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The Impact of Paralogy on Phylogenomic Studies – A Case Study on Annelid Relationships
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- PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0062892
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- Article
Exploiting Gene Families for Phylogenomic Analysis of Myzostomid Transcriptome Data.
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- PLoS ONE, 2012, v. 7, n. 1, p. 1, doi. 10.1371/journal.pone.0029843
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- Article
Molecular phylogeny of Allodia (Diptera: Mycetophilidae) constructed using genome skimming.
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- Systematic Entomology, 2022, v. 47, n. 1, p. 267, doi. 10.1111/syen.12529
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- Article
nRCFV: a new, dataset-size-independent metric to quantify compositional heterogeneity in nucleotide and amino acid datasets.
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- BMC Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12859-023-05270-8
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- Article
Marine connectivity dynamics: clarifying cosmopolitan distributions of marine interstitial invertebrates and the meiofauna paradox.
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- Marine Biology, 2018, v. 165, n. 8, p. 1, doi. 10.1007/s00227-018-3383-2
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- Article
Removing the bad apples: A simple bioinformatic method to improve loci‐recovery in de novo RADseq data for non‐model organisms.
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- Methods in Ecology & Evolution, 2021, v. 12, n. 5, p. 805, doi. 10.1111/2041-210X.13562
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- Article
Three new species of the genus Perinereis (Annelida, Nereididae) from Egyptian coasts.
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- ZooKeys, 2022, n. 1132, p. 163, doi. 10.3897/zookeys.1132.87629
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- Article
Convergent evolution of the ladder-like ventral nerve cord in Annelida.
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- Frontiers in Zoology, 2018, v. 15, n. 1, p. N.PAG, doi. 10.1186/s12983-018-0280-y
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- Article
Phylogeny and mitochondrial gene order variation in Lophotrochozoa in the light of new mitogenomic data from Nemertea.
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- BMC Genomics, 2009, v. 10, p. 364, doi. 10.1186/1471-2164-10-364
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- Article
Platyzoan Paraphyly Based on Phylogenomic Data Supports a Noncoelomate Ancestry of Spiralia.
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- Molecular Biology & Evolution, 2014, v. 31, n. 7, p. 1833, doi. 10.1093/molbev/msu143
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- Article
Illuminating the Base of the Annelid Tree Using Transcriptomics.
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- Molecular Biology & Evolution, 2014, v. 31, n. 6, p. 1391, doi. 10.1093/molbev/msu080
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- Article
Phylogenomic analyses unravel annelid evolution.
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- Nature, 2011, v. 471, n. 7336, p. 95, doi. 10.1038/nature09864
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- Article
A brief review of holopelagic annelids.
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- Integrative & Comparative Biology, 2007, v. 47, n. 6, p. 872, doi. 10.1093/icb/icm086
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- Article
Progenetic species in polychaetes (Annelida) and problems assessing their phylogenetic affiliation.
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- Integrative & Comparative Biology, 2006, v. 46, n. 4, p. 558, doi. 10.1093/icb/icj055
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- Article
First Chromosome-Level Genome Assembly of a Ribbon Worm from the Hoplonemertea Clade, Emplectonema gracile, and Its Structural Annotation.
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- Genome Biology & Evolution, 2024, v. 16, n. 7, p. 1, doi. 10.1093/gbe/evae127
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- Article
Phylogenetic Position of Nemertea Derived from Phylogenomic Data.
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- Molecular Biology & Evolution, 2008, v. 25, n. 4, p. 728, doi. 10.1093/molbev/msn019
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- Article
Spiralian Phylogenomics Supports the Resurrection of Bryozoa Comprising Ectoprocta and Entoprocta.
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- Molecular Biology & Evolution, 2007, v. 24, n. 12, p. 2723, doi. 10.1093/molbev/msm214
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- Article
The Early Branching Group of Orbiniida Sensu Struck et al., 2015: Parergodrilidae and Orbiniidae.
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- Diversity (14242818), 2021, v. 13, n. 1, p. 29, doi. 10.3390/d13010029
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- Article
Mitochondrial Genome Evolution in Annelida—A Systematic Study on Conservative and Variable Gene Orders and the Factors Influencing its Evolution.
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- Systematic Biology, 2023, v. 72, n. 4, p. 925, doi. 10.1093/sysbio/syad023
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- Article
Phylogenomics of Lophotrochozoa with Consideration of Systematic Error.
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- Systematic Biology, 2017, v. 66, n. 2, p. 256, doi. 10.1093/sysbio/syw079
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- Article
Phylogeny of Eunicida (Annelida) and Exploring Data Congruence Using a Partition Addition Bootstrap Alteration (PABA) Approach.
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- Systematic Biology, 2006, v. 55, n. 1, p. 1, doi. 10.1080/10635150500354910
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- Article
Incomplete lineage sorting and ancient admixture, and speciation without morphological change in ghost-worm cryptic species.
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- PeerJ, 2021, p. 1, doi. 10.7717/peerj.10896
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Multiple paths toward repeated phenotypic evolution in the spiny‐leg adaptive radiation (Tetragnatha; Hawai'i).
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- Molecular Ecology, 2023, v. 32, n. 18, p. 4971, doi. 10.1111/mec.17082
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Reproductive Biology and Phylogeny of Annelida.
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- 2007
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- Book Review
Identifying and addressing methodological incongruence in phylogenomics: A review.
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- Evolutionary Applications, 2023, v. 16, n. 6, p. 1087, doi. 10.1111/eva.13565
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- Article
Direction of evolution within Annelida and the definition of Pleistoannelida.
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- Journal of Zoological Systematics & Evolutionary Research, 2011, v. 49, n. 4, p. 340, doi. 10.1111/j.1439-0469.2011.00640.x
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- Article
Phylogenetic position of Sipuncula derived from multi-gene and phylogenomic data and its implication for the evolution of segmentation.
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- Journal of Zoological Systematics & Evolutionary Research, 2010, v. 48, n. 3, p. 197, doi. 10.1111/j.1439-0469.2010.00567.x
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- Article
Data congruence, paedomorphosis and salamanders.
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- Frontiers in Zoology, 2007, v. 4, p. 22, doi. 10.1186/1742-9994-4-22
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- Article
New phylogenomic data support the monophyly of Lophophorata and an Ectoproct-Phoronid clade and indicate that Polyzoa and Kryptrochozoa are caused by systematic bias.
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- BMC Evolutionary Biology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2148-13-253
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- Article
Annelid phylogeny and the status of Sipuncula and Echiura.
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- BMC Evolutionary Biology, 2007, v. 7, n. 1, p. N.PAG, doi. 10.1186/1471-2148-7-57
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- Article
Annelid phylogeny and the status of Sipuncula and Echiura.
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- BMC Evolutionary Biology, 2007, v. 7, p. 57, doi. 10.1186/1471-2148-7-57
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- Article
The role of systematics for understanding ecosystem functions: Proceedings of the Zoologica Scripta Symposium, Oslo, Norway, 25 August 2022.
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- Zoologica Scripta, 2023, v. 52, n. 3, p. 187, doi. 10.1111/zsc.12593
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- Article
Species delineation in the speciation grey zone—The case of Diopatra (Annelida, Onuphidae).
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- Zoologica Scripta, 2020, v. 49, n. 4, p. 516, doi. 10.1111/zsc.12421
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- Article
Origins of holopelagic Typhloscolecidae and Lopadorhynchidae within Phyllodocidae (Phyllodocida, Annelida).
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- Zoologica Scripta, 2010, v. 39, n. 3, p. 269, doi. 10.1111/j.1463-6409.2010.00418.x
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- Article
Deceleration of morphological evolution in a cryptic species complex and its link to paleontological stasis.
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- Evolution, 2020, v. 74, n. 1, p. 116, doi. 10.1111/evo.13884
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- Article