Works by Straver, Roy

Results: 13

Direct detection of 8-oxo-dG using nanopore sequencing.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-60391-3

By:

Pagès-Gallego, Marc;
van Soest, Daan M. K.;
Besselink, Nicolle J. M.;
Straver, Roy;
Keijer, Janneke P.;
Vermeulen, Carlo;
Marcozzi, Alessio;
van Roosmalen, Markus J.;
van Boxtel, Ruben;
Burgering, Boudewijn M. T.;
Dansen, Tobias B.;
de Ridder, Jeroen

Publication type:

Article

ReQuant: improved base modification calling by k-mer value imputation Open Access.

Published in:

Nucleic Acids Research, 2025, v. 53, n. 9, p. 1, doi. 10.1093/nar/gkaf323

By:

Straver, Roy;
Vermeulen, Carlo;
Verity-Legg, Joe R;
Pagès-Gallego, Marc;
Stoker, Dieter G G;
van Oudenaarden, Alexander;
de Ridder, Jeroen

Publication type:

Article

TargetClone: A multi-sample approach for reconstructing subclonal evolution of tumors.

Published in:

PLoS ONE, 2018, v. 13, n. 11, p. 1, doi. 10.1371/journal.pone.0208002

By:

Nieboer, Marleen M.;
Dorssers, Lambert C. J.;
Straver, Roy;
Looijenga, Leendert H. J.;
de Ridder, Jeroen

Publication type:

Article

Maternal Malignancies Detected With Noninvasive Prenatal Testing.

Published in:

2015

By:

Sistermans, Erik;
Straver, Roy;
Faas, Brigitte H. W.

Publication type:

commentary

Response to letter to the editor PD-17-0390, a comment on "Comparing methods for fetal fraction determination and quality control of NIPT samples".

Published in:

2017

By:

Beek, Daphne M.;
Straver, Roy;
Weiss, Marjan M.;
Boon, Elles M.J.;
Huijsdens‐van Amsterdam, Karin;
Oudejans, Cees B.M.;
Reinders, Marcel J.T.;
Sistermans, Erik A.;
van Beek, Daphne M;
Huijsdens-van Amsterdam, Karin

Publication type:

Letter

Comparing methods for fetal fraction determination and quality control of NIPT samples.

Published in:

2017

By:

Beek, Daphne M.;
Straver, Roy;
Weiss, Marian M.;
Boon, Elles M. J.;
Huijsdens‐van Amsterdam, Karin;
Oudejans, Cees B. M.;
Reinders, Marcel J. T.;
Sistermans, Erik A.;
van Beek, Daphne M;
Huijsdens-van Amsterdam, Karin

Publication type:

journal article

Cover Image, Volume 36, Issue 7.

Published in:

Prenatal Diagnosis, 2016, v. 36, n. 7, p. i, doi. 10.1002/pd.4738

By:

Straver, Roy;
Oudejans, Cees B. M.;
Sistermans, Erik A.;
Reinders, Marcel J. T.

Publication type:

Article

Calculating the fetal fraction for noninvasive prenatal testing based on genome-wide nucleosome profiles.

Published in:

2016

By:

Straver, Roy;
Oudejans, Cees B. M.;
Sistermans, Erik A.;
Reinders, Marcel J. T.

Publication type:

journal article

Multi-contact 4C: long-molecule sequencing of complex proximity ligation products to uncover local cooperative and competitive chromatin topologies.

Published in:

Nature Protocols, 2020, v. 15, n. 2, p. 364, doi. 10.1038/s41596-019-0242-7

By:

Vermeulen, Carlo;
Allahyar, Amin;
Bouwman, Britta A. M.;
Krijger, Peter H. L.;
Verstegen, Marjon J. A. M.;
Geeven, Geert;
Valdes-Quezada, Christian;
Renkens, Ivo;
Straver, Roy;
Kloosterman, Wigard P.;
de Ridder, Jeroen;
de Laat, Wouter

Publication type:

Article

Introducing WISECONDOR for noninvasive prenatal diagnostics.

Published in:

Expert Review of Molecular Diagnostics, 2014, v. 14, n. 5, p. 513, doi. 10.1586/14737159.2014.919855

By:

Straver, Roy;
Sistermans, Erik A;
Reinders, Marcel JT

Publication type:

Article

Author Correction: Accurate detection of circulating tumor DNA using nanopore consensus sequencing.

Published in:

2023

By:

Marcozzi, Alessio;
Jager, Myrthe;
Elferink, Martin;
Straver, Roy;
van Ginkel, Joost H.;
Peltenburg, Boris;
Chen, Li-Ting;
Renkens, Ivo;
van Kuik, Joyce;
Terhaard, Chris;
de Bree, Remco;
Devriese, Lot A.;
Willems, Stefan M.;
Kloosterman, Wigard P.;
de Ridder, Jeroen

Publication type:

Correction Notice

Accurate detection of circulating tumor DNA using nanopore consensus sequencing.

Published in:

NPJ Genomic Medicine, 2021, v. 6, n. 1, p. 1, doi. 10.1038/s41525-021-00272-y

By:

Marcozzi, Alessio;
Jager, Myrthe;
Elferink, Martin;
Straver, Roy;
van Ginkel, Joost H.;
Peltenburg, Boris;
Chen, Li-Ting;
Renkens, Ivo;
van Kuik, Joyce;
Terhaard, Chris;
de Bree, Remco;
Devriese, Lot A.;
Willems, Stefan M.;
Kloosterman, Wigard P.;
de Ridder, Jeroen

Publication type:

Article

WISECONDOR: detection of fetal aberrations from shallow sequencing maternal plasma based on a within-sample comparison scheme.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 5, p. e31, doi. 10.1093/nar/gkt992

By:

Straver, Roy;
Sistermans, Erik A.;
Holstege, Henne;
Visser, Allerdien;
Oudejans, Cees B. M.;
Reinders, Marcel J. T.

Publication type:

Article