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Beyond linearity, stability, and equilibrium: The edm package for empirical dynamic modeling and convergent cross-mapping in Stata.
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- Stata Journal, 2021, v. 21, n. 1, p. 220, doi. 10.1177/1536867X211000030
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- Article
Networks of Causal Linkage Between Eigenmodes Characterize Behavioral Dynamics of Caenorhabditis elegans.
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- PLoS Computational Biology, 2021, v. 17, n. 9, p. 1, doi. 10.1371/journal.pcbi.1009329
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- Article
Nonlinear dynamics and noise in fisheries recruitment: A global meta‐analysis.
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- Fish & Fisheries, 2018, v. 19, n. 6, p. 964, doi. 10.1111/faf.12304
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- Article
Ecosystem‐based forecasts of recruitment in two menhaden species.
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- Fish & Fisheries, 2018, v. 19, n. 5, p. 769, doi. 10.1111/faf.12287
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- Publication type:
- Article
Complex dynamics may limit prediction in marine fisheries.
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- Fish & Fisheries, 2014, v. 15, n. 4, p. 616, doi. 10.1111/faf.12037
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- Article
Dynamics of Florida milk production and total phosphate in Lake Okeechobee.
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- PLoS ONE, 2021, v. 16, n. 8, p. 1, doi. 10.1371/journal.pone.0248910
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- Article
Empirical mode modeling: A data-driven approach to recover and forecast nonlinear dynamics from noisy data.
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- Nonlinear Dynamics, 2022, v. 108, n. 3, p. 2147, doi. 10.1007/s11071-022-07311-y
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- Article
MODELING THE BIOLOGICAL CONTROL OF AN ALIEN PREDATOR TO PROTECT ISLAND SPECIES FROM EXTINCTION.
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- Ecological Applications, 1999, v. 9, n. 1, p. 112, doi. 10.1890/1051-0761(1999)009[0112:MTBCOA]2.0.CO;2
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- Article
Predicting coastal algal blooms in southern California.
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- Ecology, 2017, v. 98, n. 5, p. 1419, doi. 10.1002/ecy.1804
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- Article
Spatial convergent cross mapping to detect causal relationships from short time series.
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- Ecology, 2015, v. 96, n. 5, p. 1174, doi. 10.1890/14-1479.1
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- Article
Nonparametric forecasting outperforms parametric methods for a simulated multispecies system.
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- Ecology, 2013, v. 94, n. 4, p. 794, doi. 10.1890/12-0904.1
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- Article
Rabbits killing birds: modelling the hyperpredation process.
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- Journal of Animal Ecology, 2000, v. 69, n. 1, p. 154, doi. 10.1046/j.1365-2656.2000.00383.x
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- Article
Cats protecting birds: modelling the mesopredator release effect.
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- Journal of Animal Ecology, 1999, v. 68, n. 2, p. 282, doi. 10.1046/j.1365-2656.1999.00285.x
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- Publication type:
- Article
Tracking changes in behavioural dynamics using prediction error.
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- PLoS ONE, 2021, v. 16, n. 5, p. 1, doi. 10.1371/journal.pone.0251053
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- Article
The importance of making testable predictions: A cautionary tale.
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- PLoS ONE, 2020, v. 15, n. 12, p. 1, doi. 10.1371/journal.pone.0236541
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- Publication type:
- Article
Detecting and forecasting complex nonlinear dynamics in spatially structured catch-per-unit-effort time series for North Pacific albacore (Thunnus alalunga).
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- Canadian Journal of Fisheries & Aquatic Sciences, 2011, v. 68, n. 3, p. 400
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- Article
Spatial analysis shows that fishing enhances the climatic sensitivity of marine fishes.
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- Canadian Journal of Fisheries & Aquatic Sciences, 2008, v. 65, n. 5, p. 947, doi. 10.1139/F08-017
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- Article
Early-warning signals for critical transitions.
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- Nature, 2009, v. 461, n. 7260, p. 53, doi. 10.1038/nature08227
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- Article
From out of the blue.
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- Nature, 1995, v. 378, n. 6557, p. 559, doi. 10.1038/378559a0
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- Article
Generalized Theorems for Nonlinear State Space Reconstruction.
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- PLoS ONE, 2011, v. 6, n. 3, p. 1, doi. 10.1371/journal.pone.0018295
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- Article
A nonlinear, low data requirement model for producing spatially explicit fishery forecasts.
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- Fisheries Oceanography, 2014, v. 23, n. 1, p. 45, doi. 10.1111/fog.12042
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- Article
Causal inference from cross-sectional earth system data with geographical convergent cross mapping.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-41619-6
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- Article
Author Correction: Causal inference from cross-sectional earth system data with geographical convergent cross mapping.
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- 2023
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- Correction Notice
Causal inference from cross-sectional earth system data with geographical convergent cross mapping.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-41619-6
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- Publication type:
- Article
Relationships of temperature and biodiversity with stability of natural aquatic food webs.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38977-6
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- Article
Causal factors contributing to global sea level change on different timescales.
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- Geophysical Research Abstracts, 2018, v. 20, p. 8999
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- Article
Synchronization and causality across time scales in El Niño Southern Oscillation.
- Published in:
- NPJ Climate & Atmospheric Science, 2018, v. 1, n. 1, p. N.PAG, doi. 10.1038/s41612-018-0043-7
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- Article
Long‐term warming destabilizes aquatic ecosystems through weakening biodiversity‐mediated causal networks.
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- Global Change Biology, 2020, v. 26, n. 11, p. 6413, doi. 10.1111/gcb.15323
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- Article
Climate-driven changes in abundance and distribution of larvae of oceanic fishes in the southern California region.
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- Global Change Biology, 2009, v. 15, n. 9, p. 2137, doi. 10.1111/j.1365-2486.2009.01875.x
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- Article
Ranking species based on sensitivity to perturbations under non‐equilibrium community dynamics.
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- Ecology Letters, 2023, v. 26, n. 1, p. 170, doi. 10.1111/ele.14131
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- Article
Susceptible host availability modulates climate effects on dengue dynamics.
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- Ecology Letters, 2021, v. 24, n. 3, p. 415, doi. 10.1111/ele.13652
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- Article
Recent developments in empirical dynamic modelling.
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- Methods in Ecology & Evolution, 2023, v. 14, n. 3, p. 732, doi. 10.1111/2041-210X.13983
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- Article
Regularized S‐map for inference and forecasting with noisy ecological time series.
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- Methods in Ecology & Evolution, 2019, v. 10, n. 5, p. 650, doi. 10.1111/2041-210X.13150
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- Article
Control of complex systems with generalized embedding and empirical dynamic modeling.
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- PLoS ONE, 2024, v. 19, n. 8, p. 1, doi. 10.1371/journal.pone.0305408
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- Article
Complex systems: Cooperative network dynamics.
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- Nature, 2009, v. 458, n. 7241, p. 979, doi. 10.1038/458979a
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- Article
Why fishing magnifies fluctuations in fish abundance.
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- Nature, 2008, v. 452, n. 7189, p. 835, doi. 10.1038/nature06851
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- Article
Complex systems: Ecology for bankers.
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- Nature, 2008, v. 451, n. 7181, p. 893, doi. 10.1038/451893a
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- Article
Fishing elevates variability in the abundance of exploited species.
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- 2006
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- Publication type:
- Letter
Distinguishing random environmental fluctuations from ecological catastrophes for the North Pacific Ocean.
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- Nature, 2005, v. 435, n. 7040, p. 336, doi. 10.1038/nature03553
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- Article
Frequently asked questions about nonlinear dynamics and empirical dynamic modelling.
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- ICES Journal of Marine Science / Journal du Conseil, 2020, v. 77, n. 4, p. 1463, doi. 10.1093/icesjms/fsz209
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- Publication type:
- Article
Non-linearity in stock–recruitment relationships of Atlantic cod: insights from a multi-model approach.
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- ICES Journal of Marine Science / Journal du Conseil, 2020, v. 77, n. 4, p. 1492, doi. 10.1093/icesjms/fsz113
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- Publication type:
- Article
Circularity in fisheries data weakens real world prediction.
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- Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-63773-3
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- Article
Disruption of ecological networks in lakes by climate change and nutrient fluctuations.
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- Nature Climate Change, 2023, v. 13, n. 4, p. 389, doi. 10.1038/s41558-023-01615-6
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- Article
Causal feedbacks in climate change.
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- Nature Climate Change, 2015, v. 5, n. 5, p. 445, doi. 10.1038/nclimate2568
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- Article
Peeling apart nature.
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- Nature, 1983, v. 304, n. 5921, p. 94, doi. 10.1038/304094a0
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- Article
Distinguishing time-delayed causal interactions using convergent cross mapping.
- Published in:
- Scientific Reports, 2015, p. 1, doi. 10.1038/srep14750
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- Publication type:
- Article
Inferring causation from time series in Earth system sciences.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-10105-3
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- Publication type:
- Article
Inter-outbreak stability reflects the size of the susceptible pool and forecasts magnitudes of seasonal epidemics.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-10099-y
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- Publication type:
- Article
Environmental variability and fishing effects on the Pacific sardine fisheries in the Gulf of California.
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- Canadian Journal of Fisheries & Aquatic Sciences, 2021, v. 78, n. 5, p. 623, doi. 10.1139/cjfas-2020-0010
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- Publication type:
- Article