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Protein Condensate Atlas from predictive models of heteromolecular condensate composition.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48496-7
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- Article
Multi-modal generative modeling for joint analysis of single-cell T cell receptor and gene expression data.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49806-9
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- Article
O13 Benchmarking a human pluripotent stem cell-derived hair-bearing skin organoid model to prenatal skin.
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- British Journal of Dermatology, 2024, v. 190, n. 6, p. e74, doi. 10.1093/bjd/ljae105.013
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- Article
Human γδ T cells in diverse tissues exhibit site-specific maturation dynamics across the life span.
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- Science Immunology, 2024, v. 9, n. 96, p. 1, doi. 10.1126/sciimmunol.adn3954
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- Article
Transcriptional signals of transformation in human cancer.
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- Genome Medicine, 2024, v. 16, n. 1, p. 1, doi. 10.1186/s13073-023-01279-z
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- Article
Dandelion uses the single-cell adaptive immune receptor repertoire to explore lymphocyte developmental origins.
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- Nature Biotechnology, 2024, v. 42, n. 1, p. 40, doi. 10.1038/s41587-023-01734-7
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- Article
Quantification of absolute transcription factor binding affinities in the native chromatin context using BANC-seq.
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- Nature Biotechnology, 2023, v. 41, n. 12, p. 1801, doi. 10.1038/s41587-023-01715-w
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- Article
CLICK-chemoproteomics and molecular dynamics simulation reveals pregnenolone targets and their binding conformations in Th2 cells.
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- Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1229703
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- Article
Key attributes of successful research institutes.
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- PLoS Biology, 2023, v. 21, n. 9, p. 1, doi. 10.1371/journal.pbio.3002267
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- Article
spinDrop: a droplet microfluidic platform to maximise single-cell sequencing information content.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40322-w
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- Article
Identification of visual cortex cell types and species differences using single-cell RNA sequencing.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-34590-1
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- Article
SOX9 maintains human foetal lung tip progenitor state by enhancing WNT and RTK signalling.
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- EMBO Journal, 2022, v. 41, n. 21, p. 1, doi. 10.15252/embj.2022111338
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- Article
A brain precursor atlas reveals the acquisition of developmental-like states in adult cerebral tumours.
- Published in:
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31408-y
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- Article
Community voices: policy proposals to promote inclusion in academia through the lens of women in science.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31616-6
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- Article
Integrated single cell and spatial transcriptomics reveal autoreactive differentiated B cells in joints of early rheumatoid arthritis.
- Published in:
- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-15293-5
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- Article
Differential abundance testing on single-cell data using k-nearest neighbor graphs.
- Published in:
- Nature Biotechnology, 2022, v. 40, n. 2, p. 245, doi. 10.1038/s41587-021-01033-z
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- Article
MultiMAP: dimensionality reduction and integration of multimodal data.
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- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02565-y
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- Article
High-throughput full-length single-cell RNA-seq automation.
- Published in:
- Nature Protocols, 2021, v. 16, n. 6, p. 2886, doi. 10.1038/s41596-021-00523-3
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- Article
Developmental bifurcation of human T follicular regulatory cells.
- Published in:
- Science Immunology, 2021, v. 6, n. 59, p. 1, doi. 10.1126/sciimmunol.abd8411
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- Article
Building a high-quality Human Cell Atlas.
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- 2021
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- Publication type:
- Letter
Single-cell analysis of human B cell maturation predicts how antibody class switching shapes selection dynamics.
- Published in:
- Science Immunology, 2021, v. 6, n. 56, p. 1, doi. 10.1126/sciimmunol.abe6291
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- Article
The Organoid Cell Atlas.
- Published in:
- 2021
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- Publication type:
- Letter
Reconstitution of a functional human thymus by postnatal stromal progenitor cells and natural whole-organ scaffolds.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-20082-7
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- Article
Gene signatures from scRNA‐seq accurately quantify mast cells in biopsies in asthma.
- Published in:
- Clinical & Experimental Allergy, 2020, v. 50, n. 12, p. 1428, doi. 10.1111/cea.13732
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- Article
Guidelines for reporting single-cell RNA-seq experiments.
- Published in:
- 2020
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- Publication type:
- Letter
Single-cell sequencing reveals clonal expansions of pro-inflammatory synovial CD8 T cells expressing tissue-homing receptors in psoriatic arthritis.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18513-6
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- Article
Single cell transcriptomics comes of age.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18158-5
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- Article
Tumors induce de novo steroid biosynthesis in T cells to evade immunity.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-17339-6
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- Article
Cell Atlas technologies and insights into tissue architecture.
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- Biochemical Journal, 2020, v. 477, n. 8, p. 1427, doi. 10.1042/BCJ20190341
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- Publication type:
- Article
CellPhoneDB: inferring cell–cell communication from combined expression of multi-subunit ligand–receptor complexes.
- Published in:
- Nature Protocols, 2020, v. 15, n. 4, p. 1484, doi. 10.1038/s41596-020-0292-x
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- Article
BBKNN: fast batch alignment of single cell transcriptomes.
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- Bioinformatics, 2020, v. 36, n. 3, p. 964, doi. 10.1093/bioinformatics/btz625
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- Publication type:
- Article
Single-cell transcriptomics identifies CD44 as a marker and regulator of endothelial to haematopoietic transition.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-019-14171-5
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- Publication type:
- Article
Single cell analysis of human foetal liver captures the transcriptional profile of hepatobiliary hybrid progenitors.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-11266-x
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- Article
In conversation with Sarah Teichmann.
- Published in:
- FEBS Journal, 2019, v. 286, n. 8, p. 1445, doi. 10.1111/febs.14806
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- Publication type:
- Article
Comparative analysis of sequencing technologies for single-cell transcriptomics.
- Published in:
- Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1676-5
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- Publication type:
- Article
A rapid and robust method for single cell chromatin accessibility profiling.
- Published in:
- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-07771-0
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- Publication type:
- Article
Single cell RNA-seq and ATAC-seq analysis of cardiac progenitor cell transition states and lineage settlement.
- Published in:
- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-07307-6
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- Publication type:
- Article
Genome-wide analyses reveal the IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation.
- Published in:
- Genome Medicine, 2018, v. 10, n. 1, p. N.PAG, doi. 10.1186/s13073-018-0589-3
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- Publication type:
- Article
Exponential scaling of single-cell RNA-seq in the past decade.
- Published in:
- Nature Protocols, 2018, v. 13, n. 4, p. 599, doi. 10.1038/nprot.2017.149
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- Article
The Human Cell Atlas.
- Published in:
- eLife, 2017, p. 1, doi. 10.7554/eLife.27041
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- Publication type:
- Article
A practical guide to single-cell RNA-sequencing for biomedical research and clinical applications.
- Published in:
- Genome Medicine, 2017, v. 9, n. 1, p. 1, doi. 10.1186/s13073-017-0467-4
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- Publication type:
- Article
Computational approaches for interpreting sc RNA-seq data.
- Published in:
- FEBS Letters, 2017, v. 591, n. 15, p. 2213, doi. 10.1002/1873-3468.12684
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- Article
Flipping between Polycomb repressed and active transcriptional states introduces noise in gene expression.
- Published in:
- Nature Communications, 2017, v. 8, n. 6, p. 1, doi. 10.1038/s41467-017-00052-2
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- Publication type:
- Article
Are cells from a snowman realistic? Cryopreserved tissues as a source for single-cell RNA-sequencing experiments.
- Published in:
- Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-017-1192-4
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- Article
Single-cell analysis at the threshold.
- Published in:
- Nature Biotechnology, 2016, v. 34, n. 11, p. 1111, doi. 10.1038/nbt.3721
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- Article
Genetics and immunity in the era of single-cell genomics.
- Published in:
- Human Molecular Genetics, 2016, v. 25, n. R2, p. R141, doi. 10.1093/hmg/ddw192
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- Article
Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation.
- Published in:
- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-0957-5
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- Publication type:
- Article
Single-cell genomics: coming of age.
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- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-0960-x
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- Publication type:
- Article
Classification of low quality cells from single-cell RNA-seq data.
- Published in:
- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-0888-1
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- Article
Corrigendum: Characterizing noise structure in single-cell RNA-seq distinguishes genuine from technical stochastic allelic expression.
- Published in:
- Nature Communications, 2016, v. 7, n. 1, p. 10415, doi. 10.1038/ncomms10415
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- Article