Works matching AU Thurman, Robert E

Results: 17

Nonfucosylation of an anti-TIGIT antibody enhances FcγR engagement, driving innate immune activation and antitumor activity.

Published in:

Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1280986

By:

Smith, Alyson J.;
Thurman, Robert E.;
Weiping Zeng;
Grogan, Bryan;
Lucas, Sasha;
Gutierrez, Guadalupe;
Heiser, Ryan A.;
Wo, Serena W.;
Blackmarr, Amber;
Peterson, Scott;
Gardai, Shyra J.

Publication type:

Article

Chromatin accessibility pre-determines glucocorticoid receptor binding patterns.

Published in:

Nature Genetics, 2011, v. 43, n. 3, p. 264, doi. 10.1038/ng.759

By:

John, Sam;
Sabo, Peter J.;
Thurman, Robert E.;
Myong-Hee Sung;
Biddie, Simon C.;
Johnson, Thomas A.;
Hager, Gordon L.;
Stamatoyannopoulos, John A.

Publication type:

Article

Human mutation rate associated with DNA replication timing.

Published in:

Nature Genetics, 2009, v. 41, n. 4, p. 393, doi. 10.1038/ng.363

By:

Stamatoyannopoulos, John A.;
Adzhubei, Ivan;
Thurman, Robert E.;
Kryukov, Gregory V.;
Mirkin, Sergei M.;
Sunyaev, Shamil R.

Publication type:

Article

Unsupervised segmentation of continuous genomic data.

Published in:

Bioinformatics, 2007, v. 23, n. 11, p. 1424, doi. 10.1093/bioinformatics/btm096

By:

Nathan Day;
Andrew Hemmaplardh;
Robert E. Thurman;
John A. Stamatoyannopoulos;
William S. Noble

Publication type:

Article

Mapping and Dynamics of Regulatory DNA in Maturing Arabidopsis thaliana Siliques.

Published in:

Frontiers in Plant Science, 2019, v. 10, p. 1, doi. 10.3389/fpls.2019.01434

By:

Sullivan, Alessandra M.;
Arsovski, Andrej A.;
Thompson, Agnieszka;
Sandstrom, Richard;
Thurman, Robert E.;
Neph, Shane;
Johnson, Audra K.;
Sullivan, Shawn T.;
Sabo, Peter J.;
Neri III, Fidencio V.;
Weaver, Molly;
Diegel, Morgan;
Nemhauser, Jennifer L.;
Stamatoyannopoulos, John A.;
Bubb, Kerry L.;
Queitsch, Christine

Publication type:

Article

BEDOPS: high-performance genomic feature operations.

Published in:

Bioinformatics, 2012, v. 28, n. 14, p. 1919, doi. 10.1093/bioinformatics/bts277

By:

Neph, Shane;
Kuehn, M. Scott;
Reynolds, Alex P.;
Haugen, Eric;
Thurman, Robert E.;
Johnson, Audra K.;
Rynes, Eric;
Maurano, Matthew T.;
Vierstra, Jeff;
Thomas, Sean;
Sandstrom, Richard;
Humbert, Richard;
Stamatoyannopoulos, John A.

Publication type:

Article

Predicting Human Nucleosome Occupancy from Primary Sequence.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000134

By:

Gupta, Shobhit;
Dennis, Jonathan;
Thurman, Robert E.;
Kingston, Robert;
Stamatoyannopoulos, John A.;
Noble, William Stafford

Publication type:

Article

An encyclopedia of mouse DNA elements (Mouse ENCODE).

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-418

By:

Stamatoyannopoulos, John A;
Snyder, Michael;
Hardison, Ross;
Ren, Bing;
Gingeras, Thomas;
Gilbert, David M;
Groudine, Mark;
Bender, Michael;
Kaul, Rajinder;
Canfield, Theresa;
Giste, Erica;
Johnson, Audra;
Zhang, Mia;
Balasundaram, Gayathri;
Byron, Rachel;
Roach, Vaughan;
Sabo, Peter J;
Sandstrom, Richard;
Stehling, A Sandra;
Thurman, Robert E

Publication type:

Article

An encyclopedia of mouse DNA elements (Mouse ENCODE).

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-418

By:

Stamatoyannopoulos, John A.;
Snyder, Michael;
Hardison, Ross;
Ren, Bing;
Gingeras, Thomas;
Gilbert, David M.;
Groudine, Mark;
Bender, Michael;
Kaul, Rajinder;
Canfield, Theresa;
Giste, Erica;
Johnson, Audra;
Mia Zhang;
Balasundaram, Gayathri;
Byron, Rachel;
Roach, Vaughan;
Sabo, Peter J.;
Sandstrom, Richard;
Sandra Stehling, A.;
Thurman, Robert E.

Publication type:

Article

Dynamic reprogramming of chromatin accessibility during Drosophila embryo development.

Published in:

Genome Biology, 2011, v. 12, n. 5, p. 1, doi. 10.1186/gb-2011-12-5-r43

By:

Thomas, Sean;
Xiao-Yong Li;
Sabo, Peter J.;
Sandstrom, Richard;
Thurman, Robert E.;
Canfield, Theresa K.;
Giste, Erika;
Fisher, William;
Hammonds, Ann;
Celniker, Susan E.;
Biggin, Mark D.;
Stamatoyannopoulos, John A.

Publication type:

Article

DNA methylation status predicts cell type-specific enhancer activity.

Published in:

EMBO Journal, 2011, v. 30, n. 15, p. 3028, doi. 10.1038/emboj.2011.210

By:

Wiench, Malgorzata;
John, Sam;
Baek, Songjoon;
Johnson, Thomas A;
Sung, Myong-Hee;
Escobar, Thelma;
Simmons, Catherine A;
Pearce, Kenneth H;
Biddie, Simon C;
Sabo, Pete J;
Thurman, Robert E;
Stamatoyannopoulos, John A;
Hager, Gordon L

Publication type:

Article

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

Published in:

Nature Methods, 2009, v. 6, n. 4, p. 283, doi. 10.1038/nmeth.1313

By:

Hesselberth, Jay R.;
Xiaoyu Chen;
Zhihong Zhang;
Sabo, Peter J.;
Sandstrom, Richard;
Reynolds, Alex P.;
Thurman, Robert E.;
Neph, Shane;
Kuehn, Michael S.;
Noble, William S.;
Fields, Stanley;
Stamatoyannopoulos, John A.

Publication type:

Article

The accessible chromatin landscape of the human genome.

Published in:

Nature, 2012, v. 489, n. 7414, p. 75, doi. 10.1038/nature11232

By:

Thurman, Robert E.;
Rynes, Eric;
Humbert, Richard;
Vierstra, Jeff;
Maurano, Matthew T.;
Haugen, Eric;
Sheffield, Nathan C.;
Stergachis, Andrew B.;
Wang, Hao;
Vernot, Benjamin;
Garg, Kavita;
John, Sam;
Sandstrom, Richard;
Bates, Daniel;
Boatman, Lisa;
Canfield, Theresa K.;
Diegel, Morgan;
Dunn, Douglas;
Ebersol, Abigail K.;
Frum, Tristan

Publication type:

Article

An expansive human regulatory lexicon encoded in transcription factor footprints.

Published in:

Nature, 2012, v. 489, n. 7414, p. 83, doi. 10.1038/nature11212

By:

Neph, Shane;
Vierstra, Jeff;
Stergachis, Andrew B.;
Reynolds, Alex P.;
Haugen, Eric;
Vernot, Benjamin;
Thurman, Robert E.;
John, Sam;
Sandstrom, Richard;
Johnson, Audra K.;
Maurano, Matthew T.;
Humbert, Richard;
Rynes, Eric;
Wang, Hao;
Vong, Shinny;
Lee, Kristen;
Bates, Daniel;
Diegel, Morgan;
Roach, Vaughn;
Dunn, Douglas

Publication type:

Article

Conservation of trans-acting circuitry during mammalian regulatory evolution.

Published in:

Nature, 2014, v. 515, n. 7527, p. 365, doi. 10.1038/nature13972

By:

Stergachis, Andrew B.;
Neph, Shane;
Sandstrom, Richard;
Haugen, Eric;
Reynolds, Alex P.;
Canfield, Theresa;
Stelhing-Sun, Sandra;
Lee, Kristen;
Thurman, Robert E.;
Vong, Shinny;
Bates, Daniel;
Neri, Fidencio;
Diegel, Morgan;
Giste, Erika;
Dunn, Douglas;
Vierstra, Jeff;
Johnson, Audra K.;
Sabo, Peter J.;
Zhang, Miaohua;
Byron, Rachel

Publication type:

Article

Topologically associating domains are stable units of replication-timing regulation.

Published in:

Nature, 2014, v. 515, n. 7527, p. 402, doi. 10.1038/nature13986

By:

Pope, Benjamin D.;
Dileep, Vishnu;
Vera, Daniel L.;
Dennis, Jonathan H.;
Gilbert, David M.;
Gülsoy, Günhan;
Kahveci, Tamer;
Ren, Bing;
Ryba, Tyrone;
Yue, Feng;
Wu, Weisheng;
Hardison, Ross C.;
Denas, Olgert;
Taylor, James;
Wang, Yanli;
Hansen, R. Scott;
Canfield, Theresa K.;
Thurman, Robert E.;
Stamatoyannopoulos, John A.;
Cheng, Yong

Publication type:

Article

Reduced local mutation density in regulatory DNA of cancer genomes is linked to DNA repair.

Published in:

Nature Biotechnology, 2014, v. 32, n. 1, p. 71, doi. 10.1038/nbt.2778

By:

Polak, Paz;
Lawrence, Michael S;
Haugen, Eric;
Stoletzki, Nina;
Stojanov, Petar;
Thurman, Robert E;
Garraway, Levi A;
Mirkin, Sergei;
Getz, Gad;
Stamatoyannopoulos, John A;
Sunyaev, Shamil R

Publication type:

Article