi. 10.1186/1471-2164-10-491

By:

Tombácz, Dóra;
Tóth, Judit S.;
Petrovszki, Pál;
Boldogkoi, Zsolt

Publication type:

Article

Temporal transcriptional profiling of host cells infected by a veterinary alphaherpesvirus using nanopore sequencing.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-87536-0

By:

Tombácz, Dóra;
Maróti, Zoltán;
Oláh, Péter;
Dörmő, Ákos;
Gulyás, Gábor;
Kalmár, Tibor;
Csabai, Zsolt;
Boldogkői, Zsolt

Publication type:

Article

Mapping the temporal transcriptomic signature of a viral pathogen through CAGE and nanopore sequencing.

Published in:

PLoS ONE, 2025, v. 20, n. 4, p. 1, doi. 10.1371/journal.pone.0320439

By:

Tombácz, Dóra;
Kakuk, Balázs;
Torma, Gábor;
Fülöp, Ádám;
Dörmő, Ákos;
Gulyás, Gábor;
Csabai, Zsolt;
Boldogkői, Zsolt

Publication type:

Article

Genetically timed, activity-sensor and rainbow transsynaptic viral tools.

Published in:

Nature Methods, 2009, v. 6, n. 2, p. 127, doi. 10.1038/nmeth.1292

By:

Boldogkői, Zsolt;
Balint, Kamill;
Awatramani, Gautam B;
Balya, David;
Busskamp, Volker;
Viney, Tim James;
Lagali, Pamela S;
Duebel, Jens;
Pásti, Emese;
Tombácz, Dóra;
Tóth, Judit S;
Takács, Irma F;
Scherf, Brigitte Gross;
Roska, Botond

Publication type:

Article