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Identification of Platform-Independent Gene Expression Markers of Cisplatin Nephrotoxicity.
Published in:
Environmental Health Perspectives, 2004, v. 112, n. 4, p. 488, doi. 10.1289/ehp.6676
By:
- Thompson, Karol L.;
- Afshari, Cynthia A.;
- Amin, Rupesh P.;
- Bertram, Timothy A.;
- Car, Bruce;
- Cunningham, Michael;
- Kind, Clive;
- Kramer, Jeffrey A.;
- Lawton, Michael;
- Mirsky, Michael;
- Naciff, Jorge M.;
- Oreffo, Victor;
- Pine, P. Scott;
- Sistare, Frank D.
Publication type:
Article
Identification of Putative Gene-Based Markers of Renal Toxicity.
Published in:
Environmental Health Perspectives, 2004, v. 112, n. 4, p. 465, doi. 10.1289/ehp.6683
By:
- Amin, Rupesh P.;
- Vickers, Alison E.;
- Sistare, Frank;
- Thompson, Karol L.;
- Roman, Richard J.;
- Lawton, Michael;
- Kramer, Jeffrey;
- Hamadeh, Hisham K.;
- Collins, Jennifer;
- Grissom, Sherry;
- Bennett, Lee;
- Tucker, C. Jeffrey;
- Wild, Stacie;
- Kind, Clive;
- Oreffo, Victor;
- Davis II, John W.;
- Curtiss, Sandra;
- Naciff, Jorge M.;
- Cunningham, Michael
Publication type:
Article
Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories.
Published in:
BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-285
By:
- Boedigheimer, Michael J.;
- Wolfinger, Russell D.;
- Bass, Michael B.;
- Bushel, Pierre R.;
- Chou, Jeff W.;
- Cooper, Matthew;
- Corton, J. Christopher;
- Fostel, Jennifer;
- Hester, Susan;
- Lee, Janice S.;
- Fenglong Liu;
- Jie Liu;
- Hui-Rong Qian;
- Quackenbush, John;
- Pettit, Syril;
- Thompson, Karol L.
Publication type:
Article
Use of a mixed tissue RNA design for performance assessments on multiple microarray formats.
Published in:
Nucleic Acids Research, 2005, v. 33, n. 22, p. e187, doi. 10.1093/nar/gni186
By:
- Thompson, Karol L.;
- Rosenzweig, Barry A.;
- Pine, P. Scott;
- Retief, Jacques;
- Turpaz, Yaron;
- Afshari, Cynthia A.;
- Hamadeh, Hisham K.;
- Damore, Michael A.;
- Boedigheimer, Michael;
- Blomme, Eric;
- Ciurlionis, Rita;
- Waring, Jeffrey F.;
- Fuscoe, James C.;
- Paules, Richard;
- Tucker, Charles J.;
- Fare, Thomas;
- Coffey, Ernest M.;
- He, Yudong;
- Collins, Patrick J.;
- Jarnagin, Kurt
Publication type:
Article
Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR.
Published in:
BMC Biotechnology, 2018, v. 18, p. 1, doi. 10.1186/s12896-018-0415-4
By:
- Wolfinger, Russell D.;
- Beedanagari, Sudheer;
- Boitier, Eric;
- Chen, Tao;
- Couttet, Philippe;
- Ellinger-Ziegelbauer, Heidrun;
- Guillemain, Gregory;
- Mariet, Claire;
- Mouritzen, Peter;
- O’Lone, Raegan;
- Pine, P. Scott;
- Sharapova, Tatiana;
- Yan, Jian;
- Yuen, Peter S.;
- Thompson, Karol L.
Publication type:
Article
Loss of critical palindromic transgene promoter sequence in chemically induced Tg.AC mouse skin papillomas expressing transgene-derived mRNA.
Published in:
Molecular Carcinogenesis, 2001, v. 32, n. 4, p. 176, doi. 10.1002/mc.10009
By:
- Thompson, Karol L.;
- Rosenzweig, Barry A.;
- Honchel, Ronald;
- Cannon, Ronald E.;
- Blanchard, Kerry T.;
- Stoll, Raymond E.;
- Sistare, Frank D.
Publication type:
Article
Loss of palindromic symmetry in Tg.AC mice with a nonresponder phenotype.
Published in:
Molecular Carcinogenesis, 2001, v. 30, n. 2, p. 99, doi. 10.1002/1098-2744(200102)30:2<99::AID-MC1018>3.0.CO;2-7
By:
- Honchel, Ronald;
- Rosenzweig, Barry A.;
- Thompson, Karol L.;
- Blanchard, Kerry T.;
- Furst, Sylvia M.;
- Stoll, Raymond E.;
- Sistare, Frank D.
Publication type:
Article
Early alterations in heart gene expression profiles associated with doxorubicin cardiotoxicity in rats.
Published in:
Cancer Chemotherapy & Pharmacology, 2010, v. 66, n. 2, p. 303, doi. 10.1007/s00280-009-1164-9
By:
- Thompson, Karol L.;
- Rosenzweig, Barry A.;
- Jun Zhang;
- Knapton, Alan D.;
- Honchel, Ronald;
- Lipshultz, Steven E.;
- Retief, Jacques;
- Sistare, Frank D.;
- Herman, Eugene H.
Publication type:
Article
Comparison of Kidney Injury Molecule-1 and Other Nephrotoxicity Biomarkers in Urine and Kidney Following Acute Exposure to Gentamicin, Mercury, and Chromium.
Published in:
Toxicological Sciences, 2008, v. 101, n. 1, p. 159, doi. 10.1093/toxsci/kfm260
By:
- Yuzhao Zhou;
- Vishal S. Vaidya;
- Ronald P. Brown;
- Jun Zhang;
- Barry A. Rosenzweig;
- Karol L. Thompson;
- Terry J. Miller;
- Joseph V. Bonventre;
- Peter L. Goering
Publication type:
Article
The Utility of a Rodent Model in Detecting Pediatric Drug-Induced Nephrotoxicity.
Published in:
Toxicological Sciences, 2007, v. 99, n. 2, p. 637, doi. 10.1093/toxsci/kfm184
By:
- Espandiari, Parvaneh;
- Zhang, Jun;
- Rosenzweig, Barry A.;
- Vaidya, Vishal S.;
- Jinchun Sun;
- Schnackenberg, Laura;
- Herman, Eugene H.;
- Knapton, Alan;
- Bonventre, Joseph V.;
- Beger, Richard D.;
- Thompson, Karol L.;
- Hanig, Joseph
Publication type:
Article
Evaluation of in Vitro Reporter Gene Induction Assays for Use in a Rapid Prescreen for Compound Selection to Test Specificity in the Tg.AC Mouse Short-Term Carcinogenicity Assay.
Published in:
Toxicological Sciences, 2000, v. 57, n. 1, p. 43, doi. 10.1093/toxsci/57.1.43
By:
- Thompson, Karol L.;
- Rosenzweig, Barry A.;
- Tsong, Yi;
- Sistare, Frank D.
Publication type:
Article
Non-Lethal Endotoxin Injection: A Rat Model of Hypercoagulability.
Published in:
PLoS ONE, 2017, v. 12, n. 1, p. 1, doi. 10.1371/journal.pone.0169976
By:
- Brooks, Marjory B.;
- Turk, James R.;
- Guerrero, Abraham;
- Narayanan, Padma K.;
- Nolan, John P.;
- Besteman, Elizabeth G.;
- Wilson, Dennis W.;
- Thomas, Roberta A.;
- Fishman, Cindy E.;
- Thompson, Karol L.;
- Ellinger-Ziegelbauer, Heidrun;
- Pierson, Jennifer B.;
- Paulman, April;
- Chiang, Alan Y.;
- Schultze, Albert E.
Publication type:
Article
Analysis of variance components in gene expression data.
Published in:
Bioinformatics, 2004, v. 20, n. 9, p. 1436, doi. 10.1093/bioinformatics/bth118
By:
- James J. Chen;
- Robert R. Delongchamp;
- Chen-An Tsai;
- Huey-miin Hsueh;
- Frank Sistare;
- Karol L. Thompson;
- Varsha G. Desai;
- James C. Fuscoe
Publication type:
Article
An adaptable method using human mixed tissue ratiometric controls for benchmarking performance on gene expression microarrays in clinical laboratories.
Published in:
BMC Biotechnology, 2011, v. 11, n. 1, p. 38, doi. 10.1186/1472-6750-11-38
By:
- Pine, P. Scott;
- Rosenzweig, Barry A.;
- Thompson, Karol L.
Publication type:
Article
Characterization of the effect of sample quality on high density oligonucleotide microarray data using progressively degraded rat liver RNA.
Published in:
BMC Biotechnology, 2007, v. 7, p. 57, doi. 10.1186/1472-6750-7-57
By:
- Thompson, Karol L.;
- Pine, P. Scott;
- Rosenzweig, Barry A.;
- Turpaz, Yaron;
- Retief, Jacques
Publication type:
Article
Kidney Injury Biomarkers in Hypertensive, Diabetic, and Nephropathy Rat Models Treated with Contrast Media.
Published in:
Toxicologic Pathology, 2013, v. 41, n. 4, p. 662, doi. 10.1177/0192623312464122
By:
- Rouse, Rodney L.;
- Stewart, Sharron R.;
- Thompson, Karol L.;
- Zhang, Jun
Publication type:
Article
An Evaluation of the Hemizygous Transgenic Tg.AC Mouse for Carcinogenicity Testing of Pharmaceuticals. I. Evidence for a Confounding Nonresponder Phenotype
Published in:
Toxicologic Pathology, 1998, v. 26, n. 4, p. 532
By:
- Weaver, James L.;
- Contrera, Joseph-P.;
- Thompson, Karol L.;
- Strong, John M.;
- Ellison, Christopher D.;
- Anderson, Lawrence W.;
- Prasanna, Hullahalli R.;
- Long-Bradley, Patricia E.;
- Lin, Karl K.;
- Zhang, Jun;
- Sistare, Frank D.
Publication type:
Article
An Evaluation of the Hemizygous Transgenic Tg.AC Mouse for Carcinogenicity Testing of Pharmaceuticals. II. A Genotypic Marker that Predicts Tumorigenic Responsiveness
Published in:
Toxicologic Pathology, 1998, v. 26, n. 4, p. 548
By:
- Thompson, Karol L.;
- Rosenzweig, Barry A.;
- Sistare, Frank D.
Publication type:
Article
Absolute Measurement of Cardiac Injury-Induced microRNAs in Biofluids across Multiple Test Sites.
Published in:
Toxicological Sciences, 2016, v. 154, n. 1, p. 115, doi. 10.1093/toxsci/kfw143
By:
- Thompson, Karol L.;
- Boitier, Eric;
- Tao Chen;
- Couttet, Philippe;
- Ellinger-Ziegelbauer, Heidrun;
- Goetschy, Manuela;
- Guillemain, Gregory;
- Kanki, Masayuki;
- Kelsall, Janet;
- Mariet, Claire;
- de La Moureyre-Spire, Catherine;
- Mouritzen, Peter;
- Nassirpour, Rounak;
- O'Lone, Raegan;
- Pine, P. Scott;
- Rosenzweig, Barry A.;
- Sharapova, Tatiana;
- Smith, Aaron;
- Uchiyama, Hidefumi;
- Jian Yan
Publication type:
Article

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