Works by Tomaru, Yuji

Results: 30

Automated Detection of Harmful Red Tide Phytoplankton Using Deep Learning-Based Object Detection Models.

Published in:

International Journal of Automation Technology, 2025, v. 19, n. 4, p. 642, doi. 10.20965/ijat.2025.p0642

By:

Kawano, Tomoka;
Migita, Masahiro;
Kamimura, Kaito;
Urabe, Atsushi;
Yamaguchi, Haruo;
Sakamoto, Setsuko;
Tomaru, Yuji;
Toda, Masashi

Publication type:

Article

Development of a method to assess the ichthyotoxicity of the harmful marine microalgae Karenia spp. using gill cell cultures from red sea bream ( Pagrus major ).

Published in:

Fish Physiology & Biochemistry, 2017, v. 43, n. 6, p. 1603, doi. 10.1007/s10695-017-0396-6

By:

Ohkubo, Nobuyuki;
Tomaru, Yuji;
Yamaguchi, Haruo;
Kitatsuji, Saho;
Mochida, Kazuhiko

Publication type:

Article

Occurrence of the planktonic bloom-forming marine diatom Chaetoceros tenuissimus Meunier and its infectious viruses in western Japan.

Published in:

Hydrobiologia, 2018, v. 805, n. 1, p. 221, doi. 10.1007/s10750-017-3306-0

By:

Tomaru, Yuji;
Toyoda, Kensuke;
Kimura, Kei

Publication type:

Article

New single-stranded DNA virus with a unique genomic structure that infects marine diatom Chaetoceros setoensis.

Published in:

Scientific Reports, 2013, p. 1, doi. 10.1038/srep03337

By:

Yuji Tomaru;
Kensuke Toyoda;
Hidekazu Suzuki;
Tamotsu Nagumo;
Kei Kimura;
Yoshitake Takao

Publication type:

Article

Occurrence of Takayama (Dinophyceae) in Uranouchi Inlet, Japan.

Published in:

Plankton & Benthos Research, 2022, v. 17, n. 1, p. 100, doi. 10.3800/pbr.17.100

By:

HARUO YAMAGUCHI;
YUJI TOMARU

Publication type:

Article

Rapid quantification of viable cells of the planktonic diatom Chaetoceros tenuissimus and associated RNA viruses in culture.

Published in:

Plankton & Benthos Research, 2016, v. 11, n. 1, p. 9, doi. 10.3800/pbr.11.9

By:

YUJI TOMARU;
KEI KIMURA

Publication type:

Article

Structural Insights into Common and Host-Specific Receptor-Binding Mechanisms in Algal Picorna-like Viruses.

Published in:

Viruses (1999-4915), 2022, v. 14, n. 11, p. 2369, doi. 10.3390/v14112369

By:

Wang, Han;
Munke, Anna;
Li, Siqi;
Tomaru, Yuji;
Okamoto, Kenta

Publication type:

Article

RNA Viruses in Aquatic Unicellular Eukaryotes.

Published in:

Viruses (1999-4915), 2021, v. 13, n. 3, p. 362, doi. 10.3390/v13030362

By:

Sadeghi, Mohammadreza;
Tomaru, Yuji;
Ahola, Tero;
Quax, Tessa E.F.;
De Paepe, Marianne;
Holmfeldt, Karin

Publication type:

Article

Visualization of a Dinoflagellate-Infecting Virus HcDNAV and Its Infection Process.

Published in:

Viruses (1999-4915), 2018, v. 10, n. 10, p. 554, doi. 10.3390/v10100554

By:

Takano, Yoshihito;
Tomaru, Yuji;
Nagasaki, Keizo

Publication type:

Article

Novel marine diatom ssRNA virus NitRevRNAV infecting Nitzschia reversa.

Published in:

Plant Ecology & Evolution, 2019, v. 152, n. 2, p. 178, doi. 10.5091/plecevo.2019.1615

By:

Kensuke Toyoda;
Kei Kimura;
Keigo Osada;
Williams, David M.;
Tomoko Adachi;
Katsumasa Yamada;
Yuji Tomaru

Publication type:

Article

Selective utilization of phosphorus compounds by Chaetoceros tenuissimus (Bacillariophyceae): Approach using <sup>31</sup>P nuclear magnetic resonance analysis.

Published in:

Phycological Research, 2022, v. 70, n. 3, p. 151, doi. 10.1111/pre.12485

By:

Yamaguchi, Haruo;
Zaima, Masaki;
Adachi, Masao;
Tomaru, Yuji;
Asahara, Haruyasu;
Nishiwaki, Nagatoshi

Publication type:

Article

Previously unknown ssDNA molecules co‐occurring with CdebDNAV infecting the marine planktonic diatom Chaetoceros debilis.

Published in:

Phycological Research, 2020, v. 68, n. 4, p. 269, doi. 10.1111/pre.12435

By:

Tomaru, Yuji;
Toyoda, Kensuke;
Kimura, Kei

Publication type:

Article

Isolation and characterization of a single-stranded RNA virus that infects the marine planktonic diatom Chaetoceros sp. ( SS08- C03).

Published in:

Phycological Research, 2013, v. 61, n. 1, p. 27, doi. 10.1111/j.1440-1835.2012.00670.x

By:

Tomaru, Yuji;
Toyoda, Kensuke;
Kimura, Kei;
Takao, Yoshitake;
Sakurada, Kiyonari;
Nakayama, Natsuko;
Nagasaki, Keizo

Publication type:

Article

Virus resistance in the toxic bloom-forming dinoflagellate Heterocapsa circularisquama to single-stranded RNA virus infection.

Published in:

Environmental Microbiology, 2009, v. 11, n. 11, p. 2915, doi. 10.1111/j.1462-2920.2009.02047.x

By:

Tomaru, Yuji;
Mizumoto, Hiroyuki;
Nagasaki, Keizo

Publication type:

Article

Ecological dynamics of the bivalve-killing dinoflagellate Heterocapsa circularisquama and its infectious viruses in different locations of western Japan.

Published in:

Environmental Microbiology, 2007, v. 9, n. 6, p. 1376, doi. 10.1111/j.1462-2920.2007.01252.x

By:

Tomaru, Yuji;
Hata, Naotsugu;
Masuda, Takeshi;
Tsuji, Masaharu;
Igata, Kuniyoshi;
Masuda, Yuji;
Yamatogi, Toshifumi;
Sakaguchi, Masao;
Nagasaki, Keizo

Publication type:

Article

Flow cytometric detection and enumeration of DNA and RNA viruses infecting marine eukaryotic microalgae.

Published in:

Journal of Oceanography, 2007, v. 63, n. 2, p. 215, doi. 10.1007/s10872-007-0023-8

By:

Yuji Tomaru;
Keizo Nagasaki

Publication type:

Article

First evidence for the existence of pennate diatom viruses.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 7, p. 1445, doi. 10.1038/ismej.2011.207

By:

Tomaru, Yuji;
Toyoda, Kensuke;
Kimura, Kei;
Hata, Naotsugu;
Yoshida, Mikihide;
Nagasaki, Keizo

Publication type:

Article

PREDATION BY THE TOXIC DINOFLAGELLATE DINOPHYSIS FORTII ON THE CILIATE MYRIONECTA RUBRA AND OBSERVATION OF SEQUESTRATION OF CILIATE CHLOROPLASTS.

Published in:

Journal of Phycology, 2008, v. 44, n. 4, p. 909, doi. 10.1111/j.1529-8817.2008.00544.x

By:

Nagai, Satoshi;
Nitshitani, Goh;
Tomaru, Yuji;
Sakiyama, Sanae;
Kamiyama, Takashi

Publication type:

Article

Respiration rates of the Japanese pearl oyster, Pinctada fucata martensii , feeding on Pavlova lutheri and Chaetoceros gracilis.

Published in:

Aquaculture Research, 2002, v. 33, n. 1, p. 33, doi. 10.1046/j.1355-557X.2001.00640.x

By:

Tomaru, Yuji;
Ebisuzaki, Sachi;
Kawabata, Zen'ichiro;
Nakano, Shin-ichi

Publication type:

Article

Establishment of a simple method for cryopreservation of the marine diatoms, Chaetoceros and Phaeodactylum.

Published in:

Journal of Applied Phycology, 2023, v. 35, n. 5, p. 2285, doi. 10.1007/s10811-023-03040-w

By:

Yamaguchi, Haruo;
Sumida, Narumi;
Matsukawa, Kazutsugu;
Adachi, Masao;
Tomaru, Yuji;
Ishikawa, Kosuke;
Hotta, Jun-ichi

Publication type:

Article

Ecology, physiology and genetics of a phycodnavirus infecting the noxious bloom-forming raphidophyte Heterosigma akashiwo.

Published in:

Fisheries Science, 2008, v. 74, n. 4, p. 701, doi. 10.1111/j.1444-2906.2008.01580.x

By:

Tomaru, Yuji;
Shirai, Yoko;
Nagasaki, Keizo

Publication type:

Article

Novel Protocol for Estimating Viruses Specifically Infecting the Marine Planktonic Diatoms.

Published in:

Diversity (14242818), 2020, v. 12, n. 6, p. 225, doi. 10.3390/d12060225

By:

Tomaru, Yuji;
Kimura, Kei

Publication type:

Article

Utilization of phosphate diesters by phosphodiesterase-producing marine diatoms.

Published in:

Journal of Plankton Research, 2014, v. 36, n. 1, p. 281, doi. 10.1093/plankt/fbt091

By:

Yamaguchi, Haruo;
Arisaka, Hiroshi;
Otsuka, Naoki;
Tomaru, Yuji

Publication type:

Article

RNA Sequencing Revealed Numerous Polyketide Synthase Genes in the Harmful Dinoflagellate Karenia mikimotoi.

Published in:

PLoS ONE, 2015, v. 10, n. 10, p. 1, doi. 10.1371/journal.pone.0142731

By:

Kimura, Kei;
Okuda, Shujiro;
Nakayama, Kei;
Shikata, Tomoyuki;
Takahashi, Fumio;
Yamaguchi, Haruo;
Skamoto, Setsuko;
Yamaguchi, Mineo;
Tomaru, Yuji

Publication type:

Article

Ecological Dynamics of Two Distinct Viruses Infecting Marine Eukaryotic Decomposer Thraustochytrids (Labyrinthulomycetes, Stramenopiles).

Published in:

PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0133395

By:

Takao, Yoshitake;
Tomaru, Yuji;
Nagasaki, Keizo;
Honda, Daiske

Publication type:

Article

Isolation and Characterization of a Single-Stranded DNA Virus Infecting the Marine Diatom <i>Chaetoceros</i> sp. Strain SS628-11 Isolated from Western JAPAN.

Published in:

PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0082013

By:

Kimura, Kei;
Tomaru, Yuji

Publication type:

Article

Chronological age-related metabolome responses in the dinoflagellate Karenia mikimotoi, can predict future bloom demise.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-04646-z

By:

Hano, Takeshi;
Tomaru, Yuji

Publication type:

Article

The genome of the diatom Chaetoceros tenuissimus carries an ancient integrated fragment of an extant virus.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-00565-3

By:

Hongo, Yuki;
Kimura, Kei;
Takaki, Yoshihiro;
Yoshida, Yukari;
Baba, Shuichiro;
Kobayashi, Genta;
Nagasaki, Keizo;
Hano, Takeshi;
Tomaru, Yuji

Publication type:

Article

Seasonal change of seston size distribution and phytoplankton composition in bivalve pearl oyster Pinctada fucata martensii culture farm.

Published in:

Hydrobiologia, 2002, v. 481, n. 1-3, p. 181, doi. 10.1023/A:1021232832390

By:

Tomaru, Yuji;
Udaka, Namiko;
Kawabata, Zen'ichiro;
Nakano, Shin-ichi

Publication type:

Article

Characterization of marine diatom-infecting virus promoters in the model diatom Phaeodactylum tricornutum.

Published in:

Scientific Reports, 2015, p. 18708, doi. 10.1038/srep18708

By:

Kadono, Takashi;
Miyagawa-Yamaguchi, Arisa;
Kira, Nozomu;
Tomaru, Yuji;
Okami, Takuma;
Yoshimatsu, Takamichi;
Hou, Liyuan;
Ohama, Takeshi;
Fukunaga, Kazunari;
Okauchi, Masanori;
Yamaguchi, Haruo;
Ohnishi, Kohei;
Falciatore, Angela;
Adachi, Masao

Publication type:

Article