Found: 20

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  • Grid Data Mirroring Package (GDMP).

    Published in:
    Scientific Programming, 2002, v. 10, n. 2, p. 121, doi. 10.1155/2002/514278
    By:
    • Stockinger, Heinz;
    • Samar, Asad;
    • Muzaffar, Shahzad;
    • Donno, Flavia
    Publication type:
    Article

  • The bio.tools registry of software tools and data resources for the life sciences.

    Published in:
    2019
    By:
    • Ison, Jon;
    • Ienasescu, Hans;
    • Chmura, Piotr;
    • Rydza, Emil;
    • Ménager, Hervé;
    • Kalaš, Matúš;
    • Schwämmle, Veit;
    • Grüning, Björn;
    • Beard, Niall;
    • Lopez, Rodrigo;
    • Duvaud, Severine;
    • Stockinger, Heinz;
    • Persson, Bengt;
    • Vařeková, Radka Svobodová;
    • Raček, Tomáš;
    • Vondrášek, Jiří;
    • Peterson, Hedi;
    • Salumets, Ahto;
    • Jonassen, Inge;
    • Hooft, Rob
    Publication type:
    Letter

  • Coev-web: a web platform designed to simulate and evaluate coevolving positions along a phylogenetic tree.

    Published in:
    BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/s12859-015-0785-8
    By:
    • Dib, Linda;
    • Meyer, Xavier;
    • Artimo, Panu;
    • Ioannidis, Vassilios;
    • Stockinger, Heinz;
    • Salamin, Nicolas
    Publication type:
    Article

  • Enabling semantic queries across federated bioinformatics databases.

    Published in:
    Database: The Journal of Biological Databases & Curation, 2019, v. 2019, p. N.PAG, doi. 10.1093/database/baz106
    By:
    • Sima, Ana Claudia;
    • Farias, Tarcisio Mendes de;
    • Zbinden, Erich;
    • Anisimova, Maria;
    • Gil, Manuel;
    • Stockinger, Heinz;
    • Stockinger, Kurt;
    • Robinson-Rechavi, Marc;
    • Dessimoz, Christophe
    Publication type:
    Article

  • Experience using web services for biological sequence analysis.

    Published in:
    Briefings in Bioinformatics, 2008, v. 9, n. 6, p. 493, doi. 10.1093/bib/bbn029
    By:
    • Stockinger, Heinz;
    • Attwood, Teresa;
    • Nadeem Chohan, Shahid;
    • Côté, Richard;
    • Cudré-Mauroux, Philippe;
    • Falquet, Laurent;
    • Fernandes, Pedro;
    • Finn, Robert D.;
    • Hupponen, Taavi;
    • Korpelainen, Eija;
    • Labarga, Alberto;
    • Laugraud, Aurelie;
    • Lima, Tania;
    • Pafilis, Evangelos;
    • Pagni, Marco;
    • Pettifer, Steve;
    • Phan, Isabelle;
    • Rahman, Nazim
    Publication type:
    Article

  • RAxML Grove: an empirical phylogenetic tree database.

    Published in:
    Bioinformatics, 2022, v. 38, n. 6, p. 1741, doi. 10.1093/bioinformatics/btab863
    By:
    • Höhler, Dimitri;
    • Pfeiffer, Wayne;
    • Ioannidis, Vassilios;
    • Stockinger, Heinz;
    • Stamatakis, Alexandros
    Publication type:
    Article

  • The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences.

    Published in:
    Bioinformatics, 2020, v. 36, n. 8, p. 2636, doi. 10.1093/bioinformatics/btz959
    By:
    • Drysdale, Rachel;
    • Cook, Charles E;
    • Petryszak, Robert;
    • Baillie-Gerritsen, Vivienne;
    • Barlow, Mary;
    • Gasteiger, Elisabeth;
    • Gruhl, Franziska;
    • Haas, Jürgen;
    • Lanfear, Jerry;
    • Lopez, Rodrigo;
    • Redaschi, Nicole;
    • Stockinger, Heinz;
    • Teixeira, Daniel;
    • Venkatesan, Aravind;
    • Forum, Elixir Core Data Resource;
    • Blomberg, Niklas;
    • Durinx, Christine;
    • McEntyre, Johanna
    Publication type:
    Article

  • Large-Scale Co-Phylogenetic Analysis on the Grid.

    Published in:
    International Journal of Grid & High Performance Computing, 2009, v. 1, n. 1, p. 39, doi. 10.4018/jghpc.2009010104
    By:
    • Stockinger, Heinz;
    • Auch, Alexander F.;
    • Göker, Markus;
    • Meier-Kolthoff, Jan;
    • Stamatakis, Alexandros
    Publication type:
    Article

  • Performance engineering in data Grids.

    Published in:
    Concurrency & Computation: Practice & Experience, 2005, v. 17, n. 2-4, p. 171, doi. 10.1002/cpe.923
    By:
    • Laure, Erwin;
    • Stockinger, Heinz;
    • Stockinger, Kurt
    Publication type:
    Article

  • Economic models for resource management and scheduling in Grid computing.

    Published in:
    Concurrency & Computation: Practice & Experience, 2002, v. 14, n. 13-15, p. 1507, doi. 10.1002/cpe.690
    By:
    • Buyya, Rajkumar;
    • Abramson, David;
    • Giddy, Jonathan;
    • Stockinger, Heinz
    Publication type:
    Article

  • Defining the grid: a snapshot on the current view.

    Published in:
    Journal of Supercomputing, 2007, v. 42, n. 1, p. 3, doi. 10.1007/s11227-006-0037-9
    By:
    • Stockinger, Heinz
    Publication type:
    Article

  • Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users.

    Published in:
    Nucleic Acids Research, 2021, v. 49, n. W1, p. W216, doi. 10.1093/nar/gkab225
    By:
    • Duvaud, Séverine;
    • Gabella, Chiara;
    • Lisacek, Frédérique;
    • Stockinger, Heinz;
    • Ioannidis, Vassilios;
    • Durinx, Christine
    Publication type:
    Article

  • Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support.

    Published in:
    Nucleic Acids Research, 2014, v. 42, n. W1, p. W436, doi. 10.1093/nar/gku380
    By:
    • Stockinger, Heinz;
    • Altenhoff, Adrian M.;
    • Arnold, Konstantin;
    • Bairoch, Amos;
    • Bastian, Frederic;
    • Bergmann, Sven;
    • Bougueleret, Lydie;
    • Bucher, Philipp;
    • Delorenzi, Mauro;
    • Lane, Lydie;
    • Mercier, Philippe Le;
    • Lisacek, Frédérique;
    • Michielin, Olivier;
    • Palagi, Patricia M.;
    • Rougemont, Jacques;
    • Schwede, Torsten;
    • Mering, Christian von;
    • Nimwegen, Erik van;
    • Walther, Daniel;
    • Xenarios, Ioannis
    Publication type:
    Article

  • Selectome update: quality control and computational improvements to a database of positive selection.

    Published in:
    Nucleic Acids Research, 2014, v. 42, n. D1, p. D917, doi. 10.1093/nar/gkt1065
    By:
    • Moretti, Sébastien;
    • Laurenczy, Balazs;
    • Gharib, Walid H.;
    • Castella, Briséïs;
    • Kuzniar, Arnold;
    • Schabauer, Hannes;
    • Studer, Romain A.;
    • Valle, Mario;
    • Salamin, Nicolas;
    • Stockinger, Heinz;
    • Robinson-Rechavi, Marc
    Publication type:
    Article

  • The EMBRACE web service collection.

    Published in:
    Nucleic Acids Research, 2010, v. 38, n. suppl_2, p. W683, doi. 10.1093/nar/gkq297
    By:
    • Pettifer, Steve;
    • Ison, Jon;
    • Kalaš, Matúš;
    • Thorne, Dave;
    • McDermott, Philip;
    • Jonassen, Inge;
    • Liaquat, Ali;
    • Fernández, José M.;
    • Rodriguez, Jose M.;
    • Partners, INB-;
    • Pisano, David G.;
    • Blanchet, Christophe;
    • Uludag, Mahmut;
    • Rice, Peter;
    • Bartaseviciute, Edita;
    • Rapacki, Kristoffer;
    • Hekkelman, Maarten;
    • Sand, Olivier;
    • Stockinger, Heinz;
    • Clegg, Andrew B.
    Publication type:
    Article

  • TRAL: tandem repeat annotation library.

    Published in:
    Bioinformatics, 2015, v. 31, n. 18, p. 3051, doi. 10.1093/bioinformatics/btv306
    By:
    • Schaper, Elke;
    • Korsunsky, Alexander;
    • Pečerska, Jūlija;
    • Messina, Antonio;
    • Murri, Riccardo;
    • Stockinger, Heinz;
    • Zoller, Stefan;
    • Xenarios, Ioannis;
    • Anisimova, Maria
    Publication type:
    Article

  • Optimization strategies for fast detection of positive selection on phylogenetic trees.

    Published in:
    Bioinformatics, 2014, v. 30, n. 8, p. 1129, doi. 10.1093/bioinformatics/btt760
    By:
    • Valle, Mario;
    • Schabauer, Hannes;
    • Pacher, Christoph;
    • Stockinger, Heinz;
    • Stamatakis, Alexandros;
    • Robinson-Rechavi, Marc;
    • Salamin, Nicolas
    Publication type:
    Article

  • PDB_REDO: automated re-refinement of X-ray structure models in the PDB.

    Published in:
    Journal of Applied Crystallography, 2009, v. 42, n. 3, p. 376, doi. 10.1107/S0021889809008784
    By:
    • Joosten, Robbie P.;
    • Salzemann, Jean;
    • Bloch, Vincent;
    • Stockinger, Heinz;
    • Berglund, Ann-Charlott;
    • Blanchet, Christophe;
    • Bongcam-Rudloff, Erik;
    • Combet, Christophe;
    • Da Costa, Ana L.;
    • Deleage, Gilbert;
    • Diarena, Matteo;
    • Fabbretti, Roberto;
    • Fettahi, Géraldine;
    • Flegel, Volker;
    • Gisel, Andreas;
    • Kasam, Vinod;
    • Kervinen, Timo;
    • Korpelainen, Eija;
    • Mattila, Kimmo;
    • Pagni, Marco
    Publication type:
    Article

  • Publisher Correction: Federated discovery and sharing of genomic data using Beacons.

    Published in:
    2019
    By:
    • Fiume, Marc;
    • Cupak, Miroslav;
    • Keenan, Stephen;
    • Rambla, Jordi;
    • de la Torre, Sabela;
    • Dyke, Stephanie O. M.;
    • Brookes, Anthony J.;
    • Carey, Knox;
    • Lloyd, David;
    • Goodhand, Peter;
    • Haeussler, Maximilian;
    • Baudis, Michael;
    • Stockinger, Heinz;
    • Dolman, Lena;
    • Lappalainen, Ilkka;
    • Törnroos, Juha;
    • Linden, Mikael;
    • Spalding, J. Dylan;
    • Ur-Rehman, Saif;
    • Page, Angela
    Publication type:
    Correction Notice

  • Federated discovery and sharing of genomic data using Beacons.

    Published in:
    Nature Biotechnology, 2019, v. 37, n. 3, p. 220, doi. 10.1038/s41587-019-0046-x
    By:
    • Fiume, Marc;
    • Cupak, Miroslav;
    • Keenan, Stephen;
    • Rambla, Jordi;
    • de la Torre, Sabela;
    • Dyke, Stephanie O. M.;
    • Brookes, Anthony J.;
    • Carey, Knox;
    • Lloyd, David;
    • Goodhand, Peter;
    • Haeussler, Maximilian;
    • Baudis, Michael;
    • Stockinger, Heinz;
    • Dolman, Lena;
    • Lappalainen, Ilkka;
    • Törnroos, Juha;
    • Linden, Mikael;
    • Spalding, J. Dylan;
    • Ur-Rehman, Saif;
    • Page, Angela
    Publication type:
    Article