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Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria.
- Published in:
- BMC Microbiology, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12866-024-03391-5
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- Article
A combination of conserved and diverged responses underlies Theobroma cacao's defense response to Phytophthora palmivora.
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- BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-01831-2
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- Article
Combining GWAS and population genomic analyses to characterize coevolution in a legume‐rhizobia symbiosis.
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- Molecular Ecology, 2023, v. 32, n. 14, p. 3798, doi. 10.1111/mec.16602
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- Article
Discordant population structure among rhizobium divided genomes and their legume hosts.
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- Molecular Ecology, 2023, v. 32, n. 10, p. 2646, doi. 10.1111/mec.16704
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- Article
The spatial scale of adaptation in a native annual plant and its implications for responses to climate change.
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- Evolution, 2022, v. 76, n. 12, p. 2916, doi. 10.1111/evo.14583
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- Article
Biased Gene Conversion Constrains Adaptation in Arabidopsis thaliana.
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- Genetics, 2020, v. 215, n. 3, p. 831, doi. 10.1534/genetics.120.303335
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- Article
Pleiotropy facilitates local adaptation to distant optima in common ragweed (Ambrosia artemisiifolia).
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- PLoS Genetics, 2020, v. 16, n. 3, p. 1, doi. 10.1371/journal.pgen.1008707
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- Article
Widely distributed variation in tolerance to Phytophthora palmivora in four genetic groups of cacao.
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- Tree Genetics & Genomes, 2020, v. 16, n. 1, p. 1, doi. 10.1007/s11295-019-1396-8
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- Article
Gene Expression Modularity Reveals Footprints of Polygenic Adaptation in Theobroma cacao.
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- Molecular Biology & Evolution, 2020, v. 37, n. 1, p. 110, doi. 10.1093/molbev/msz206
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- Article
A Select and Resequence Approach Reveals Strain-Specific Effects of Medicago Nodule-Specific PLAT-Domain Genes.
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- Plant Physiology, 2020, v. 182, n. 1, p. 463, doi. 10.1104/pp.19.00831
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- Article
Legacy of prior host and soil selection on rhizobial fitness in planta.
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- Evolution, 2019, v. 73, n. 9, p. 2013, doi. 10.1111/evo.13807
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- Article
Does adaptation to historical climate shape plant responses to future rainfall patterns? A rainfall manipulation experiment with common ragweed.
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- Oecologia, 2019, v. 190, n. 4, p. 941, doi. 10.1007/s00442-019-04463-4
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- Article
Species distribution models throughout the invasion history of Palmer amaranth predict regions at risk of future invasion and reveal challenges with modeling rapidly shifting geographic ranges.
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- Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-018-38054-9
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- Article
Sex‐biased gene expression in flowers, but not leaves, reveals secondary sexual dimorphism in Populus balsamifera.
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- New Phytologist, 2019, v. 221, n. 1, p. 527, doi. 10.1111/nph.15421
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Effects of Gene Action, Marker Density, and Timing of Selection on the Performance of Landscape Genomic Scans of Local Adaptation.
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- Journal of Heredity, 2018, v. 109, n. 1, p. 16, doi. 10.1093/jhered/esx042
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- Article
Transcriptomic basis of genome by genome variation in a legume-rhizobia mutualism.
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- Molecular Ecology, 2017, v. 26, n. 21, p. 6122, doi. 10.1111/mec.14285
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- Article
ODG: Omics database generator - a tool for generating, querying, and analyzing multi-omics comparative databases to facilitate biological understanding.
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- BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1777-7
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- Article
Strategies for optimizing BioNano and Dovetail explored through a second reference quality assembly for the legume model, Medicago truncatula.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3971-4
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- Article
Hybrid assembly with long and short reads improves discovery of gene family expansions.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3927-8
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- Article
Living in the city: urban environments shape the evolution of a native annual plant.
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- Global Change Biology, 2017, v. 23, n. 5, p. 2082, doi. 10.1111/gcb.13528
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Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3654-1
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- Article
Validating Genome-Wide Association Candidates Controlling Quantitative Variation in Nodulation.
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- Plant Physiology, 2017, v. 173, n. 2, p. 921, doi. 10.1104/pp.16.01923
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- Article
The Role of Deleterious Substitutions in Crop Genomes.
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- Molecular Biology & Evolution, 2016, v. 33, n. 9, p. 2307, doi. 10.1093/molbev/msw102
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Adaptation to climate through flowering phenology: a case study in Medicago truncatula.
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- Molecular Ecology, 2016, v. 25, n. 14, p. 3397, doi. 10.1111/mec.13683
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- Article
Surrendering control, or nothing to lose: Parents’ preferences about participation in a randomised trial of childhood strabismus surgery.
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- Clinical Trials, 2015, v. 12, n. 4, p. 384, doi. 10.1177/1740774515577956
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- Article
Relocation, high-latitude warming and host genetic identity shape the foliar fungal microbiome of poplars.
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- Molecular Ecology, 2015, v. 24, n. 1, p. 235, doi. 10.1111/mec.13018
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- Article
Clinical and Molecular Characterization of Enhanced S-Cone Syndrome in Children.
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- JAMA Ophthalmology, 2014, v. 132, n. 11, p. 1341, doi. 10.1001/jamaophthalmol.2014.2343
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- Article
Timing for success: expression phenotype and local adaptation related to latitude in the boreal forest tree, Populus balsamifera.
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- Tree Genetics & Genomes, 2014, v. 10, n. 4, p. 911, doi. 10.1007/s11295-014-0731-3
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- Article
Selection on Horizontally Transferred and Duplicated Genes in Sinorhizobium (Ensifer), the Root-Nodule Symbionts of Medicago.
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- Genome Biology & Evolution, 2014, v. 6, n. 5, p. 1199, doi. 10.1093/gbe/evu090
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- Article
Genomic Signature of Adaptation to Climate in Medicago truncatula.
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- Genetics, 2014, v. 196, n. 4, p. 1263, doi. 10.1534/genetics.113.159319
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- Article
High-density genome-wide association mapping implicates an F-box encoding gene in Medicago truncatula resistance to Aphanomyces euteiches.
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- New Phytologist, 2014, v. 201, n. 4, p. 1328, doi. 10.1111/nph.12611
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- Article
Local adaptation and range boundary formation in response to complex environmental gradients across the geographical range of Clarkia xantiana ssp . xantiana.
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- Journal of Ecology, 2014, v. 102, n. 1, p. 95, doi. 10.1111/1365-2745.12188
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- Article
Indirect effects drive evolutionary responses to global change.
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- New Phytologist, 2014, v. 201, n. 1, p. 335, doi. 10.1111/nph.12490
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- Article
Estimating heritability using genomic data.
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- Methods in Ecology & Evolution, 2013, v. 4, n. 12, p. 1151, doi. 10.1111/2041-210X.12129
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Epigenetic and Genetic Influences on DNA Methylation Variation in Maize Populations.
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- Plant Cell, 2013, v. 25, n. 8, p. 2783, doi. 10.1105/tpc.113.114793
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Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies.
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- Genome Biology, 2013, v. 14, n. 2, p. 1, doi. 10.1186/gb-2013-14-2-r17
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- Article
Selection, genome-wide fitness effects and evolutionary rates in the model legume Medicago truncatula.
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- Molecular Ecology, 2013, v. 22, n. 13, p. 3525, doi. 10.1111/mec.12329
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- Article
Candidate Genes and Genetic Architecture of Symbiotic and Agronomic Traits Revealed by Whole-Genome, Sequence-Based Association Genetics in <i>Medicago truncatula</i>
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- PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0065688
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- Article
Phylogenetic Signal Variation in the Genomes of Medicago (Fabaceae).
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- Systematic Biology, 2013, v. 62, n. 3, p. 424, doi. 10.1093/sysbio/syt009
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- Article
INSIGHTS FROM POPULATION GENETICS FOR RANGE LIMITS OF A WIDELY DISTRIBUTED NATIVE PLANT.
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- American Journal of Botany, 2013, v. 100, n. 4, p. 744, doi. 10.3732/ajb.1200468
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- Article
The adaptive potential of Populus balsamifera L. to phenology requirements in a warmer global climate.
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- Molecular Ecology, 2013, v. 22, n. 5, p. 1214, doi. 10.1111/mec.12067
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- Article
Host Genotype Shapes the Foliar Fungal Microbiome of Balsam Poplar (Populus balsamifera).
- Published in:
- PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0053987
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- Article
Local Adaptation in the Flowering-Time Gene Network of Balsam Poplar, Populus balsamifera L.
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- Molecular Biology & Evolution, 2012, v. 29, n. 10, p. 3143, doi. 10.1093/molbev/mss121
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- Article
Fine-Scale Population Recombination Rates, Hotspots, and Correlates of Recombination in the Medicago truncatula Genome.
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- Genome Biology & Evolution, 2012, v. 4, n. 9, p. 726, doi. 10.1093/gbe/evs046
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- Article
Population Genomics of the Facultatively Mutualistic Bacteria Sinorhizobium meliloti and S. medicae.
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- PLoS Genetics, 2012, v. 8, n. 8, p. 1, doi. 10.1371/journal.pgen.1002868
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- Article
Role of climate and competitors in limiting fitness across range edges of an annual plant.
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- Ecology, 2012, v. 93, n. 7, p. 1604, doi. 10.1890/11-1701.1
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- Article
Comparative population genomics of maize domestication and improvement.
- Published in:
- Nature Genetics, 2012, v. 44, n. 7, p. 808, doi. 10.1038/ng.2309
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- Article
Reduced pollinator service and elevated pollen limitation at the geographic range limit of an annual plant.
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- Ecology, 2012, v. 93, n. 5, p. 1036, doi. 10.1890/11-1462.1
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- Article
Interactions between Soil Habitat and Geographic Range Location Affect Plant Fitness.
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- PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0036015
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- Article
Use of the PedsQL in childhood intermittent exotropia: estimates of feasibility, internal consistency reliability and parent-child agreement.
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- Quality of Life Research, 2012, v. 21, n. 4, p. 727, doi. 10.1007/s11136-011-9975-7
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- Article