Works by Tan, Tin Wee

Results: 67

The S-star trial bioinformatics course: An on-line learning success.

Published in:

Biochemistry & Molecular Biology Education, 2003, v. 31, n. 1, p. 20, doi. 10.1002/bmb.2003.494031010160

By:

Lim, Yun Ping;
Höög, Jan-Olov;
Gardner, Phyllis;
Ranganathan, Shoba;
Andersson, Siv;
Subbiah, Subramanian;
Tan, Tin Wee;
Hide, Winston;
Weiss, Anthony S.

Publication type:

Article

ASGS: an alternative splicing graph web service.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 11, p. w444, doi. 10.1093/nar/gkl268

By:

Bollina, Durgaprasad;
Lee, Bernett T. K.;
Tan, Tin Wee;
Ranganathan, Shoba

Publication type:

Article

SDPMOD: an automated comparative modeling server for small disulfide-bonded proteins.

Published in:

Nucleic Acids Research, 2004, v. 32, n. suppl 2, p. w356, doi. 10.1093/nar/gkh394

By:

Kong, Lesheng;
Lee, Bernett Teck Kwong;
Tong, Joo Chuan;
Tan, Tin Wee;
Ranganathan, Shoba

Publication type:

Article

Xpro: database of eukaryotic protein‐encoding genes.

Published in:

Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d59

By:

Gopalan, Vivek;
Tan, Tin Wee;
Lee, Bernett T. K.;
Ranganathan, Shoba

Publication type:

Article

MGAlignIt: a web service for the alignment of mRNA/EST and genomic sequences.

Published in:

Nucleic Acids Research, 2003, v. 31, n. 13, p. 3533, doi. 10.1093/nar/gkg561

By:

Lee, Bernett T. K.;
Tan, Tin Wee;
Ranganathan, Shoba

Publication type:

Article

Architecture of population-differentiated polymorphisms in the human genome.

Published in:

PLoS ONE, 2019, v. 14, n. 10, p. 1, doi. 10.1371/journal.pone.0224089

By:

Bachtiar, Maulana;
Jin, Yu;
Wang, Jingbo;
Tan, Tin Wee;
Chong, Samuel S.;
Ban, Kenneth H. K.;
Lee, Caroline G. L.

Publication type:

Article

Automatic synchronization and distribution of biological databases and software over low-bandwidth networks among developing countries.

Published in:

Bioinformatics, 2008, v. 24, n. 2, p. 299, doi. 10.1093/bioinformatics/btm570

By:

Unitsa Sangket;
Amornrat Phongdara;
Wilaiwan Chotigeat;
Darran Nathan;
Woo-Yeon Kim;
Jong Bhak;
Chumpol Ngamphiw;
Sissades Tongsima;
Asif M. Khan;
Honghuang Lin;
Tin Wee Tan

Publication type:

Article

CASVM: web server for SVM-based prediction of caspase substrates cleavage sites.

Published in:

Bioinformatics, 2007, v. 23, n. 23, p. 3241, doi. 10.1093/bioinformatics/btm334

By:

Lawrence J.K. Wee;
Tin Wee Tan;
Shoba Ranganathan

Publication type:

Article

In silico grouping of peptide/HLA class I complexes using structural interaction characteristics.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 177, doi. 10.1093/bioinformatics/btl563

By:

Joo Chuan Tong;
Tin Wee Tan;
Shoba Ranganathan

Publication type:

Article

Prediction of HLA-DQ3.2β Ligands: evidence of multiple registers in class II binding peptides.

Published in:

Bioinformatics, 2006, v. 22, n. 10, p. 1232, doi. 10.1093/bioinformatics/btl071

By:

Joo Chuan Tong;
Guang Lan Zhang;
Tin Wee Tan;
J. Thomas August;
Vladimir Brusic;
Shoba Ranganathan

Publication type:

Article

Bio-Mirror project for public bio-data distribution.

Published in:

Bioinformatics, 2004, v. 20, n. 17, p. 3238, doi. 10.1093/bioinformatics/bth219

By:

Don Gilbert;
Yoshihiro Ugawa;
Markus Buchhorn;
Tan Tin Wee;
Akira Mizushima;
Hyunchul Kim;
Kilnam Chon;
Seyeon Weon;
Juncai Ma;
Yoshihiro Ichiyanagi;
Der-Ming Liou;
Somnuk Keretho;
Suhaimi Napis

Publication type:

Article

MPID: MHC-Peptide Interaction Database for sequence-structure-function information on peptides binding to MHC molecules.

Published in:

Bioinformatics, 2003, v. 19, n. 2, p. 309, doi. 10.1093/bioinformatics/19.2.309

By:

Govindarajan, Kunde Ramamoorthy;
Kangueane, Pandjassarame;
Tan, Tin Wee;
Ranganathan, Shoba

Publication type:

Article

XdomView: protein domain and exon position visualization.

Published in:

Bioinformatics, 2003, v. 19, n. 1, p. 159, doi. 10.1093/bioinformatics/19.1.159

By:

Vivek, Gopalan;
Tan, Tin Wee;
Ranganathan, Shoba

Publication type:

Article

Generation of a database containing discordant intron positions in eukaryotic genes (MIDB).

Published in:

Bioinformatics, 2001, v. 17, n. 8, p. 671, doi. 10.1093/bioinformatics/17.8.671

By:

Sakharkar, Meena K.;
Tan, Tin Wee;
de Souza, Sandro J.

Publication type:

Article

Cladogramer: incorporating haplotype frequency into cladogram analysis.

Published in:

Bioinformatics, 2001, v. 17, n. 5, p. 481, doi. 10.1093/bioinformatics/17.5.481

By:

Zhang, Louxin;
Heng, Chew-Kiat;
Tan, Tin Wee

Publication type:

Article

Development of a clinical decision support system for diabetes care: A pilot study.

Published in:

PLoS ONE, 2017, v. 12, n. 2, p. 1, doi. 10.1371/journal.pone.0173021

By:

Sim, Livvi Li Wei;
Ban, Kenneth Hon Kim;
Tan, Tin Wee;
Sethi, Sunil Kumar;
Loh, Tze Ping

Publication type:

Article

Distinct Host Tropism Protein Signatures to Identify Possible Zoonotic Influenza A Viruses.

Published in:

PLoS ONE, 2016, v. 11, n. 2, p. 1, doi. 10.1371/journal.pone.0150173

By:

Eng, Christine L. P.;
Tong, Joo Chuan;
Tan, Tin Wee

Publication type:

Article

Predicting Zoonotic Risk of Influenza A Viruses from Host Tropism Protein Signature Using Random Forest.

Published in:

International Journal of Molecular Sciences, 2017, v. 18, n. 6, p. 1135, doi. 10.3390/ijms18061135

By:

Eng, Christine L. P.;
Tin Wee Tan;
Joo Chuan Tong

Publication type:

Article

A global initiative on addressing bioinformatics' grand challenges.

Published in:

Briefings in Bioinformatics, 2024, v. 25, n. 4, p. 1, doi. 10.1093/bib/bbae278

By:

Khan, Asif M;
Işık, Esra Büşra;
Tan, Tin Wee

Publication type:

Article

Methods and protocols for prediction of immunogenic epitopes.

Published in:

Briefings in Bioinformatics, 2007, v. 8, n. 2, p. 96, doi. 10.1093/bib/bb1038

By:

Joo Chuan Tong;
Tin Wee Tan;
Ganathan, Shoba Ran

Publication type:

Article

Modeling the structure of bound peptide ligands to major histocompatibility complex.

Published in:

Protein Science: A Publication of the Protein Society, 2004, v. 13, n. 9, p. 2523, doi. 10.1110/ps.04631204

By:

Tong, Joo Chuan;
Tan, Tin Wee;
Ranganathan, Shoba

Publication type:

Article

Exploring the transcriptome of non-model oleaginous microalga Dunaliella tertiolecta through high-throughput sequencing and high performance computing.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1551-x

By:

Lina Yao;
Kenneth Wei Min Tan;
Tin Wee Tan;
Yuan Kun Lee

Publication type:

Article

InCoB2014: Systems Biology update from the Asia-Pacific.

Published in:

BMC Systems Biology, 2014, v. 8, p. 1, doi. 10.1186/1752-0509-8-S4-I1

By:

Ranganathan, Shoba;
Tin Wee Tan;
Schönbach, Christian

Publication type:

Article

InCoB2013 introduces Systems Biology as a major conference theme.

Published in:

BMC Systems Biology, 2013, v. 7, p. 1, doi. 10.1186/1752-0509-7-S3-S1

By:

Schönbach, Christian;
Bairong Shen;
Tin Wee Tan;
Ranganathan, Shoba

Publication type:

Article

GIW and InCoB, two premier bioinformatics conferences in Asia with a combined 40 years of history.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/1471-2164-16-S12-I1

By:

Schönbach, Christian;
Horton, Paul;
Siu-Ming Yiu;
Tin Wee Tan;
Ranganathan, Shoba

Publication type:

Article

InCoB2014: mining biological data from genomics for transforming industry and health.

Published in:

BMC Genomics, 2014, v. 15, p. 1, doi. 10.1186/1471-2164-15-S9-I1

By:

Schönbach, Christian;
Tin Wee Tan;
Ranganathan, Shoba

Publication type:

Article

Simple re-instantiation of small databases using cloud computing.

Published in:

BMC Genomics, 2013, v. 14, p. 1, doi. 10.1186/1471-2164-14-S5-S13

By:

Tin Wee Tan;
Chao Xie;
De Silva, Mark;
Kuan Siong Lim;
Patro, C. Pawan K.;
Shen Jean Lim;
Govindarajan, Kunde Ramamoorthy;
Joo Chuan Tong;
Khar Heng Choo;
Ranganathan, Shoba;
Khan, Asif M.

Publication type:

Article

Advances in translational bioinformatics and population genomics in the Asia-Pacific.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S1

By:

Ranagathan, Shoba;
Tongsima, Sissades;
Chan, Jonathan;
Tin Wee Tan;
Schönbach, Christian

Publication type:

Article

GIW and InCoB are advancing bioinformatics in the Asia-Pacific.

Published in:

BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/1471-2105-16-S18-I1

By:

Schönbach, Christian;
Horton, Paul;
Siu-Ming Yiu;
Tin Wee Tan;
Ranganathan, Shoba

Publication type:

Article

RNA-Seq transcriptomic analysis with Bag2D software identifies key pathways enhancing lipid yield in a high lipid-producing mutant of the non-model green alga Dunaliella tertiolecta.

Published in:

Biotechnology for Biofuels, 2015, v. 8, p. 1, doi. 10.1186/s13068-015-0382-0

By:

Lina Yao;
Tin Wee Tan;
Yi-Kai Ng;
Hon Kim Ban, Kenneth;
Hui Shen;
Huixin Lin;
Yuan Kun Lee

Publication type:

Article

InCoB2014: bioinformatics to tackle the data to knowledge challenge.

Published in:

BMC Bioinformatics, 2014, v. 15, n. Suppl 16, p. 1, doi. 10.1186/1471-2105-15-S16-I1

By:

Ranganathan, Shoba;
Tan, Tin Wee;
Schönbach, Christian

Publication type:

Article

InCoB2012 Conference: from biological data to knowledge to technological breakthroughs.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 17, p. 1, doi. 10.1186/1471-2105-13-S17-S1

By:

Schönbach, Christian;
Tongsima, Sissades;
Chan, Jonathan;
Brusic, Vladimir;
Tin Wee Tan;
Ranagathan, Shoba

Publication type:

Article

Towards big data science in the decade ahead from ten years of InCoB and the 1st ISCB-Asia Joint Conference.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 13, p. 1, doi. 10.1186/1471-2105-12-S13-S1

By:

Ranganathan, Shoba;
Schönbach, Christian;
Kelso, Janet;
Rost, Burkhard;
Nathan, Sheila;
Tan, Tin Wee

Publication type:

Article

T3SEdb: data warehousing of virulence effectors secreted by the bacterial Type III Secretion System.

Published in:

BMC Bioinformatics, 2010, v. 11, p. 1

By:

Tay, Daniel Ming Ming;
Govindarajan, Kunde Ramamoorthy;
Khan, Asif M.;
Ong, Terenze Yao Rui;
Samad, Hanif M.;
Soh, Wei Wei;
Tong, Minyan;
Zhang, Fan;
Tan, Tin Wee

Publication type:

Article

InCoB2010 -- 9th International Conference on Bioinformatics at Tokyo, Japan, September 26-28, 2010.

Published in:

2010

By:

Schönbach, Christian;
Nakai, Kenta;
Tan, Tin Wee;
Ranganathan, Shoba

Publication type:

Proceeding

A comprehensive assessment of N-terminal signal peptides prediction methods.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S15-S2

By:

Khar Heng Choo;
Tin Wee Tan;
Ranganathan, Shoba

Publication type:

Article

The implementation of e-learning tools to enhance undergraduate bioinformatics teaching and learning: a case study in the National University of Singapore.

Published in:

2009

By:

Shen Jean Lim;
Khan, Asif Mohammad;
De Silva, Mark;
Kuan Siong Lim;
Yongli Hu;
Chay Hoon Tan;
Tin Wee Tan

Publication type:

Case Study

Emerging strengths in Asia Pacific bioinformatics.

Published in:

BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-S12-S1

By:

Ranganathan, Shoba;
Wen-Lian Hsu;
Ueng-Cheng Yang;
Tin Wee Tan

Publication type:

Article

Rule-based knowledge aggregation for large-scale protein sequence analysis of influenza A viruses.

Published in:

BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-S1-S7

By:

Miotto, Olivo;
Tan, Tin Wee;
Brusic, Vladimir

Publication type:

Article

Identification of human-to-human transmissibility factors in PB2 proteins of influenza A by large-scale mutual information analysis.

Published in:

BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-S1-S18

By:

Miotto, Olivo;
Heiny, A. T.;
Tan, Tin Wee;
August, J. Thomas;
Brusic, Vladimir

Publication type:

Article

Bioinformatics research in the Asia Pacific: a 2007 update.

Published in:

BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-S1-S1

By:

Ranganathan, Shoba;
Gribskov, Michael;
Tin Wee Tan

Publication type:

Article

Prediction of desmoglein-3 peptides reveals multiple shared T-cell epitopes in HLA DR4- and DR6- associated Pemphigus vulgaris.

Published in:

BMC Bioinformatics, 2006, v. 7, p. S7, doi. 10.1186/1471-2105-7-S5-S7

By:

Joo Chuan Tong;
Tin Wee Tan;
Sinha, Animesh A.;
Ranganathan, Shoba

Publication type:

Article

Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virus.

Published in:

BMC Bioinformatics, 2006, v. 7, p. S4, doi. 10.1186/1471-2105-7-S5-S4

By:

Khan, Asif M.;
Heiny, A. T.;
Lee, Kenneth X.;
Srinivasan, K. N.;
Tin Wee Tan;
August, J. Thomas;
Brusic, Vladimir

Publication type:

Article

SVM-based prediction of caspase substrate cleavage sites.

Published in:

BMC Bioinformatics, 2006, v. 7, p. S14, doi. 10.1186/1471-2105-7-S5-S14

By:

Wee, Lawrence J. K.;
Tin Wee Tan;
Ranganathan, Shoba

Publication type:

Article

Establishing bioinformatics research in the Asia Pacific.

Published in:

BMC Bioinformatics, 2006, v. 7, p. S1, doi. 10.1186/1471-2105-7-S5-S1

By:

Ranganathan, Shoba;
Tammi, Martti;
Gribskov, Michael;
Tin Wee Tan

Publication type:

Article

SPdb -- a signal peptide database.

Published in:

BMC Bioinformatics, 2005, v. 6, p. 1, doi. 10.1186/1471-2105-6-249

By:

Khar Heng Choo;
Tin Wee Tan;
Ranganathan, Shoba

Publication type:

Article

DEDB: a database of Drosophila melanogaster exons in splicing graph form.

Published in:

BMC Bioinformatics, 2004, v. 5, p. 1, doi. 10.1186/1471-2105-5-189

By:

Lee, Bernett T. K.;
Tin Wee Tan;
Ranganathan, Shoba

Publication type:

Article

APBioNet—Transforming Bioinformatics in the Asia-Pacific Region.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 10, p. 1, doi. 10.1371/journal.pcbi.1003317

By:

Khan, Asif M.;
Tan, Tin Wee;
Schönbach, Christian;
Ranganathan, Shoba

Publication type:

Article

Single-cell genomic profiling of acute myeloid leukemia for clinical use: A pilot study.

Published in:

Oncology Letters, 2017, v. 13, n. 3, p. 1625, doi. 10.3892/ol.2017.5669

By:

YAN, BENEDICT;
YONGLI HU;
BAN, KENNETH H. K.;
ZENIA TIANG;
NG, CHRISTOPHER;
LEE, JOANNE;
TAN, WILSON;
CHIU, LILY;
TIN WEE TAN;
SEAH, ELAINE;
CHIN HIN NG;
WEE-JOO CHNG;
FOO, ROGER

Publication type:

Article

Elevated acetyl-CoA by amino acid recycling fuels microalgal neutral lipid accumulation in exponential growth phase for biofuel production.

Published in:

Plant Biotechnology Journal, 2017, v. 15, n. 4, p. 497, doi. 10.1111/pbi.12648

By:

Yao, Lina;
Shen, Hui;
Wang, Nan;
Tatlay, Jaspaul;
Li, Liang;
Tan, Tin Wee;
Lee, Yuan Kun

Publication type:

Article