Works by Takénaka, Akio

Results: 13

Crystal Structure of d(gcGXGAgc) with X = G: a Mutation at X is Possible to Occur in a Base-Intercalated Duplex for Multiplex Formation.

Published in:

Nucleosides, Nucleotides & Nucleic Acids, 2006, v. 25, n. 4-6, p. 693, doi. 10.1080/15257770600686543

By:

Kondo, Jiro;
Ciengshin, Tanashaya;
Juan, EllaCzarina Magat;
Sato, Yoshiteru;
Mitomi, Kenta;
Shimizu, Satoru;
Takénaka, Akio

Publication type:

Article

DNA Octaplex Formation with an I-Motif of Water-Mediated A-Quartets: Reinterpretation of the Crystal Structure of d(GCGAAAGC).

Published in:

Journal of Biochemistry, 2006, v. 140, n. 6, p. 759, doi. 10.1093/jb/mvj213

By:

Sato, Yoshiteru;
Mitomi, Kenta;
Sunami, Tomoko;
Kondo, Jiro;
Takénaka, Akio

Publication type:

Article

Crystallographic Studies on Damaged DNAs: III. N4-Methoxycytosine Can Form Both Watson-Crick Type and Wobbled Base Pairs in a B-Form Duplex1.

Published in:

Journal of Biochemistry, 2001, v. 130, n. 1, p. 9, doi. 10.1093/oxfordjournals.jbchem.a002967

By:

Hossain, M. Tofazzal;
Chatake, Toshiyuki;
Hikima, Takaaki;
Tsunoda, Masaru;
Sunami, Tomoko;
Ueno, Yoshihito;
Matsuda, Akira;
Takénaka, Akio

Publication type:

Article

Correlation between equi-partition of aminoacyl-tRNA synthetases and amino-acid biosynthesis pathways.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 6, p. 3277, doi. 10.1093/nar/gkaa013

By:

Takénaka, Akio;
Moras, Dino

Publication type:

Article

Crystal structures of a DNA octaplex with I‐motif of G‐quartets and its splitting into two quadruplexes suggest a folding mechanism of eight tandem repeats.

Published in:

Nucleic Acids Research, 2004, v. 32, n. 8, p. 2541, doi. 10.1093/nar/gkh575

By:

Kondo, Jiro;
Adachi, Wataru;
Umeda, Shun‐ichi;
Sunami, Tomoko;
Takénaka, Akio

Publication type:

Article

Crystal structure of d(GCGAAAGCT) containing a parallel‐stranded duplex with homo base pairs and an anti‐parallel duplex with Watson–Crick base pairs.

Published in:

Nucleic Acids Research, 2002, v. 30, n. 23, p. 5253, doi. 10.1093/nar/gkf639

By:

Sunami, Tomoko;
Kondo, Jiro;
Kobuna, Tomonori;
Hirao, Ichiro;
Watanabe, Kimitsuna;
Miura, Kin‐ichiro;
Takénaka, Akio

Publication type:

Article

Crystallographic studies on damaged DNAs IV. N4-methoxycytosine shows a second face for Watson–Crick base-pairing, leading to purine transition mutagenesis.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 19, p. 3949, doi. 10.1093/nar/29.19.3949

By:

Hossain, M. Tofazzal;
Sunami, Tomoko;
Tsunoda, Masaru;
Hikima, Takaaki;
Chatake, Toshiyuki;
Ueno, Yoshihito;
Matsuda, Akira;
Takénaka, Akio

Publication type:

Article

Insights into the Structures of DNA Damaged by Hydroxyl Radical: Crystal Structures of DNA Duplexes Containing 5-Formyluracil.

Published in:

Journal of Nucleic Acids, 2010, p. 1, doi. 10.4061/2010/107289

By:

Tsunoda, Masaru;
Sakaue, Takeshi;
Naito, Satoko;
Sunami, Tomoko;
Abe, Naoko;
Ueno, Yoshihito;
Matsuda, Akira;
Takénaka, Akio

Publication type:

Article

The Characteristic Structure of Anti-HIV Actinohivin in Complex with Three HMTG D1 Chains of HIV-gp120.

Published in:

ChemBioChem, 2014, v. 15, n. 18, p. 2766, doi. 10.1002/cbic.201402352

By:

Zhang, Fang;
Hoque, Mominul M.;
Jiang, Jiandong;
Suzuki, Kaoru;
Tsunoda, Masaru;
Takeda, Yoichi;
Ito, Yukishige;
Kawai, Gota;
Tanaka, Haruo;
Takénaka, Akio

Publication type:

Article

Structural insights into the catalytic reaction trigger and inhibition of D-3-hydroxybutyrate dehydrogenase.

Published in:

Acta Crystallographica: Section F, Structural Biology Communications, 2016, v. 72, n. 7, p. 507, doi. 10.1107/S2053230X16007767

By:

Hiroki Kanazawa;
Hoque, Md Mominul;
Masaru Tsunoda;
Kaoru Suzuki;
Tamotsu Yamamoto;
Gota Kawai;
Jiro Kondo;
Akio Takénaka

Publication type:

Article

Structures of DNA duplexes containing O6-carboxymethylguanine, a lesion associated with gastrointestinal cancer, reveal a mechanism for inducing pyrimidine transition mutations.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 10, p. 5524, doi. 10.1093/nar/gkt198

By:

Zhang, Fang;
Tsunoda, Masaru;
Suzuki, Kaoru;
Kikuchi, Yuji;
Wilkinson, Oliver;
Millington, Christopher L.;
Margison, Geoffrey P.;
Williams, David M.;
Czarina Morishita, Ella;
Takénaka, Akio

Publication type:

Article

Insights into the DNA stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido [2,3-d]pyrimidin-2-one.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 19, p. 6737, doi. 10.1093/nar/gkq519

By:

Magat Juan, Ella Czarina;
Shimizu, Satoru;
Ma, Xiao;
Kurose, Taizo;
Haraguchi, Tsuyoshi;
Zhang, Fang;
Tsunoda, Masaru;
Ohkubo, Akihiro;
Sekine, Mitsuo;
Shibata, Takayuki;
Millington, Christopher L.;
Williams, David M.;
Takénaka, Akio

Publication type:

Article

Crystal structures of DNA:DNA and DNA:RNA duplexes containing 5-(N-aminohexyl)carbamoyl-modified uracils reveal the basis for properties as antigene and antisense molecules.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1969, doi. 10.1093/nar/gkl821

By:

Juan, Ella Czarina Magat;
Kondo, Jiro;
Kurihara, Takeshi;
Ito, Takanori;
Ueno, Yoshihito;
Matsuda, Akira;
Takénaka, Akio

Publication type:

Article