Works matching AU Tiffin, Peter

Results: 85

Epigenetic and Genetic Influences on DNA Methylation Variation in Maize Populations.

Published in:

Plant Cell, 2013, v. 25, n. 8, p. 2783, doi. 10.1105/tpc.113.114793

By:

Eichten, Steven R.;
Briskine, Roman;
Song, Jawon;
Li, Qing;
Swanson-Wagner, Ruth;
Hermanson, Peter J.;
Waters, Amanda J.;
Starr, Evan;
West, Patrick T.;
Tiffin, Peter;
Myers, Chad L.;
Vaughn, Matthew W.;
Springer, Nathan M.

Publication type:

Article

Comparative population genomics of maize domestication and improvement.

Published in:

Nature Genetics, 2012, v. 44, n. 7, p. 808, doi. 10.1038/ng.2309

By:

Hufford, Matthew B;
Xu, Xun;
van Heerwaarden, Joost;
Pyhäjärvi, Tanja;
Chia, Jer-Ming;
Cartwright, Reed A;
Elshire, Robert J;
Glaubitz, Jeffrey C;
Guill, Kate E;
Kaeppler, Shawn M;
Lai, Jinsheng;
Morrell, Peter L;
Shannon, Laura M;
Song, Chi;
Springer, Nathan M;
Swanson-Wagner, Ruth A;
Tiffin, Peter;
Wang, Jun;
Zhang, Gengyun;
Doebley, John

Publication type:

Article

Candidate Genes and Genetic Architecture of Symbiotic and Agronomic Traits Revealed by Whole-Genome, Sequence-Based Association Genetics in Medicago truncatula

Published in:

PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0065688

By:

Stanton-Geddes, John;
Paape, Timothy;
Epstein, Brendan;
Briskine, Roman;
Yoder, Jeremy;
Mudge, Joann;
Bharti, Arvind K.;
Farmer, Andrew D.;
Zhou, Peng;
Denny, Roxanne;
May, Gregory D.;
Erlandson, Stephanie;
Yakub, Mohammed;
Sugawara, Masayuki;
Sadowsky, Michael J.;
Young, Nevin D.;
Tiffin, Peter

Publication type:

Article

Host Genotype Shapes the Foliar Fungal Microbiome of Balsam Poplar (Populus balsamifera).

Published in:

PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0053987

By:

lint, Miklo ´ sBa ´;
Tiffin, Peter;
¨m, Bjo ¨ rn Hallstro;
O'Hara, Robert B.;
Olson, Matthew S.;
Fankhauser, Johnathon D.;
Piepenbring, Meike;
Schmitt, Imke

Publication type:

Article

Interactions between Soil Habitat and Geographic Range Location Affect Plant Fitness.

Published in:

PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0036015

By:

Stanton-Geddes, John;
Shaw, Ruth G.;
Tiffin, Peter

Publication type:

Article

Heterosis Is Prevalent for Multiple Traits in Diverse Maize Germplasm.

Published in:

PLoS ONE, 2009, v. 4, n. 10, p. 1, doi. 10.1371/journal.pone.0007433

By:

Flint-Garcia, Sherry A.;
Buckler, Edward S.;
Tiffin, Peter;
Ersoz, Elhan;
Springer, Nathan M.

Publication type:

Article

Phylogenetic Signal Variation in the Genomes of Medicago (Fabaceae).

Published in:

Systematic Biology, 2013, v. 62, n. 3, p. 424, doi. 10.1093/sysbio/syt009

By:

YODER, JEREMY B.;
BRISKINE, ROMAN;
MUDGE, JOANN;
FARMER, ANDREW;
PAAPE, TIMOTHY;
STEELE, KELLY;
WEIBLEN, GEORGE D.;
BHARTI, ARVIND K.;
ZHOU, PENG;
MAY, GREGORY D.;
YOUNG, NEVIN D.;
TIFFIN, PETER

Publication type:

Article

Pleistocene Speciation in the Genus Populus (Salicaceae).

Published in:

Systematic Biology, 2012, v. 61, n. 3, p. 401, doi. 10.1093/sysbio/syr120

By:

Levsen, Nicholas D.;
Tiffin, Peter;
Olson, Matthew S.

Publication type:

Article

Pleiotropy facilitates local adaptation to distant optima in common ragweed (Ambrosia artemisiifolia).

Published in:

PLoS Genetics, 2020, v. 16, n. 3, p. 1, doi. 10.1371/journal.pgen.1008707

By:

Hämälä, Tuomas;
Gorton, Amanda J.;
Moeller, David A.;
Tiffin, Peter

Publication type:

Article

Local adaptation and range boundary formation in response to complex environmental gradients across the geographical range of Clarkia xantiana ssp . xantiana.

Published in:

Journal of Ecology, 2014, v. 102, n. 1, p. 95, doi. 10.1111/1365-2745.12188

By:

Gould, Billie;
Moeller, David A.;
Eckhart, Vincent M.;
Tiffin, Peter;
Fabio, Eric;
Geber, Monica A.;
Whitney, Kenneth

Publication type:

Article

Plant functional type classifications in tropical dry forests in Costa Rica: leaf habit versus taxonomic approaches.

Published in:

Functional Ecology, 2010, v. 24, n. 4, p. 927, doi. 10.1111/j.1365-2435.2010.01701.x

By:

Powers, Jennifer S.;
Tiffin, Peter

Publication type:

Article

Combining GWAS and population genomic analyses to characterize coevolution in a legume‐rhizobia symbiosis.

Published in:

Molecular Ecology, 2023, v. 32, n. 14, p. 3798, doi. 10.1111/mec.16602

By:

Epstein, Brendan;
Burghardt, Liana T.;
Heath, Katy D.;
Grillo, Michael A.;
Kostanecki, Adam;
Hämälä, Tuomas;
Young, Nevin D.;
Tiffin, Peter

Publication type:

Article

Discordant population structure among rhizobium divided genomes and their legume hosts.

Published in:

Molecular Ecology, 2023, v. 32, n. 10, p. 2646, doi. 10.1111/mec.16704

By:

Riley, Alex B.;
Grillo, Michael A.;
Epstein, Brendan;
Tiffin, Peter;
Heath, Katy D.

Publication type:

Article

Transcriptomic basis of genome by genome variation in a legume-rhizobia mutualism.

Published in:

Molecular Ecology, 2017, v. 26, n. 21, p. 6122, doi. 10.1111/mec.14285

By:

Burghardt, Liana T.;
Guhlin, Joseph;
Chun, Chan Lan;
Liu, Junqi;
Sadowsky, Michael J.;
Stupar, Robert M.;
Young, Nevin D.;
Tiffin, Peter

Publication type:

Article

Adaptation to climate through flowering phenology: a case study in Medicago truncatula.

Published in:

Molecular Ecology, 2016, v. 25, n. 14, p. 3397, doi. 10.1111/mec.13683

By:

Burgarella, Concetta;
Chantret, Nathalie;
Gay, Laurène;
Prosperi, Jean‐Marie;
Bonhomme, Maxime;
Tiffin, Peter;
Young, Nevin D.;
Ronfort, Joelle

Publication type:

Article

Relocation, high-latitude warming and host genetic identity shape the foliar fungal microbiome of poplars.

Published in:

Molecular Ecology, 2015, v. 24, n. 1, p. 235, doi. 10.1111/mec.13018

By:

Bálint, Miklós;
Bartha, László;
O'Hara, Robert B.;
Olson, Matthew S.;
Otte, Jürgen;
Pfenninger, Markus;
Robertson, Amanda L.;
Tiffin, Peter;
Schmitt, Imke

Publication type:

Article

Selection, genome-wide fitness effects and evolutionary rates in the model legume Medicago truncatula.

Published in:

Molecular Ecology, 2013, v. 22, n. 13, p. 3525, doi. 10.1111/mec.12329

By:

Paape, Timothy;
Bataillon, Thomas;
Zhou, Peng;
J. Y. Kono, Tom;
Briskine, Roman;
Young, Nevin D.;
Tiffin, Peter

Publication type:

Article

The adaptive potential of Populus balsamifera L. to phenology requirements in a warmer global climate.

Published in:

Molecular Ecology, 2013, v. 22, n. 5, p. 1214, doi. 10.1111/mec.12067

By:

Olson, Matthew S.;
Levsen, Nicholas;
Soolanayakanahally, Raju Y.;
Guy, Robert D.;
Schroeder, William R.;
Keller, Stephen R.;
Tiffin, Peter

Publication type:

Article

Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria.

Published in:

BMC Microbiology, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12866-024-03391-5

By:

Bhat, Aditi;
Sharma, Reena;
Desigan, Kumaran;
Lucas, M. Mercedes;
Mishra, Ankita;
Bowers, Robert M.;
Woyke, Tanja;
Epstein, Brendan;
Tiffin, Peter;
Pueyo, José J.;
Paape, Tim

Publication type:

Article

A combination of conserved and diverged responses underlies Theobroma cacao's defense response to Phytophthora palmivora.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-01831-2

By:

Winters, Noah P.;
Wafula, Eric K.;
Knollenberg, Benjamin J.;
Hämälä, Tuomas;
Timilsena, Prakash R.;
Perryman, Melanie;
Zhang, Dapeng;
Sheaffer, Lena L.;
Praul, Craig A.;
Ralph, Paula E.;
Prewitt, Sarah;
Leandro-Muñoz, Mariela E.;
Delgadillo-Duran, Diego A.;
Altman, Naomi S.;
Tiffin, Peter;
Maximova, Siela N.;
dePamphilis, Claude W.;
Marden, James H.;
Guiltinan, Mark J.

Publication type:

Article

Effects of Gene Action, Marker Density, and Timing of Selection on the Performance of Landscape Genomic Scans of Local Adaptation.

Published in:

Journal of Heredity, 2018, v. 109, n. 1, p. 16, doi. 10.1093/jhered/esx042

By:

Yoder, Jeremy B.;
Tiffin, Peter

Publication type:

Article

Biased Gene Conversion Constrains Adaptation in Arabidopsis thaliana.

Published in:

Genetics, 2020, v. 215, n. 3, p. 831, doi. 10.1534/genetics.120.303335

By:

Hämälä, Tuomas;
Tiffin, Peter

Publication type:

Article

Genomic Signature of Adaptation to Climate in Medicago truncatula.

Published in:

Genetics, 2014, v. 196, n. 4, p. 1263, doi. 10.1534/genetics.113.159319

By:

Yoder, Jeremy B.;
Stanton-Geddes, John;
Peng Zhou;
Briskine, Roman;
Young, Nevin D.;
Tiffin, Peter

Publication type:

Article

Local Selection Across a Latitudinal Gradient Shapes Nucleotide Diversity in Balsam Poplar, Populus balsamifera L.

Published in:

Genetics, 2011, v. 188, n. 4, p. 941, doi. 10.1534/genetics.111.128041

By:

Keller, Stephen R.;
Levsen, Nicholas;
Ingvarsson, Pär K.;
Olson, Matthew S.;
Tiffin, Peter

Publication type:

Article

Population Structure and Its Effects on Patterns of Nucleotide Polymorphism in Teosinte (Zea mays ssp. parviglumis).

Published in:

Genetics, 2007, v. 176, n. 3, p. 1799, doi. 10.1534/genetics.107.070631

By:

Moeller, David A.;
Tenaillon, Maud I.;
Tiffin, Peter

Publication type:

Article

Population Genetic Evidence for Rapid Changes in Intraspecific Diversity and Allelic Cycling of a Specialist Defense Gene in Zea.

Published in:

Genetics, 2004, v. 168, n. 1, p. 425, doi. 10.1534/genetics.103.023028

By:

Tiffin, Peter;
Hackert, Robert;
Gautt, Brandon S.

Publication type:

Article

Comparative Evolutionary Histories of Chitinase Genes in the Genus Zea and Family Poaceac.

Published in:

Genetics, 2004, v. 167, n. 3, p. 1331, doi. 10.1534/genetics.104.026856

By:

Tiffin, Peter

Publication type:

Article

The spatial scale of adaptation in a native annual plant and its implications for responses to climate change.

Published in:

Evolution, 2022, v. 76, n. 12, p. 2916, doi. 10.1111/evo.14583

By:

Gorton, Amanda J.;
Benning, John W.;
Tiffin, Peter;
Moeller, David A.

Publication type:

Article

Legacy of prior host and soil selection on rhizobial fitness in planta.

Published in:

Evolution, 2019, v. 73, n. 9, p. 2013, doi. 10.1111/evo.13807

By:

Burghardt, Liana T.;
Epstein, Brendan;
Tiffin, Peter

Publication type:

Article

STABILIZING MECHANISMS IN A LEGUME–RHIZOBIUM MUTUALISM.

Published in:

Evolution, 2009, v. 63, n. 3, p. 652, doi. 10.1111/j.1558-5646.2008.00582.x

By:

Heath, Katy D.;
Tiffin, Peter

Publication type:

Article

GEOGRAPHIC VARIATION IN ADAPTATION AT THE MOLECULAR LEVEL: A CASE STUDY OF PLANT IMMUNITY GENES.

Published in:

Evolution, 2008, v. 62, n. 12, p. 3069, doi. 10.1111/j.1558-5646.2008.00511.x

By:

Moeller, David A.;
Tiffin, Peter

Publication type:

Article

Localization of the gene for progressive bifocal chorioretinal atrophy (PBCRA) to chromosome 6q.

Published in:

Human Molecular Genetics, 1995, v. 4, n. 9, p. 1653

By:

Kelsell, Rosemary E.;
Godley, Bernard F.;
Evans, Kevin;
Tiffin, Peter A.C.;
Gregory, Cheryl Y.;
Plant, Catherine;
Moore, Anthony T.;
Bird, Alan C.;
Hunt, David M.

Publication type:

Article

Widely distributed variation in tolerance to Phytophthora palmivora in four genetic groups of cacao.

Published in:

Tree Genetics & Genomes, 2020, v. 16, n. 1, p. 1, doi. 10.1007/s11295-019-1396-8

By:

Fister, Andrew S.;
Leandro-Muñoz, Mariela E.;
Zhang, Dapeng;
Marden, James H.;
Tiffin, Peter;
dePamphilis, Claude;
Maximova, Siela;
Guiltinan, Mark J.

Publication type:

Article

Timing for success: expression phenotype and local adaptation related to latitude in the boreal forest tree, Populus balsamifera.

Published in:

Tree Genetics & Genomes, 2014, v. 10, n. 4, p. 911, doi. 10.1007/s11295-014-0731-3

By:

Wang, Li;
Tiffin, Peter;
Olson, Matthew

Publication type:

Article

Use of the PedsQL in childhood intermittent exotropia: estimates of feasibility, internal consistency reliability and parent-child agreement.

Published in:

Quality of Life Research, 2012, v. 21, n. 4, p. 727, doi. 10.1007/s11136-011-9975-7

By:

Buck, Deborah;
Clarke, Michael;
Powell, Christine;
Tiffin, Peter;
Drewett, Robert

Publication type:

Article

Sex‐biased gene expression in flowers, but not leaves, reveals secondary sexual dimorphism in Populus balsamifera.

Published in:

New Phytologist, 2019, v. 221, n. 1, p. 527, doi. 10.1111/nph.15421

By:

Sanderson, Brian J.;
Wang, Li;
Tiffin, Peter;
Wu, Zhiqiang;
Olson, Matthew S.

Publication type:

Article

High-density genome-wide association mapping implicates an F-box encoding gene in Medicago truncatula resistance to Aphanomyces euteiches.

Published in:

New Phytologist, 2014, v. 201, n. 4, p. 1328, doi. 10.1111/nph.12611

By:

Bonhomme, Maxime;
André, Olivier;
Badis, Yacine;
Ronfort, Joëlle;
Burgarella, Concetta;
Chantret, Nathalie;
Prosperi, Jean‐Marie;
Briskine, Roman;
Mudge, Joann;
Debéllé, Frédéric;
Navier, Hélène;
Miteul, Henri;
Hajri, Ahmed;
Baranger, Alain;
Tiffin, Peter;
Dumas, Bernard;
Pilet‐Nayel, Marie‐Laure;
Young, Nevin D.;
Jacquet, Christophe

Publication type:

Article

Indirect effects drive evolutionary responses to global change.

Published in:

New Phytologist, 2014, v. 201, n. 1, p. 335, doi. 10.1111/nph.12490

By:

Lau, Jennifer A.;
Shaw, Ruth G.;
Reich, Peter B.;
Tiffin, Peter

Publication type:

Article

Nucleotide diversity and linkage disequilibrium in balsam poplar ( Populus balsamifera).

Published in:

New Phytologist, 2010, v. 186, n. 2, p. 526, doi. 10.1111/j.1469-8137.2009.03174.x

By:

Olson, Matthew S.;
Robertson, Amanda L.;
Takebayashi, Naoki;
Silim, Salim;
Schroeder, William R.;
Tiffin, Peter

Publication type:

Article

Selective histories of poplar protease inhibitors: elevated polymorphism, purifying selection, and positive selection driving divergence of recent duplicates.

Published in:

New Phytologist, 2009, v. 183, n. 3, p. 740, doi. 10.1111/j.1469-8137.2009.02936.x

By:

Neiman, Maurine;
Olson, Matthew S.;
Tiffin, Peter

Publication type:

Article

Strong ecological but weak evolutionary effects of elevated CO2 on a recombinant inbred population of Arabidopsis thaliana.

Published in:

New Phytologist, 2007, v. 175, n. 2, p. 351, doi. 10.1111/j.1469-8137.2007.02108.x

By:

Lau, Jennifer A.;
Shaw, Ruth G.;
Reich, Peter B.;
Shaw, Frank H.;
Tiffin, Peter

Publication type:

Article

INSIGHTS FROM POPULATION GENETICS FOR RANGE LIMITS OF A WIDELY DISTRIBUTED NATIVE PLANT.

Published in:

American Journal of Botany, 2013, v. 100, n. 4, p. 744, doi. 10.3732/ajb.1200468

By:

Stanton‐Geddes, John;
Shaw, Ruth G.;
Tiffin, Peter

Publication type:

Article

CLIMATE-DRIVEN LOCAL ADAPTATION OF ECOPHYSIOLOGY AND PHENOLOGY IN BALSAM POPLAR, POPULUS BALSAMIFERA L. (SALICACEAE).

Published in:

American Journal of Botany, 2011, v. 98, n. 1, p. 99, doi. 10.3732/ajb.1000317

By:

KELLER, STEPHEN R.;
SOOLANAYAKANAHALLY, RAJU Y.;
GUY, ROBERT D.;
SILIM, SALIM N.;
OLSON, MATTHEW S.;
TIFFIN, PETER

Publication type:

Article

ODG: Omics database generator - a tool for generating, querying, and analyzing multi-omics comparative databases to facilitate biological understanding.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1777-7

By:

Guhlin, Joseph;
Silverstein, Kevin A. T.;
Peng Zhou;
Tiffin, Peter;
Young, Nevin D.

Publication type:

Article

Does adaptation to historical climate shape plant responses to future rainfall patterns? A rainfall manipulation experiment with common ragweed.

Published in:

Oecologia, 2019, v. 190, n. 4, p. 941, doi. 10.1007/s00442-019-04463-4

By:

Gorton, Amanda J.;
Tiffin, Peter;
Moeller, David A.

Publication type:

Article

Elevated carbon dioxide concentrations indirectly affect plant fitness by altering plant tolerance to herbivory.

Published in:

Oecologia, 2009, v. 161, n. 2, p. 401, doi. 10.1007/s00442-009-1384-z

By:

Lau, Jennifer A.;
Tiffin, Peter

Publication type:

Article

Transgenerational effects of global environmental change: long-term CO2 and nitrogen treatments influence offspring growth response to elevated CO2.

Published in:

Oecologia, 2008, v. 158, n. 1, p. 141, doi. 10.1007/s00442-008-1127-6

By:

Lau, Jennifer A.;
Peiffer, Jill;
Reich, Peter B.;
Tiffin, Peter

Publication type:

Article

Clinical and Molecular Characterization of Enhanced S-Cone Syndrome in Children.

Published in:

JAMA Ophthalmology, 2014, v. 132, n. 11, p. 1341, doi. 10.1001/jamaophthalmol.2014.2343

By:

Hull, Sarah;
Arno, Gavin;
Sergouniotis, Panagiotis I.;
Tiffin, Peter;
Borman, Arundhati Dev;
Chandra, Aman;
Robson, Anthony G.;
Holder, Graham E.;
Webster, Andrew R.;
Moore, Anthony T.

Publication type:

Article

Role of climate and competitors in limiting fitness across range edges of an annual plant.

Published in:

Ecology, 2012, v. 93, n. 7, p. 1604, doi. 10.1890/11-1701.1

By:

Stanton-Geddes, John;
Tiffin, Peter;
Shaw, Ruth G.

Publication type:

Article

Reduced pollinator service and elevated pollen limitation at the geographic range limit of an annual plant.

Published in:

Ecology, 2012, v. 93, n. 5, p. 1036, doi. 10.1890/11-1462.1

By:

Moeller, David A.;
Geber, Monica A.;
Eckhart, Vincent M.;
Tiffin, Peter

Publication type:

Article