Works by Tasaki, Shinya

Results: 41

Structural variants linked to Alzheimer's disease and other common age-related clinical and neuropathologic traits.
Published in:
Genome Medicine, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13073-025-01444-6
By:
- Vialle, Ricardo A.;
- de Paiva Lopes, Katia;
- Li, Yan;
- Ng, Bernard;
- Schneider, Julie A.;
- Buchman, Aron S.;
- Wang, Yanling;
- Farfel, Jose M.;
- Barnes, Lisa L.;
- Wingo, Aliza P.;
- Wingo, Thomas S.;
- Seyfried, Nicholas T.;
- De Jager, Philip L.;
- Gaiteri, Chris;
- Tasaki, Shinya;
- Bennett, David A.
Publication type:
Article
Editorial: Methods in artificial intelligence for dementia 2024.
Published in:
Frontiers in Dementia, 2024, p. 1, doi. 10.3389/frdem.2024.1444825
By:
- Sadeghian, Roozbeh;
- Haider, Fasih;
- Fraser, Kathleen;
- Tasaki, Shinya;
- Muniz-Terrera, Graciela
Publication type:
Article
Digital quantification of the MMSE interlocking pentagon areas: a three-stage algorithm.
Published in:
Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-59194-1
By:
- Kim, Namhee;
- Truty, Timothy;
- Duke Han, S.;
- Heo, Moonseong;
- Buchman, Aron S.;
- Bennett, David A.;
- Tasaki, Shinya
Publication type:
Article
Unconventional Source of Neurotoxic Protein Aggregation from Organelle Off-Target Bax∆2 in Alzheimer's Disease.
Published in:
Biomolecules (2218-273X), 2023, v. 13, n. 6, p. 970, doi. 10.3390/biom13060970
By:
- Yao, Qi;
- Mascarenhas dos Santos, Anne Caroline;
- Zhang, Huaiyuan;
- Mañas, Adriana;
- Hussaini, Ammarah;
- Kim, Ujin;
- Xu, Congtai;
- Basheer, Sana;
- Tasaki, Shinya;
- Xiang, Jialing
Publication type:
Article
Cognition may link cortical IGFBP5 levels with motor function in older adults.
Published in:
PLoS ONE, 2019, v. 14, n. 8, p. 1, doi. 10.1371/journal.pone.0220968
By:
- Buchman, Aron S.;
- Yu, Lei;
- Petyuk, Vladislav A.;
- Gaiteri, Chris;
- Tasaki, Shinya;
- Blizinsky, Katherine D.;
- Schneider, Julie A.;
- De Jager, Philip L.;
- Bennett, David A.
Publication type:
Article
Transgenic mice overexpressing miR-137 in the brain show schizophrenia-associated behavioral deficits and transcriptome profiles.
Published in:
PLoS ONE, 2019, v. 14, n. 7, p. 1, doi. 10.1371/journal.pone.0220389
By:
- Arakawa, Yuuichi;
- Yokoyama, Kazumasa;
- Tasaki, Shinya;
- Kato, Junichi;
- Nakashima, Kosuke;
- Takeyama, Michiyasu;
- Nakatani, Atsushi;
- Suzuki, Motohisa
Publication type:
Article
Seasonal plasticity of cognition and related biological measures in adults with and without Alzheimer disease: Analysis of multiple cohorts.
Published in:
2018
By:
- Lim, Andrew S. P.;
- Gaiteri, Chris;
- Yu, Lei;
- Sohail, Shahmir;
- Swardfager, Walter;
- Tasaki, Shinya;
- Schneider, Julie A.;
- Paquet, Claire;
- Stuss, Donald T.;
- Masellis, Mario;
- Black, Sandra E.;
- Hugon, Jacques;
- Buchman, Aron S.;
- Barnes, Lisa L.;
- Bennett, David A.;
- De Jager, Philip L.
Publication type:
journal article
Association of Cortical β-Amyloid Protein in the Absence of Insoluble Deposits With Alzheimer Disease.
Published in:
JAMA Neurology, 2019, v. 76, n. 7, p. 818, doi. 10.1001/jamaneurol.2019.0834
By:
- Yu, Lei;
- Petyuk, Vladislav A.;
- Tasaki, Shinya;
- Boyle, Patricia A.;
- Gaiteri, Chris;
- Schneider, Julie A.;
- De Jager, Philip L.;
- Bennett, David A.
Publication type:
Article
Bayesian Network Reconstruction Using Systems Genetics Data: Comparison of MCMC Methods.
Published in:
Genetics, 2015, v. 199, n. 4, p. 973, doi. 10.1534/genetics.114.172619
By:
- Shinya Tasaki;
- Sauerwine, Ben;
- Hoff, Bruce;
- Hiroyoshi Toyoshiba;
- Gaiteri, Chris;
- Chaibub Neto, Elias
Publication type:
Article
Differential gene expression analysis based on linear mixed model corrects false positive inflation for studying quantitative traits.
Published in:
Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-43686-7
By:
- Tang, Shizhen;
- Buchman, Aron S.;
- Wang, Yanling;
- Avey, Denis;
- Xu, Jishu;
- Tasaki, Shinya;
- Bennett, David A.;
- Zheng, Qi;
- Yang, Jingjing
Publication type:
Article
Differential gene expression analysis based on linear mixed model corrects false positive inflation for studying quantitative traits.
Published in:
Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-43686-7
By:
- Tang, Shizhen;
- Buchman, Aron S.;
- Wang, Yanling;
- Avey, Denis;
- Xu, Jishu;
- Tasaki, Shinya;
- Bennett, David A.;
- Zheng, Qi;
- Yang, Jingjing
Publication type:
Article
Multi-omic Directed Networks Describe Features of Gene Regulation in Aged Brains and Expand the Set of Genes Driving Cognitive Decline.
Published in:
Frontiers in Genetics, 2018, p. N.PAG, doi. 10.3389/fgene.2018.00294
By:
- Tasaki, Shinya;
- Gaiteri, Chris;
- Mostafavi, Sara;
- Yu, Lei;
- Wang, Yanling;
- De Jager, Philip L.;
- Bennett, David A.
Publication type:
Article
Inferring protein expression changes from mRNA in Alzheimer's dementia using deep neural networks.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28280-1
By:
- Tasaki, Shinya;
- Xu, Jishu;
- Avey, Denis R.;
- Johnson, Lynnaun;
- Petyuk, Vladislav A.;
- Dawe, Robert J.;
- Bennett, David A.;
- Wang, Yanling;
- Gaiteri, Chris
Publication type:
Article
Cascading epigenomic analysis for identifying disease genes from the regulatory landscape of GWAS variants.
Published in:
PLoS Genetics, 2021, v. 17, n. 11, p. 1, doi. 10.1371/journal.pgen.1009918
By:
- Ng, Bernard;
- Casazza, William;
- Kim, Nam Hee;
- Wang, Chendi;
- Farhadi, Farnush;
- Tasaki, Shinya;
- Bennett, David A.;
- De Jager, Philip L.;
- Gaiteri, Christopher;
- Mostafavi, Sara
Publication type:
Article
Explainable deep learning approach for extracting cognitive features from hand-drawn images of intersecting pentagons.
Published in:
NPJ Digital Medicine, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s41746-023-00904-w
By:
- Tasaki, Shinya;
- Kim, Namhee;
- Truty, Tim;
- Zhang, Ada;
- Buchman, Aron S.;
- Lamar, Melissa;
- Bennett, David A.
Publication type:
Article
G-protein coupled estrogen receptor 1, amyloid-β, and tau tangles in older adults.
Published in:
Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06272-9
By:
- Oveisgharan, Shahram;
- Yu, Lei;
- de Paiva Lopes, Katia;
- Petyuk, Vladislav A.;
- Tasaki, Shinya;
- Vialle, Ricardo;
- Menon, Vilas;
- Wang, Yanling;
- De Jager, Philip L.;
- Schneider, Julie A.;
- Bennett, David A.
Publication type:
Article
Cortical Proteins Associated With Cognitive Resilience in Community-Dwelling Older Persons.
Published in:
2020
By:
- Yu, Lei;
- Tasaki, Shinya;
- Schneider, Julie A.;
- Arfanakis, Konstantinos;
- Duong, Duc M.;
- Wingo, Aliza P.;
- Wingo, Thomas S.;
- Kearns, Nicola;
- Thatcher, Gregory R. J.;
- Seyfried, Nicholas T.;
- Levey, Allan I.;
- De Jager, Philip L.;
- Bennett, David A.
Publication type:
journal article
Polygenic risk associated with Alzheimer's disease and other traits influences genes involved in T cell signaling and activation.
Published in:
Frontiers in Immunology, 2024, p. 1
By:
- Dressman, Dallin;
- Tasaki, Shinya;
- Yu, Lei;
- Schneider, Julie;
- Bennett, David A.;
- Elyaman, Wassim;
- Vardarajan, Badri
Publication type:
Article
CLK-dependent exon recognition and conjoined gene formation revealed with a novel small molecule inhibitor.
Published in:
Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-016-0008-7
By:
- Funnell, Tyler;
- Tasaki, Shinya;
- Oloumi, Arusha;
- Araki, Shinsuke;
- Kong, Esther;
- Yap, Damian;
- Nakayama, Yusuke;
- Hughes, Christopher S.;
- Cheng, S.-W. Grace;
- Tozaki, Hirokazu;
- Iwatani, Misa;
- Sasaki, Satoshi;
- Ohashi, Tomohiro;
- Miyazaki, Tohru;
- Morishita, Nao;
- Morishita, Daisuke;
- Ogasawara-Shimizu, Mari;
- Ohori, Momoko;
- Nakao, Shoichi;
- Karashima, Masatoshi
Publication type:
Article
Multi-omics monitoring of drug response in rheumatoid arthritis in pursuit of molecular remission.
Published in:
Nature Communications, 2018, v. 9, p. 1, doi. 10.1038/s41467-018-05044-4
By:
- Shinya Tasaki;
- Katsuya Suzuki;
- Yoshiaki Kassai;
- Masaru Takeshita;
- Atsuko Murota;
- Yasushi Kondo;
- Tatsuya Ando;
- Yusuke Nakayama;
- Yuumi Okuzono;
- Maiko Takiguchi;
- Rina Kurisu;
- Takahiro Miyazaki;
- Keiko Yoshimoto;
- Hidekata Yasuoka;
- Kunihiro Yamaoka;
- Rimpei Morita;
- Akihiko Yoshimura;
- Hiroyoshi Toyoshiba;
- Tsutomu Takeuchi
Publication type:
Article
Failure to confirm CNVs as of aetiological significance in twin pairs discordant for schizophrenia.
Published in:
2010
By:
- Ono, Shinji;
- Imamura, Akira;
- Tasaki, Shinya;
- Kurotaki, Naohiro;
- Ozawa, Hiroki;
- Yoshiura, Koh-ichiro;
- Okazaki, Yuji
Publication type:
journal article
Associations of VGF with Neuropathologies and Cognitive Health in Older Adults.
Published in:
Annals of Neurology, 2023, v. 94, n. 2, p. 232, doi. 10.1002/ana.26676
By:
- Yu, Lei;
- Petyuk, Vladislav A.;
- Lopes, Katia de Paiva;
- Tasaki, Shinya;
- Menon, Vilas;
- Wang, Yanling;
- Schneider, Julie A.;
- De Jager, Philip L.;
- Bennett, David A.
Publication type:
Article
SR-TWAS: leveraging multiple reference panels to improve transcriptome-wide association study power by ensemble machine learning.
Published in:
Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-50983-w
By:
- Parrish, Randy L.;
- Buchman, Aron S.;
- Tasaki, Shinya;
- Wang, Yanling;
- Avey, Denis;
- Xu, Jishu;
- De Jager, Philip L.;
- Bennett, David A.;
- Epstein, Michael P.;
- Yang, Jingjing
Publication type:
Article
The Molecular and Neuropathological Consequences of Genetic Risk for Alzheimer's Dementia.
Published in:
Frontiers in Neuroscience, 2018, p. N.PAG, doi. 10.3389/fnins.2018.00699
By:
- Tasaki, Shinya;
- Gaiteri, Chris;
- Mostafavi, Sara;
- De Jager, Philip L.;
- Bennett, David A.
Publication type:
Article
Gene expression and DNA methylation are extensively coordinated with MRI-based brain microstructural characteristics.
Published in:
2019
By:
- Gaiteri, Chris;
- Dawe, Robert;
- Mostafavi, Sara;
- Blizinsky, Katherine D.;
- Tasaki, Shinya;
- Komashko, Vitalina;
- Yu, Lei;
- Wang, Yanling;
- Schneider, Julie A.;
- Arfanakis, Konstantinos;
- De Jager, Philip L.;
- Bennett, David A.
Publication type:
journal article
Proteome-Wide Discovery of Cortical Proteins That May Provide Motor Resilience to Offset the Negative Effects of Pathologies in Older Adults.
Published in:
Journals of Gerontology Series A: Biological Sciences & Medical Sciences, 2023, v. 78, n. 3, p. 494, doi. 10.1093/gerona/glac105
By:
- Buchman, Aron S;
- Yu, Lei;
- Klein, Hans-Ulrich;
- Zammit, Andrea R;
- Oveisgharan, Shahram;
- Grodstein, Francine;
- Tasaki, Shinya;
- Levey, Allan I;
- Seyfried, Nicholas T;
- Bennett, David A
Publication type:
Article
Robust, scalable, and informative clustering for diverse biological networks.
Published in:
Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03062-0
By:
- Gaiteri, Chris;
- Connell, David R.;
- Sultan, Faraz A.;
- Iatrou, Artemis;
- Ng, Bernard;
- Szymanski, Boleslaw K.;
- Zhang, Ada;
- Tasaki, Shinya
Publication type:
Article
Genetic risk for Alzheimer's dementia predicts motor deficits through multi-omic systems in older adults.
Published in:
Translational Psychiatry, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41398-019-0577-4
By:
- Tasaki, Shinya;
- Gaiteri, Chris;
- Petyuk, Vladislav A.;
- Blizinsky, Katherine D.;
- De Jager, Philip L.;
- Buchman, Aron S.;
- Bennett, David A.
Publication type:
Article
Cortical proteins may provide motor resilience in older adults.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-90859-3
By:
- Buchman, Aron S.;
- Yu, Lei;
- Oveisgharan, Shahram;
- Petyuk, Vladislav A.;
- Tasaki, Shinya;
- Gaiteri, Chris;
- Wilson, Robert S.;
- Grodstein, Francine;
- Schneider, Julie A.;
- Klein, Hans-Ulrich;
- De Jager, Philip L.;
- Bennett, David A.
Publication type:
Article
The MIND diet, brain transcriptomic alterations, and dementia.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, n. 9, p. 5996, doi. 10.1002/alz.14062
By:
- Li, Jun;
- Capuano, Ana W.;
- Agarwal, Puja;
- Arvanitakis, Zoe;
- Wang, Yanling;
- De Jager, Philip L.;
- Schneider, Julie A.;
- Tasaki, Shinya;
- de Paiva Lopes, Katia;
- Hu, Frank B.;
- Bennett, David A;
- Liang, Liming;
- Grodstein, Francine
Publication type:
Article
Proteins linking APOE ɛ4 with Alzheimer's disease.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, n. 7, p. 4499, doi. 10.1002/alz.13867
By:
- Oveisgharan, Shahram;
- Yu, Lei;
- de Paiva Lopes, Katia;
- Tasaki, Shinya;
- Wang, Yanling;
- Menon, Vilas;
- Schneider, Julie A.;
- Seyfried, Nicholas T.;
- Bennett, David A.
Publication type:
Article
Associations of cortical SPP1 and ITGAX with cognition and common neuropathologies in older adults.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, n. 1, p. 525, doi. 10.1002/alz.13474
By:
- Lopes, Katia de Paiva;
- Yu, Lei;
- Shen, Xianli;
- Qiu, Yiguo;
- Tasaki, Shinya;
- Iatrou, Artemis;
- Beeri, Michal Schnaider;
- Seyfried, Nicholas T.;
- Menon, Vilas;
- Wang, Yanling;
- Schneider, Julie A.;
- Cantor, Harvey;
- Bennett, David A.
Publication type:
Article
Spatial Transcriptomics of Human Postmortem Brain Tissue Uncovers Molecular Pathways Associated with Amyloid‐Beta Plaques.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2023, v. 19, p. 1, doi. 10.1002/alz.077668
By:
- Avey, Denis;
- Ng, Bernard;
- Iatrou, Artemis;
- Vialle, Ricardo A;
- Lopes, Katia de Paiva;
- Tasaki, Shinya;
- Xu, Jishu;
- De Tissera, Sashini L;
- Flood, Daniel;
- Bennett, David A. A;
- Wang, Yanling
Publication type:
Article
Investigating the role of structural variants in Alzheimer's Disease and AD‐Related traits.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2023, v. 19, p. 1, doi. 10.1002/alz.075082
By:
- Vialle, Ricardo A;
- Lopes, Katia de Paiva;
- Tasaki, Shinya;
- Schneider, Julie A;
- De Jager, Philip L;
- Bennett, David A. A
Publication type:
Article
Chasing the cell type‐specific molecular networks involved in Alzheimer's Disease.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2023, v. 19, p. 1, doi. 10.1002/alz.073444
By:
- Lopes, Katia de Paiva;
- Vialle, Ricardo A;
- Green, Gilad Sahar;
- Fujita, Masashi;
- Wang, Yanling;
- Gaiteri, Chris;
- Menon, Vilas;
- De Jager, Philip L;
- Habib, Naomi;
- Tasaki, Shinya;
- Bennett, David A. A
Publication type:
Article
Spatial Transcriptomics of Human Postmortem Brain Tissue Uncovers Molecular Pathways Associated with Amyloid‐Beta Plaques.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2023, v. 19, p. 1, doi. 10.1002/alz.077668
By:
- Avey, Denis;
- Ng, Bernard;
- Iatrou, Artemis;
- Vialle, Ricardo A;
- Lopes, Katia de Paiva;
- Tasaki, Shinya;
- Xu, Jishu;
- De Tissera, Sashini L;
- Flood, Daniel;
- Bennett, David A. A;
- Wang, Yanling
Publication type:
Article
Investigating the role of structural variants in Alzheimer's Disease and AD‐Related traits.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2023, v. 19, p. 1, doi. 10.1002/alz.075082
By:
- Vialle, Ricardo A;
- Lopes, Katia de Paiva;
- Tasaki, Shinya;
- Schneider, Julie A;
- De Jager, Philip L;
- Bennett, David A. A
Publication type:
Article
Chasing the cell type‐specific molecular networks involved in Alzheimer's Disease.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2023, v. 19, p. 1, doi. 10.1002/alz.073444
By:
- Lopes, Katia de Paiva;
- Vialle, Ricardo A;
- Green, Gilad Sahar;
- Fujita, Masashi;
- Wang, Yanling;
- Gaiteri, Chris;
- Menon, Vilas;
- De Jager, Philip L;
- Habib, Naomi;
- Tasaki, Shinya;
- Bennett, David A. A
Publication type:
Article
Identification of novel genes associated with dysregulation of B cells in patients with primary Sjögren's syndrome.
Published in:
Arthritis Research & Therapy, 2020, v. 22, n. 1, p. 1, doi. 10.1186/s13075-020-02248-2
By:
- Inamo, Jun;
- Suzuki, Katsuya;
- Takeshita, Masaru;
- Kassai, Yoshiaki;
- Takiguchi, Maiko;
- Kurisu, Rina;
- Okuzono, Yuumi;
- Tasaki, Shinya;
- Yoshimura, Akihiko;
- Takeuchi, Tsutomu
Publication type:
Article
Identification of Novel Schizophrenia Loci by Homozygosity Mapping Using DNA Microarray Analysis.
Published in:
PLoS ONE, 2011, v. 6, n. 5, p. 1, doi. 10.1371/journal.pone.0020589
By:
- Kurotaki, Naohiro;
- Tasaki, Shinya;
- Mishima, Hiroyuki;
- Ono, Shinji;
- Imamura, Akira;
- Kikuchi, Taeko;
- Nishida, Nao;
- Tokunaga, Katsushi;
- Yoshiura, Koh-ichiro;
- Ozawa, Hiroki
Publication type:
Article
Phosphoproteomics-Based Modeling Defines the Regulatory Mechanism Underlying Aberrant EGFR Signaling.
Published in:
PLoS ONE, 2010, v. 5, n. 11, p. 1, doi. 10.1371/journal.pone.0013926
By:
- Tasaki, Shinya;
- Nagasaki, Masao;
- Kozuka-Hata, Hiroko;
- Semba, Kentaro;
- Gotoh, Noriko;
- Hattori, Seisuke;
- Inoue, Jun-ichiro;
- Yamamoto, Tadashi;
- Miyano, Satoru;
- Sugano, Sumio;
- Oyama, Masaaki
Publication type:
Article