Works by Thomson, Nicholas R.

Results: 103

High quality transcriptome profiling confirms the transcriptional landscape of Treponema pallidum subsp. pallidum.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-06583-9

By:

Grillová, Linda;
Carrami, Eli M.;
Roberts-Sengier, William;
Thomson, Nicholas R.

Publication type:

Article

Genetic diversity, determinants, and dissemination of Burkholderia pseudomallei lineages implicated in melioidosis in Northeast Thailand.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-50067-9

By:

Seng, Rathanin;
Chomkatekaew, Chalita;
Tandhavanant, Sarunporn;
Saiprom, Natnaree;
Phunpang, Rungnapa;
Thaipadungpanit, Janjira;
Batty, Elizabeth M.;
Day, Nicholas P. J.;
Chantratita, Wasun;
Eoin West, T.;
Thomson, Nicholas R.;
Parkhill, Julian;
Chewapreecha, Claire;
Chantratita, Narisara

Publication type:

Article

Combining machine learning with high-content imaging to infer ciprofloxacin susceptibility in isolates of Salmonella Typhimurium.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49433-4

By:

Tran, Tuan-Anh;
Sridhar, Sushmita;
Reece, Stephen T.;
Lunguya, Octavie;
Jacobs, Jan;
Van Puyvelde, Sandra;
Marks, Florian;
Dougan, Gordon;
Thomson, Nicholas R.;
Nguyen, Binh T.;
Bao, Pham The;
Baker, Stephen

Publication type:

Article

Contrasting patterns of longitudinal population dynamics and antimicrobial resistance mechanisms in two priority bacterial pathogens over 7 years in a single center.

Published in:

Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1785-1

By:

Ellington, Matthew J.;
Heinz, Eva;
Wailan, Alexander M.;
Dorman, Matthew J.;
de Goffau, Marcus;
Cain, Amy K.;
Henson, Sonal P.;
Gleadall, Nicholas;
Boinett, Christine J.;
Dougan, Gordon;
Brown, Nicholas M.;
Woodford, Neil;
Parkhill, Julian;
Török, M. Estée;
Peacock, Sharon J.;
Thomson, Nicholas R.

Publication type:

Article

The regulon of Brucella abortus two-component system BvrR/BvrS reveals the coordination of metabolic pathways required for intracellular life.

Published in:

PLoS ONE, 2022, v. 17, n. 9, p. 1, doi. 10.1371/journal.pone.0274397

By:

Rivas-Solano, Olga;
Van der Henst, Mathilde;
Castillo-Zeledón, Amanda;
Suárez-Esquivel, Marcela;
Muñoz-Vargas, Lohendy;
Capitan-Barrios, Zeuz;
Thomson, Nicholas R.;
Chaves-Olarte, Esteban;
Moreno, Edgardo;
De Bolle, Xavier;
Guzmán-Verri, Caterina

Publication type:

Article

Vive la différence.

Published in:

Nature Reviews Microbiology, 2008, v. 6, n. 7, p. 502, doi. 10.1038/nrmicro1929

By:

Thomson, Nicholas R.

Publication type:

Article

Genome watch: GI genomes.

Published in:

Nature Reviews Microbiology, 2005, v. 3, n. 5, p. 368, doi. 10.1038/nrmicro1153

By:

Cerdeño-Tárraga, Ana;
Claesson, Marcus J.;
Sebaihia, Mohammed;
Thomson, Nicholas R.

Publication type:

Article

Genome watch: Livelihood hazards.

Published in:

Nature Reviews Microbiology, 2005, v. 3, n. 4, p. 278, doi. 10.1038/nrmicro1132

By:

Sebaihia, Mohammed;
Thomson, Nicholas R.;
Crossman, Lisa;
Parkhill, Julian

Publication type:

Article

Genome watch: Chalk and cheese.

Published in:

Nature Reviews Microbiology, 2004, v. 2, n. 7, p. 528, doi. 10.1038/nrmicro932

By:

Crossman, Lisa;
Cerdeño-Tárraga, Ana;
Thomson, Nicholas R.

Publication type:

Article

Evolutionary histories and antimicrobial resistance in Shigella flexneri and Shigella sonnei in Southeast Asia.

Published in:

Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-01905-9

By:

Chung The, Hao;
Bodhidatta, Ladaporn;
Pham, Duy Thanh;
Mason, Carl J.;
Ha Thanh, Tuyen;
Voong Vinh, Phat;
Turner, Paul;
Hem, Sopheak;
Dance, David A. B.;
Newton, Paul N.;
Phetsouvanh, Rattanaphone;
Davong, Viengmon;
Thwaites, Guy E.;
Thomson, Nicholas R.;
Baker, Stephen;
Rabaa, Maia A.

Publication type:

Article

Characterisation of Bacteriophage-Encoded Depolymerases Selective for Key Klebsiella pneumoniae Capsular Exopolysaccharides.

Published in:

Frontiers in Cellular & Infection Microbiology, 2021, v. 11, p. 1, doi. 10.3389/fcimb.2021.686090

By:

Blundell-Hunter, George;
Enright, Mark C.;
Negus, David;
Dorman, Matthew J.;
Beecham, Gemma E.;
Pickard, Derek J.;
Wintachai, Phitchayapak;
Voravuthikunchai, Supayang P.;
Thomson, Nicholas R.;
Taylor, Peter W.

Publication type:

Article

Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coli.

Published in:

Molecular Microbiology, 2006, v. 61, n. 5, p. 1267, doi. 10.1111/j.1365-2958.2006.05281.x

By:

Dudley, Edward G.;
Thomson, Nicholas R.;
Parkhill, Julian;
Morin, Nicholas P.;
Nataro, James P.

Publication type:

Article

Carbapenem antibiotic biosynthesis inErwinia carotovorais regulated by physiological and genetic factors modulating the quorum sensing-dependent control pathway.

Published in:

Molecular Microbiology, 2005, v. 55, n. 2, p. 526, doi. 10.1111/j.1365-2958.2004.04397.x

By:

McGowan, Simon J.;
Barnard, Anne M. L.;
Bosgelmez, Gulgun;
Sebaihia, Mohammed;
Simpson, Natalie J. L.;
Thomson, Nicholas R.;
Todd, Daniel E.;
Welch, Martin;
Whitehead, Neil A.;
Salmond, George P. C.

Publication type:

Article

Complete sequence and molecular epidemiology of IncK epidemic plasmid encoding blaCTX-M-14.

Published in:

2011

By:

Cottell JL;
Webber MA;
Coldham NG;
Taylor DL;
Cerdeño-Tárraga AM;
Hauser H;
Thomson NR;
Woodward MJ;
Piddock LJ;
Cottell, Jennifer L;
Webber, Mark A;
Coldham, Nick G;
Taylor, Dafydd L;
Cerdeño-Tárraga, Anna M;
Hauser, Heidi;
Thomson, Nicholas R;
Woodward, Martin J;
Piddock, Laura J V

Publication type:

journal article

Complete Sequence and Molecular Epidemiology of IncK Epidemic Plasmid Encoding blaCTX-M-14.

Published in:

Emerging Infectious Diseases, 2011, v. 17, n. 4, p. 645, doi. 10.3201/eid1704.101009

By:

Cottell, Jennifer L.;
Webber, Mark A.;
Coldham, Nick G.;
Taylor, Dafydd L.;
Cerdeño-Tarraga, Anna M.;
Hauser, Heidi;
Thomson, Nicholas R.;
Woodward, Martin J.;
Piddock, Laura J. V.

Publication type:

Article

A simple method for directional transcriptome sequencing using Illumina technology.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 22, p. e148, doi. 10.1093/nar/gkp811

By:

Croucher, Nicholas J.;
Fookes, Maria C.;
Perkins, Timothy T.;
Turner, Daniel J.;
Marguerat, Samuel B.;
Keane, Thomas;
Quail, Michael A.;
He, Miao;
Assefa, Sammey;
Bähler, Jürg;
Kingsley, Robert A.;
Parkhill, Julian;
Bentley, Stephen D.;
Dougan, Gordon;
Thomson, Nicholas R.

Publication type:

Article

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 1, doi. 10.1093/nar/gkj405

By:

Riley, Monica;
Abe, Takashi;
Arnaud, Martha B.;
Berlyn, Mary K.B.;
Blattner, Frederick R.;
Chaudhuri, Roy R.;
Glasner, Jeremy D.;
Horiuchi, Takashi;
Keseler, Ingrid M.;
Kosuge, Takehide;
Mori, Hirotada;
Perna, Nicole T.;
Plunkett, Guy;
Rudd, Kenneth E.;
Serres, Margrethe H.;
Thomas, Gavin H.;
Thomson, Nicholas R.;
Wishart, David;
Wanner, Barry L.

Publication type:

Article

Genomic dissection of Klebsiella pneumoniae infections in hospital patients reveals insights into an opportunistic pathogen.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30717-6

By:

Gorrie, Claire L.;
Mirčeta, Mirjana;
Wick, Ryan R.;
Judd, Louise M.;
Lam, Margaret M. C.;
Gomi, Ryota;
Abbott, Iain J.;
Thomson, Nicholas R.;
Strugnell, Richard A.;
Pratt, Nigel F.;
Garlick, Jill S.;
Watson, Kerrie M.;
Hunter, Peter C.;
Pilcher, David V.;
McGloughlin, Steve A.;
Spelman, Denis W.;
Wyres, Kelly L.;
Jenney, Adam W. J.;
Holt, Kathryn E.

Publication type:

Article

Population structure analysis and laboratory monitoring of Shigella by core-genome multilocus sequence typing.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28121-1

By:

Yassine, Iman;
Lefèvre, Sophie;
Hansen, Elisabeth E.;
Ruckly, Corinne;
Carle, Isabelle;
Lejay-Collin, Monique;
Fabre, Laëtitia;
Rafei, Rayane;
Clermont, Dominique;
de la Gandara, Maria Pardos;
Dabboussi, Fouad;
Thomson, Nicholas R.;
Weill, François-Xavier

Publication type:

Article

Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22700-4

By:

Hawkey, Jane;
Paranagama, Kalani;
Baker, Kate S.;
Bengtsson, Rebecca J.;
Weill, François-Xavier;
Thomson, Nicholas R.;
Baker, Stephen;
Cerdeira, Louise;
Iqbal, Zamin;
Hunt, Martin;
Ingle, Danielle J.;
Dallman, Timothy J.;
Jenkins, Claire;
Williamson, Deborah A.;
Holt, Kathryn E.

Publication type:

Article

Isolation and Characterisation of Bacteriophage Selective for Key Acinetobacter baumannii Capsule Chemotypes.

Published in:

Pharmaceuticals (14248247), 2022, v. 15, n. 4, p. N.PAG, doi. 10.3390/ph15040443

By:

Soontarach, Rosesathorn;
Srimanote, Potjanee;
Enright, Mark C.;
Blundell-Hunter, George;
Dorman, Matthew J.;
Thomson, Nicholas R.;
Taylor, Peter W.;
Voravuthikunchai, Supayang P.

Publication type:

Article

The Population Structure of Vibrio cholerae from the Chandigarh Region of Northern India.

Published in:

PLoS Neglected Tropical Diseases, 2014, v. 8, n. 7, p. 1, doi. 10.1371/journal.pntd.0002981

By:

Abd El Ghany, Moataz;
Chander, Jagadish;
Mutreja, Ankur;
Rashid, Mamoon;
Hill-Cawthorne, Grant A.;
Ali, Shahjahan;
Naeem, Raeece;
Thomson, Nicholas R.;
Dougan, Gordon;
Pain, Arnab

Publication type:

Article

The Population Structure of Vibrio cholerae from the Chandigarh Region of Northern India.

Published in:

PLoS Neglected Tropical Diseases, 2014, v. 8, n. 7, p. 1, doi. 10.1371/journal.pntd.0002981

By:

Abd El Ghany, Moataz;
Chander, Jagadish;
Mutreja, Ankur;
Rashid, Mamoon;
Hill-Cawthorne, Grant A.;
Ali, Shahjahan;
Naeem, Raeece;
Thomson, Nicholas R.;
Dougan, Gordon;
Pain, Arnab

Publication type:

Article

Genomic Characterisation of Invasive Non-Typhoidal Salmonella enterica Subspecies enterica Serovar Bovismorbificans Isolates from Malawi.

Published in:

PLoS Neglected Tropical Diseases, 2013, v. 7, n. 11, p. 1, doi. 10.1371/journal.pntd.0002557

By:

Bronowski, Christina;
Fookes, Maria C.;
Gilderthorp, Ruth;
Ashelford, Kevin E.;
Harris, Simon R.;
Phiri, Amos;
Hall, Neil;
Gordon, Melita A.;
Wain, John;
Hart, Charles A.;
Wigley, Paul;
Thomson, Nicholas R.;
Winstanley, Craig

Publication type:

Article

Genomic Characterisation of Invasive Non-Typhoidal Salmonella enterica Subspecies enterica Serovar Bovismorbificans Isolates from Malawi.

Published in:

PLoS Neglected Tropical Diseases, 2013, v. 7, n. 11, p. 1, doi. 10.1371/journal.pntd.0002557

By:

Bronowski, Christina;
Fookes, Maria C.;
Gilderthorp, Ruth;
Ashelford, Kevin E.;
Harris, Simon R.;
Phiri, Amos;
Hall, Neil;
Gordon, Melita A.;
Wain, John;
Hart, Charles A.;
Wigley, Paul;
Thomson, Nicholas R.;
Winstanley, Craig

Publication type:

Article

Spatial and Genomic Data to Characterize Endemic Typhoid Transmission.

Published in:

Clinical Infectious Diseases, 2022, v. 74, n. 11, p. 1993, doi. 10.1093/cid/ciab745

By:

Gauld, Jillian S;
Olgemoeller, Franziska;
Heinz, Eva;
Nkhata, Rose;
Bilima, Sithembile;
Wailan, Alexander M;
Kennedy, Neil;
Mallewa, Jane;
Gordon, Melita A;
Read, Jonathan M;
Heyderman, Robert S;
Thomson, Nicholas R;
Diggle, Peter J;
Feasey, Nicholas A

Publication type:

Article

Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe.

Published in:

Nature Genetics, 2012, v. 44, n. 9, p. 1056, doi. 10.1038/ng.2369

By:

Holt, Kathryn E;
Baker, Stephen;
Weill, François-Xavier;
Holmes, Edward C;
Kitchen, Andrew;
Yu, Jun;
Sangal, Vartul;
Brown, Derek J;
Coia, John E;
Kim, Dong Wook;
Choi, Seon Young;
Kim, Su Hee;
da Silveira, Wanderley D;
Pickard, Derek J;
Farrar, Jeremy J;
Parkhill, Julian;
Dougan, Gordon;
Thomson, Nicholas R

Publication type:

Article

Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity.

Published in:

Nature Genetics, 2010, v. 42, n. 12, p. 1140, doi. 10.1038/ng.705

By:

Morelli, Giovanna;
Song, Yajun;
Mazzoni, Camila J.;
Eppinger, Mark;
Roumagnac, Philippe;
Wagner, David M.;
Feldkamp, Mirjam;
Kusecek, Barica;
Vogler, Amy J.;
Li, Yanjun;
Yujun Cui;
Thomson, Nicholas R.;
Jombart, Thibaut;
Leblois, Raphael;
Lichtner, Peter;
Rahalison, Lila;
Petersen, Jeannine M.;
Balloux, Francois;
Keim, Paul;
Wirth, Thierry

Publication type:

Article

The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome.

Published in:

Nature Genetics, 2006, v. 38, n. 7, p. 779, doi. 10.1038/ng1830

By:

Sebaihia, Mohammed;
Wren, Brendan W.;
Mullany, Peter;
Fairweather, Neil F.;
Minton, Nigel;
Stabler, Richard;
Thomson, Nicholas R.;
Roberts, Adam P.;
Cerdeño-Tárraga, Ana M.;
Hongmei Wang;
Holden, Matthew T. G.;
Wright, Anne;
Churcher, Carol;
Quail, Michael A.;
Baker, Stephen;
Bason, Nathalie;
Brooks, Karen;
Chillingworth, Tracey;
Cronin, Ann;
Davis, Paul

Publication type:

Article

Horizontally Acquired Glycosyltransferase Operons Drive Salmonellae Lipopolysaccharide Diversity.

Published in:

PLoS Genetics, 2013, v. 9, n. 6, p. 1, doi. 10.1371/journal.pgen.1003568

By:

Davies, Mark R.;
Broadbent, Sarah E.;
Harris, Simon R.;
Thomson, Nicholas R.;
van der Woude, Marjan W.

Publication type:

Article

A Strand-Specific RNA-Seq Analysis of the Transcriptome of the Typhoid Bacillus Salmonella Typhi.

Published in:

PLoS Genetics, 2009, v. 5, n. 7, p. 1, doi. 10.1371/journal.pgen.1000569

By:

Perkins, Timothy T.;
Kingsley, Robert A.;
Fookes, Maria C.;
Gardner, Paul P.;
James, Keith D.;
Lu Yu;
Assefa, Samuel A.;
Miao He;
Croucher, Nicholas J.;
Pickard, Derek J.;
Maskell, Duncan J.;
Parkhill, Julian;
Choudhary, Jyoti;
Thomson, Nicholas R.;
Dougan, Gordon

Publication type:

Article

The Complete Genome Sequence and Comparative Genome Analysis of the High Pathogenicity Yersinia enterocolitica Strain 8081.

Published in:

PLoS Genetics, 2006, v. 3, n. 6, p. 2039, doi. 10.1371/journal.pgen.0020206

By:

Thomson, Nicholas R.;
Howard, Sarah;
Wren, Brendan W.;
Holden, Matthew T. G.;
Crossman, Lisa;
Challis, Gregory L.;
Churcher, Carol;
Mungall, Karen;
Brooks, Karen;
Chillingworth, Tracey;
Feltwell, Theresa;
Abdellah, Zahra;
Hauser, Heidi;
Jagels, Kay;
Maddison, Mark;
Moule, Sharon;
Sanders, Mandy;
Whitehead, Sally;
Quail, Michael A.;
Dougan, Gordon

Publication type:

Article

Brucella sp. sequence-type 27 associated with abortion in dwarf sperm whale Kogia sima.

Published in:

European Journal of Wildlife Research, 2021, v. 67, n. 4, p. 1, doi. 10.1007/s10344-021-01502-5

By:

Hernández-Mora, Gabriela;
González-Barrientos, Rocío;
Víquez-Ruíz, Eunice;
Palacios-Alfaro, José David;
Bettoni-Rodríguez, Gianmarco;
Gendre, Marlène;
Vincent, Charline;
Roca-Monge, Karol;
Ruiz-Villalobos, Nazareth;
Suárez-Esquivel, Marcela;
Cordero-Chavarría, Minor;
Chaves-Olarte, Esteban;
Thomson, Nicholas R.;
Barquero-Calvo, Elías;
Moreno, Edgardo;
Guzmán-Verri, Caterina

Publication type:

Article

The neglected role of antibody in protection against bacteremia caused by nontyphoidal strains of Salmonella in African children.

Published in:

2008

By:

MacLennan, Calman A.;
Gondwe, Esther N.;
Msefula, Chisomo L.;
Kingsley, Robert A.;
Thomson, Nicholas R.;
White, Sarah A.;
Goodall, Margaret;
Pickard, Derek J.;
Graham, Stephen M.;
Dougan, Gordon;
Hart, C. Anthony;
Molyneux, Malcolm E.;
Drayson, Mark T.

Publication type:

journal article

South Asia as a Reservoir for the Global Spread of Ciprofloxacin-Resistant Shigella sonnei: A Cross-Sectional Study.

Published in:

2016

By:

Chung The, Hao;
Rabaa, Maia A.;
Pham Thanh, Duy;
De Lappe, Niall;
Cormican, Martin;
Valcanis, Mary;
Howden, Benjamin P.;
Wangchuk, Sonam;
Bodhidatta, Ladaporn;
Mason, Carl J.;
Nguyen Thi Nguyen, To;
Vu Thuy, Duong;
Thompson, Corinne N.;
Phu Huong Lan, Nguyen;
Voong Vinh, Phat;
Ha Thanh, Tuyen;
Turner, Paul;
Sar, Poda;
Thwaites, Guy;
Thomson, Nicholas R.

Publication type:

journal article

Brucella Genetic Variability in Wildlife Marine Mammals Populations Relates to Host Preference and Ocean Distribution.

Published in:

Genome Biology & Evolution, 2017, v. 9, n. 7, p. 1901, doi. 10.1093/gbe/evx137

By:

Suárez-Esquivel, Marcela;
Baker, Kate S.;
Ruiz-Villalobos, Nazareth;
Hernández-Mora, Gabriela;
Barquero-Calvo, Elías;
González-Barrientos, Rocío;
Castillo-Zeledón, Amanda;
Jiménez-Rojas, César;
Chacón-Díaz, Carlos;
Cloeckaert, Axel;
Chaves-Olarte, Esteban;
Thomson, Nicholas R.;
Moreno, Edgardo;
Guzmán-Verri, Caterina

Publication type:

Article

Genome Evolution and Plasticity of Serratia marcescens, an Important Multidrug-Resistant Nosocomial Pathogen.

Published in:

Genome Biology & Evolution, 2014, v. 6, n. 8, p. 2096, doi. 10.1093/gbe/evu160

By:

Iguchi, Atsushi;
Nagaya, Yutaka;
Pradel, Elizabeth;
Ooka, Tadasuke;
Ogura, Yoshitoshi;
Katsura, Keisuke;
Kurokawa, Ken;
Oshima, Kenshiro;
Hattori, Masahira;
Parkhill, Julian;
Sebaihia, Mohamed;
Coulthurst, Sarah J.;
Gotoh, Naomasa;
Thomson, Nicholas R.;
Ewbank, Jonathan J.;
Hayashi, Tetsuya

Publication type:

Article

Quantitative Proteomics of the Infectious and Replicative Forms of Chlamydia trachomatis.

Published in:

PLoS ONE, 2016, v. 11, n. 2, p. 1, doi. 10.1371/journal.pone.0149011

By:

Skipp, Paul J. S.;
Hughes, Chris;
McKenna, Thérèse;
Edwards, Richard;
Langridge, James;
Thomson, Nicholas R.;
Clarke, Ian N.

Publication type:

Article

Identification of enterotoxigenic Escherichia coli (ETEC) clades with long-term global distribution.

Published in:

Nature Genetics, 2014, v. 46, n. 12, p. 1321, doi. 10.1038/ng.3145

By:

von Mentzer, Astrid;
Connor, Thomas R;
Wieler, Lothar H;
Semmler, Torsten;
Iguchi, Atsushi;
Thomson, Nicholas R;
Pickard, Derek;
Dougan, Gordon;
Rasko, David A;
Joffre, Enrique;
Wiklund, Gudrun;
Svennerholm, Ann-Mari;
Corander, Jukka;
Sjöling, Åsa

Publication type:

Article

Panakeia - a universal tool for bacterial pangenome analysis.

Published in:

BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08303-3

By:

Beier, Sina;
Thomson, Nicholas R

Publication type:

Article

The genus Serratia revisited by genomics.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32929-2

By:

Williams, David J.;
Grimont, Patrick A. D.;
Cazares, Adrián;
Grimont, Francine;
Ageron, Elisabeth;
Pettigrew, Kerry A.;
Cazares, Daniel;
Njamkepo, Elisabeth;
Weill, François-Xavier;
Heinz, Eva;
Holden, Matthew T. G.;
Thomson, Nicholas R.;
Coulthurst, Sarah J.

Publication type:

Article

Vibrio cholerae O139 genomes provide a clue to why it may have failed to usher in the eighth cholera pandemic.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31391-4

By:

Ramamurthy, Thandavarayan;
Pragasam, Agila Kumari;
Taylor-Brown, Alyce;
Will, Robert C.;
Vasudevan, Karthick;
Das, Bhabatosh;
Srivastava, Sunil Kumar;
Chowdhury, Goutam;
Mukhopadhyay, Asish K.;
Dutta, Shanta;
Veeraraghavan, Balaji;
Thomson, Nicholas R.;
Sharma, Naresh C.;
Nair, Gopinath Balakrish;
Takeda, Yoshifumi;
Ghosh, Amit;
Dougan, Gordon;
Mutreja, Ankur

Publication type:

Article

Assessing gut microbiota perturbations during the early phase of infectious diarrhea in Vietnamese children.

Published in:

Gut Microbes, 2018, v. 9, n. 1, p. 38, doi. 10.1080/19490976.2017.1361093

By:

The, Hao Chung;
Florez de Sessions, Paola;
Jie, Song;
Pham Thanh, Duy;
Thompson, Corinne N.;
Nguyen Ngoc Minh, Chau;
Chu, Collins Wenhan;
Tran, Tuan-Anh;
Thomson, Nicholas R.;
Thwaites, Guy E.;
Rabaa, Maia A.;
Hibberd, Martin;
Baker, Stephen

Publication type:

Article

Longitudinal analysis within one hospital in sub-Saharan Africa over 20 years reveals repeated replacements of dominant clones of Klebsiella pneumoniae and stresses the importance to include temporal patterns for vaccine design considerations.

Published in:

Genome Medicine, 2024, v. 16, n. 1, p. 1, doi. 10.1186/s13073-024-01342-3

By:

Heinz, Eva;
Pearse, Oliver;
Zuza, Allan;
Bilima, Sithembile;
Msefula, Chisomo;
Musicha, Patrick;
Siyabu, Patriciah;
Tewesa, Edith;
Graf, Fabrice E.;
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PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0181365

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Oshota, Olusegun;
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Molecular Biology & Evolution, 2022, v. 39, n. 1, p. 1, doi. 10.1093/molbev/msab306

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Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.01557

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Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.01130

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