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The effect of low-abundance OTU filtering methods on the reliability and variability of microbial composition assessed by 16S rRNA amplicon sequencing.
- Published in:
- Frontiers in Cellular & Infection Microbiology, 2024, p. 1, doi. 10.3389/fcimb.2023.1165295
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- Article
Investigating the influence of perinatal fluoxetine exposure on murine gut microbial communities during pregnancy and lactation.
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- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-62224-7
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- Article
The Canine Gut Health: The Impact of a New Feed Supplement on Microbiota Composition.
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- Animals (2076-2615), 2024, v. 14, n. 8, p. 1189, doi. 10.3390/ani14081189
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- Article
Comparison of ruminal microbiota, IL-1β gene variation, and tick incidence between Holstein × Gyr and Holstein heifers in grazing system.
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- Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1132151
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- Article
Neighborhood socioeconomic status is associated with low diversity gut microbiomes and multi-drug resistant microorganism colonization.
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- NPJ Biofilms & Microbiomes, 2023, v. 9, n. 1, p. 1, doi. 10.1038/s41522-023-00430-3
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- Publication type:
- Article
The effect of low-abundance OTU filtering methods on the reliability and variability of microbial composition assessed by 16S rRNA amplicon sequencing.
- Published in:
- Frontiers in Cellular & Infection Microbiology, 2023, p. 1, doi. 10.3389/fcimb.2023.1165295
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- Publication type:
- Article
Inhibition of Listeria monocytogenes by Broth Cultures of Surface Microbiota of Wooden Boards Used in Cheese Ripening.
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- Applied Sciences (2076-3417), 2023, v. 13, n. 10, p. 5872, doi. 10.3390/app13105872
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- Article
Behavioral and Physiological Alterations in Angus Steers Grazing Endophyte-Infected Toxic Fescue during Late Fall.
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- Toxins, 2023, v. 15, n. 5, p. 343, doi. 10.3390/toxins15050343
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- Article
A quality improvement study on the relationship between intranasal povidone-iodine and anesthesia and the nasal microbiota of surgery patients.
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- PLoS ONE, 2022, v. 17, n. 12, p. 1, doi. 10.1371/journal.pone.0278699
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- Article
Incidence and Treatments of Bovine Mastitis and Other Diseases on 37 Dairy Farms in Wisconsin.
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- Pathogens, 2022, v. 11, n. 11, p. 1282, doi. 10.3390/pathogens11111282
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- Article
Assessing the relationship between physical activity and the gut microbiome in a large, population-based sample of Wisconsin adults.
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- PLoS ONE, 2022, v. 17, n. 10, p. 1, doi. 10.1371/journal.pone.0276684
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- Article
Examining the association between the gastrointestinal microbiota and Gulf War illness: A prospective cohort study.
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- PLoS ONE, 2022, v. 17, n. 7, p. 1, doi. 10.1371/journal.pone.0268479
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- Article
Integrative interactomics applied to bovine fescue toxicosis.
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- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-08540-2
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- Article
Assessing the impact of storage time on the stability of stool microbiota richness, diversity, and composition.
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- Gut Pathogens, 2021, v. 13, n. 1, p. 1, doi. 10.1186/s13099-021-00470-0
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- Article
Wisconsin dairy farm worker perceptions and practices related to antibiotic use, resistance, and infection prevention using a systems engineering framework.
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- PLoS ONE, 2021, v. 16, n. 12, p. 1, doi. 10.1371/journal.pone.0258290
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- Article
The genomic basis of army ant chemosensory adaptations.
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- Molecular Ecology, 2021, v. 30, n. 24, p. 6627, doi. 10.1111/mec.16198
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- Article
Assessing the microbiota of recycled bedding sand on a Wisconsin dairy farm.
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- Journal of Animal Science & Biotechnology, 2021, v. 12, n. 1, p. 1, doi. 10.1186/s40104-021-00635-6
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- Article
Assessing the relationship between the rumen microbiota and feed efficiency in Nellore steers.
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- Journal of Animal Science & Biotechnology, 2021, v. 12, n. 1, p. 1, doi. 10.1186/s40104-021-00599-7
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- Article
Assessing the relationship between the rumen microbiota and feed efficiency in Nellore steers.
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- Journal of Animal Science & Biotechnology, 2021, v. 12, n. 1, p. 1, doi. 10.1186/s40104-021-00599-7
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- Article
Assessing the Response of Ruminal Bacterial and Fungal Microbiota to Whole-Rumen Contents Exchange in Dairy Cows.
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- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.665776
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- Article
Publisher Correction: A Sarcina bacterium linked to lethal disease in sanctuary chimpanzees in Sierra Leone.
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- 2021
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- Correction Notice
The Rumen Bacterial Community in Dairy Cows Is Correlated to Production Traits During Freshening Period.
- Published in:
- Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.630605
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- Article
A Sarcina bacterium linked to lethal disease in sanctuary chimpanzees in Sierra Leone.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21012-x
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- Article
Editorial: Gut Microbiome Modulation in Ruminants: Enhancing Advantages and Minimizing Drawbacks.
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- 2021
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- Editorial
Assessing the Beneficial Effects of the Immunomodulatory Glycan LNFPIII on Gut Microbiota and Health in a Mouse Model of Gulf War Illness.
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- International Journal of Environmental Research & Public Health, 2020, v. 17, n. 19, p. 7081, doi. 10.3390/ijerph17197081
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- Article
Ruminal Fermentation Pattern, Bacterial Community Composition, and Nutrient Digestibility of Nellore Cattle Submitted to Either Nutritional Restriction or Intake of Concentrate Feedstuffs Prior to Adaptation Period.
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- Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.01865
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- Article
Household Pet Ownership and the Microbial Diversity of the Human Gut Microbiota.
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- Frontiers in Cellular & Infection Microbiology, 2020, v. 10, p. 1, doi. 10.3389/fcimb.2020.00073
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- Article
Toxic tall fescue grazing increases susceptibility of the Angus steer fecal microbiota and plasma/urine metabolome to environmental effects.
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- Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-59104-1
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- Article
Characterization of microbial communities in ethanol biorefineries.
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- Journal of Industrial Microbiology & Biotechnology, 2020, v. 47, n. 2, p. 183, doi. 10.1007/s10295-019-02254-7
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- Article
2582. The Association Between Dietary Fiber and Diet and Gut Colonization with Clostridium difficile.
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- Open Forum Infectious Diseases, 2019, v. 6, p. S897, doi. 10.1093/ofid/ofz360.2260
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- Article
The ruminal bacterial community in lactating dairy cows has limited variation on a day-to-day basis.
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- Journal of Animal Science & Biotechnology, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1186/s40104-019-0375-0
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- Article
Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation.
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- Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1760-x
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- Article
Feeding modes shape the acquisition and structure of the initial gut microbiota in newborn lambs.
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- Environmental Microbiology, 2019, v. 21, n. 7, p. 2333, doi. 10.1111/1462-2920.14614
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- Article
The Bacterial and Fungal Microbiota of Nelore Steers Is Dynamic Across the Gastrointestinal Tract and Its Fecal-Associated Microbiota Is Correlated to Feed Efficiency.
- Published in:
- Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2019.01263
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- Article
Author Correction: Transcriptomics analysis of host liver and meta-transcriptome analysis of rumen epimural microbial community in young calves treated with artificial dosing of rumen content from adult donor cow.
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- 2019
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- Publication type:
- Correction Notice
Transcriptomics analysis of host liver and meta-transcriptome analysis of rumen epimural microbial community in young calves treated with artificial dosing of rumen content from adult donor cow.
- Published in:
- Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-018-37033-4
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- Article
Bacterial Communities in the Alpaca Gastrointestinal Tract Vary With Diet and Body Site.
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- Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2018.03334
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- Article
Compositional and structural dynamics of the ruminal microbiota in dairy heifers and its relationship to methane production.
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- Journal of the Science of Food & Agriculture, 2019, v. 99, n. 1, p. 210, doi. 10.1002/jsfa.9162
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- Article
A global analysis of gene expression in Fibrobacter succinogenes S85 grown on cellulose and soluble sugars at different growth rates.
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- Biotechnology for Biofuels, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13068-018-1290-x
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- Article
The Ruminococci: key symbionts of the gut ecosystem.
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- Journal of Microbiology, 2018, v. 56, n. 3, p. 199, doi. 10.1007/s12275-018-8024-4
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- Article
Camelina Seed Supplementation at Two Dietary Fat Levels Change Ruminal Bacterial Community Composition in a Dual-Flow Continuous Culture System.
- Published in:
- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.02147
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- Article
Fibrobacter communities in the gastrointestinal tracts of diverse hindgut-fermenting herbivores are distinct from those of the rumen.
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- Environmental Microbiology, 2017, v. 19, n. 9, p. 3768, doi. 10.1111/1462-2920.13878
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- Publication type:
- Article
Effect of Pre-weaning Diet on the Ruminal Archaeal, Bacterial, and Fungal Communities of Dairy Calves.
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- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01553
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- Article
Microbial succession in the gastrointestinal tract of dairy cows from 2 weeks to first lactation.
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- Scientific Reports, 2017, p. 40864, doi. 10.1038/srep40864
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- Article
The human laryngeal microbiome: effects of cigarette smoke and reflux.
- Published in:
- Scientific Reports, 2016, p. 35882, doi. 10.1038/srep35882
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- Article
Dietary Shifts May Trigger Dysbiosis and Mucous Stools in Giant Pandas (Ailuropoda melanoleuca).
- Published in:
- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00661
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- Article
Diet specialization selects for an unusual and simplified gut microbiota in two- and three-toed sloths.
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- Environmental Microbiology, 2016, v. 18, n. 5, p. 1391, doi. 10.1111/1462-2920.13022
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- Article
A Phylogenomic Analysis of the Bacterial Phylum Fibrobacteres.
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- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2015.01469
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- Article
Evaluating Models of Cellulose Degradation by Fibrobacter succinogenes S85.
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- PLoS ONE, 2015, v. 10, n. 12, p. 1, doi. 10.1371/journal.pone.0143809
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- Article
Phylogenetic and amino acid conservation analyses of bacterial l-aspartate-α-decarboxylase and of its zymogen-maturation protein reveal a putative interaction domain.
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- BMC Research Notes, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13104-015-1314-6
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- Article