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Identification and Candidate Gene Evaluation of a Large Fast Neutron-Induced Deletion Associated with a High-Oil Phenotype in Soybean Seeds.
- Published in:
- Genes, 2024, v. 15, n. 7, p. 892, doi. 10.3390/genes15070892
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- Article
Bowman–Birk Inhibitor Mutants of Soybean Generated by CRISPR-Cas9 Reveal Drastic Reductions in Trypsin and Chymotrypsin Inhibitor Activities.
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- International Journal of Molecular Sciences, 2024, v. 25, n. 11, p. 5578, doi. 10.3390/ijms25115578
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- Article
Variation in shoot architecture traits and their relationship to canopy coverage and light interception in soybean (Glycine max).
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- BMC Plant Biology, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12870-024-04859-2
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- Article
A genome‐wide analysis of the USDA Soybean Isoline Collection.
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- Plant Genome, 2023, v. 16, n. 2, p. 1, doi. 10.1002/tpg2.20310
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- Article
Branch angle and leaflet shape are associated with canopy coverage in soybean.
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- Plant Genome, 2023, v. 16, n. 2, p. 1, doi. 10.1002/tpg2.20304
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- Article
A chromosome 16 deletion conferring a high sucrose phenotype in soybean.
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- Theoretical & Applied Genetics, 2023, v. 136, n. 5, p. 1, doi. 10.1007/s00122-023-04354-6
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- Article
Genetic architecture of protein and oil content in soybean seed and meal.
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- Plant Genome, 2023, v. 16, n. 1, p. 1, doi. 10.1002/tpg2.20308
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- Article
Fast neutron mutagenesis in soybean enriches for small indels and creates frameshift mutations.
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- G3: Genes | Genomes | Genetics, 2022, v. 12, n. 2, p. 1, doi. 10.1093/g3journal/jkab431
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- Article
Iron deficiency in soybean.
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- Crop Science, 2022, v. 62, n. 1, p. 36, doi. 10.1002/csc2.20661
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- Article
Mining Fiskeby III and Mandarin (Ottawa) Expression Profiles to Understand Iron Stress Tolerant Responses in Soybean.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 20, p. 11032, doi. 10.3390/ijms222011032
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- Article
Dissecting nematode resistance regions in soybean revealed pleiotropic effect of soybean cyst and reniform nematode resistance genes.
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- Plant Genome, 2021, v. 14, n. 2, p. 1, doi. 10.1002/tpg2.20083
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- Article
Development of mPing‐based activation tags for crop insertional mutagenesis.
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- Plant Direct, 2021, v. 5, n. 1, p. 1, doi. 10.1002/pld3.300
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- Article
Plant Genome Editing and the Relevance of Off-Target Changes.
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- Plant Physiology, 2020, v. 183, n. 4, p. 1453, doi. 10.1104/pp.19.01194
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- Article
Similar Seed Composition Phenotypes Are Observed From CRISPR-Generated In-Frame and Knockout Alleles of a Soybean KASI Ortholog.
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- Frontiers in Plant Science, 2020, v. 11, p. 1, doi. 10.3389/fpls.2020.01005
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- Article
Identification of nodulation‐related genes in Medicago truncatula using genome‐wide association studies and co‐expression networks.
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- Plant Direct, 2020, v. 4, n. 5, p. 1, doi. 10.1002/pld3.220
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- Article
Characterization of genetic heterogeneity within accessions in the USDA soybean germplasm collection.
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- Plant Genome, 2020, v. 13, n. 1, p. 1, doi. 10.1002/tpg2.20000
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- Article
Integration, abundance, and transmission of mutations and transgenes in a series of CRISPR/Cas9 soybean lines.
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- BMC Biotechnology, 2020, v. 20, n. 1, p. 1, doi. 10.1186/s12896-020-00604-3
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- Article
Domestication in Real Time: The Curious Case of a Trigenomic Sunflower Population.
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- Agronomy, 2019, v. 9, n. 11, p. 704, doi. 10.3390/agronomy9110704
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- Article
Identification and characterization of a fast-neutron-induced mutant with elevated seed protein content in soybean.
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- Theoretical & Applied Genetics, 2019, v. 132, n. 11, p. 2965, doi. 10.1007/s00122-019-03399-w
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- Article
Functional analysis and development of a CRISPR/Cas9 allelic series for a CPR5 ortholog necessary for proper growth of soybean trichomes.
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- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-51240-7
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- Article
Genomic changes and biochemical alterations of seed protein and oil content in a subset of fast neutron induced soybean mutants.
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- BMC Plant Biology, 2019, v. 19, n. 1, p. N.PAG, doi. 10.1186/s12870-019-1981-x
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- Article
Screening populations for copy number variation using genotyping-by-sequencing: a proof of concept using soybean fast neutron mutants.
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- BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-5998-1
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- Article
Whole‐genome re‐sequencing reveals the impact of the interaction of copy number variants of the rhg1 and Rhg4 genes on broad‐based resistance to soybean cyst nematode.
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- Plant Biotechnology Journal, 2019, v. 17, n. 8, p. 1595, doi. 10.1111/pbi.13086
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- Article
Genetic Architecture of Soybean Yield and Agronomic Traits.
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- G3: Genes | Genomes | Genetics, 2018, v. 8, n. 10, p. 3367, doi. 10.1534/g3.118.200332
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- Article
Neo-Domestication of an Interspecific Tetraploid Helianthus annuus × Helianthus tuberous Population That Segregates for Perennial Habit.
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- Genes, 2018, v. 9, n. 9, p. 422, doi. 10.3390/genes9090422
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- Article
The importance of genotype identity, genetic heterogeneity, and bioinformatic handling for properly assessing genomic variation in transgenic plants.
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- BMC Biotechnology, 2018, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12896-018-0447-9
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- Article
CRISPR/Cas9 and TALENs generate heritable mutations for genes involved in small RNA processing of Glycine max and Medicago truncatula.
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- Plant Biotechnology Journal, 2018, v. 16, n. 6, p. 1125, doi. 10.1111/pbi.12857
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- Article
Transcriptomic basis of genome by genome variation in a legume-rhizobia mutualism.
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- Molecular Ecology, 2017, v. 26, n. 21, p. 6122, doi. 10.1111/mec.14285
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- Article
Strategies for optimizing BioNano and Dovetail explored through a second reference quality assembly for the legume model, Medicago truncatula.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3971-4
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- Article
Hybrid assembly with long and short reads improves discovery of gene family expansions.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3927-8
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- Article
An Induced Chromosomal Translocation in Soybean Disrupts a KASI Ortholog and Is Associated with a High-Sucrose and Low-Oil Seed Phenotype.
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- G3: Genes | Genomes | Genetics, 2017, v. 7, n. 4, p. 1215, doi. 10.1534/g3.116.038596
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- Article
Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3654-1
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- Article
Validating Genome-Wide Association Candidates Controlling Quantitative Variation in Nodulation.
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- Plant Physiology, 2017, v. 173, n. 2, p. 921, doi. 10.1104/pp.16.01923
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- Article
The Role of Deleterious Substitutions in Crop Genomes.
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- Molecular Biology & Evolution, 2016, v. 33, n. 9, p. 2307, doi. 10.1093/molbev/msw102
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- Article
Genomic variation and DNA repair associated with soybean transgenesis: a comparison to cultivars and mutagenized plants.
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- BMC Biotechnology, 2016, v. 16, p. 1, doi. 10.1186/s12896-016-0271-z
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- Article
Environmental Association Analyses Identify Candidates for Abiotic Stress Tolerance in Glycine soja, the Wild Progenitor of Cultivated Soybeans.
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- G3: Genes | Genomes | Genetics, 2016, v. 6, n. 4, p. 835, doi. 10.1534/g3.116.026914
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- Article
MicroRNA Maturation and MicroRNA Target Gene Expression Regulation Are Severely Disrupted in Soybean dicer-like1 Double Mutants.
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- G3: Genes | Genomes | Genetics, 2016, v. 6, n. 2, p. 423, doi. 10.1534/g3.115.022137
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- Article
Modification of centromere structure: a promising approach for haploid line production in plant breeding.
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- Turkish Journal of Agriculture & Forestry, 2015, v. 39, n. 4, p. 557, doi. 10.3906/tar-1405-137
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- Article
Genome Resilience and Prevalence of Segmental Duplications Following Fast Neutron Irradiation of Soybean.
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- Genetics, 2014, v. 198, n. 3, p. 967, doi. 10.1534/genetics.114.170340
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- Article
The Reflective Plant Breeding Paradigm: A Robust System of Germplasm Development to Support Strategic Diversification of Agroecosystems.
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- Crop Science, 2014, v. 54, n. 5, p. 1939, doi. 10.2135/cropsci2014.03.0195
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- Article
To the reference and beyond: understanding variation in plant genomes.
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- Briefings in Functional Genomics, 2014, v. 13, n. 4, p. 255, doi. 10.1093/bfgp/elu019
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- Article
A re-sequencing based assessment of genomic heterogeneity and fast neutron-induced deletions in a common bean cultivar.
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- Frontiers in Plant Science, 2013, v. 4, p. 1, doi. 10.3389/fpls.2013.00210
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- Article
Genomic heterogeneity and structural variation in soybean near isogenic lines.
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- Frontiers in Plant Science, 2013, v. 4, p. 1, doi. 10.3389/fpls.2013.00104
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- Article
Structural Variants in the Soybean Genome Localize to Clusters of Biotic Stress-Response Genes<sup>1[W][OA]</sup>.
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- Plant Physiology, 2012, v. 159, n. 4, p. 1295, doi. 10.1104/pp.112.194605
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- Article
Targeted Mutagenesis of Duplicated Genes in Soybean with Zinc-Finger Nucleases.
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- Plant Physiology, 2011, v. 156, n. 2, p. 466, doi. 10.1104/pp.111.172981
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- Article
Phenotypic and Genomic Analyses of a Fast Neutron Mutant Population Resource in Soybean.
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- Plant Physiology, 2011, v. 156, n. 1, p. 240, doi. 10.1104/pp.110.170811
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- Article
The Composition and Origins of Genomic Variation among Individuals of the Soybean Reference Cultivar Williams 82.
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- Plant Physiology, 2011, v. 155, n. 2, p. 645, doi. 10.1104/pp.110.166736
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- Article
Selection-free zinc-finger-nuclease engineering by context-dependent assembly (CoDA).
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- Nature Methods, 2011, v. 8, n. 1, p. 67, doi. 10.1038/nmeth.1542
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- Article
An Integrative Approach to Genomic Introgression Mapping.
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- Plant Physiology, 2010, v. 154, n. 1, p. 3, doi. 10.1104/pp.110.158949
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- Article
Structural and Functional Divergence of a 1-Mb Duplicated Region in the Soybean (Glycine max) Genome and Comparison to an Orthologous Region from Phaseolus vulgaris.
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- Plant Cell, 2010, v. 22, n. 8, p. 2545, doi. 10.1105/tpc.110.074229
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- Article