Found: 32
Select item for more details and to access through your institution.
Multiple independent analyses reveal only transcription factors as an enriched functional class associated with microRNAs.
- Published in:
- BMC Systems Biology, 2012, v. 6, n. 1, p. 90, doi. 10.1186/1752-0509-6-90
- By:
- Publication type:
- Article
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets.
- Published in:
- Nucleic Acids Research, 2019, v. 47, n. D1, p. D607, doi. 10.1093/nar/gky1131
- By:
- Publication type:
- Article
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses.
- Published in:
- Nucleic Acids Research, 2019, v. 47, n. D1, p. D309, doi. 10.1093/nar/gky1085
- By:
- Publication type:
- Article
The STRING database in 2017: quality-controlled protein--protein association networks, made broadly accessible.
- Published in:
- Nucleic Acids Research, 2017, v. 45, n. D1, p. D362, doi. 10.1093/nar/gkw937
- By:
- Publication type:
- Article
STITCH 5: augmenting protein-chemical interaction networks with tissue and affinity data.
- Published in:
- Nucleic Acids Research, 2016, v. 44, n. 1, p. D380, doi. 10.1093/nar/gkv1277
- By:
- Publication type:
- Article
WeGET: predicting new genes for molecular systems by weighted co-expression.
- Published in:
- Nucleic Acids Research, 2016, v. 44, n. 1, p. D567, doi. 10.1093/nar/gkv1228
- By:
- Publication type:
- Article
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences.
- Published in:
- Nucleic Acids Research, 2016, v. 44, n. 1, p. D286, doi. 10.1093/nar/gkv1248
- By:
- Publication type:
- Article
STRING v10: protein–protein interaction networks, integrated over the tree of life.
- Published in:
- Nucleic Acids Research, 2015, v. 43, n. D1, p. D447, doi. 10.1093/nar/gku1003
- By:
- Publication type:
- Article
STITCH 4: integration of protein–chemical interactions with user data.
- Published in:
- Nucleic Acids Research, 2014, v. 42, n. D1, p. D401, doi. 10.1093/nar/gkt1207
- By:
- Publication type:
- Article
eggNOG v4.0: nested orthology inference across 3686 organisms.
- Published in:
- Nucleic Acids Research, 2014, v. 42, n. D1, p. D231, doi. 10.1093/nar/gkt1253
- By:
- Publication type:
- Article
STRING v9.1: protein-protein interaction networks, with increased coverage and integration.
- Published in:
- Nucleic Acids Research, 2013, v. 41, p. D808, doi. 10.1093/nar/gks1094
- By:
- Publication type:
- Article
STITCH 3: zooming in on protein–chemical interactions.
- Published in:
- Nucleic Acids Research, 2012, p. D876, doi. 10.1093/nar/gkr1011
- By:
- Publication type:
- Article
eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges.
- Published in:
- Nucleic Acids Research, 2012, p. D284, doi. 10.1093/nar/gkr1060
- By:
- Publication type:
- Article
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored.
- Published in:
- Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D561, doi. 10.1093/nar/gkq973
- By:
- Publication type:
- Article
STITCH 2: an interaction network database for small molecules and proteins.
- Published in:
- Nucleic Acids Research, 2010, v. 38, p. D552, doi. 10.1093/nar/gkp937
- By:
- Publication type:
- Article
GUNC: detection of chimerism and contamination in prokaryotic genomes.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02393-0
- By:
- Publication type:
- Article
Version 4.0 of PaxDb: Protein abundance data, integrated across model organisms, tissues, and cell-lines.
- Published in:
- Proteomics, 2015, v. 15, n. 18, p. 3163, doi. 10.1002/pmic.201400441
- By:
- Publication type:
- Article
Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper.
- Published in:
- Molecular Biology & Evolution, 2017, v. 34, n. 8, p. 2115, doi. 10.1093/molbev/msx148
- By:
- Publication type:
- Article
“Orphan” Retrogenes in the Human Genome.
- Published in:
- Molecular Biology & Evolution, 2013, v. 30, n. 2, p. 384, doi. 10.1093/molbev/mss235
- By:
- Publication type:
- Article
Tree reconciliation combined with subsampling improves large scale inference of orthologous group hierarchies.
- Published in:
- BMC Bioinformatics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12859-019-2828-z
- By:
- Publication type:
- Article
Systematic assessment of pathway databases, based on a diverse collection of user-submitted experiments.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 5, p. 1, doi. 10.1093/bib/bbac355
- By:
- Publication type:
- Article
Viruses.STRING: A Virus-Host Protein-Protein Interaction Database.
- Published in:
- Viruses (1999-4915), 2018, v. 10, n. 10, p. 519, doi. 10.3390/v10100519
- By:
- Publication type:
- Article
Pathogenic impact of transcript isoform switching in 1,209 cancer samples covering 27 cancer types using an isoform-specific interaction network.
- Published in:
- Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-71221-5
- By:
- Publication type:
- Article
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse.
- Published in:
- Nature, 2013, v. 499, n. 7456, p. 74, doi. 10.1038/nature12323
- By:
- Publication type:
- Article
proGenomes3: approaching one million accurately and consistently annotated high-quality prokaryotic genomes.
- Published in:
- Nucleic Acids Research, 2023, v. 51, n. D1, p. D760, doi. 10.1093/nar/gkac1078
- By:
- Publication type:
- Article
eggNOG 6.0: enabling comparative genomics across 12 535 organisms.
- Published in:
- Nucleic Acids Research, 2023, v. 51, n. D1, p. D389, doi. 10.1093/nar/gkac1022
- By:
- Publication type:
- Article
STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest.
- Published in:
- Nucleic Acids Research, 2023, v. 51, n. D1, p. D638, doi. 10.1093/nar/gkac1000
- By:
- Publication type:
- Article
Correction to 'The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets'.
- Published in:
- 2021
- By:
- Publication type:
- Correction Notice
The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. D1, p. D605, doi. 10.1093/nar/gkaa1074
- By:
- Publication type:
- Article
The Quest for Orthologs benchmark service and consensus calls in 2020.
- Published in:
- Nucleic Acids Research, 2020, v. 48, n. W1, p. W538, doi. 10.1093/nar/gkaa308
- By:
- Publication type:
- Article
CanIsoNet: a database to study the functional impact of isoform switching events in diseases.
- Published in:
- Bioinformatics Advances, 2023, v. 3, n. 1, p. 1, doi. 10.1093/bioadv/vbad050
- By:
- Publication type:
- Article
Enhancing coevolutionary signals in protein–protein interaction prediction through clade-wise alignment integration.
- Published in:
- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-55655-9
- By:
- Publication type:
- Article