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Prediction of Klebsiella phage-host specificity at the strain level.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48675-6
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- Article
Engineering is evolution: a perspective on design processes to engineer biology.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48000-1
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- Article
Editorial: Plant sensing and computing - PlantComp 2022.
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- Frontiers in Plant Science, 2024, p. 01, doi. 10.3389/fpls.2024.1384726
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The role of Helicobacter suis, Fusobacterium gastrosuis, and the pars oesophageal microbiota in gastric ulceration in slaughter pigs receiving meal or pelleted feed.
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- Veterinary Research, 2024, v. 55, n. 1, p. 1, doi. 10.1186/s13567-024-01274-1
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- Article
Plant impedance spectroscopy: a review of modeling approaches and applications.
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- Frontiers in Plant Science, 2023, p. 1, doi. 10.3389/fpls.2023.1187573
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- Article
Leveraging plant physiological dynamics using physical reservoir computing.
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- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-16874-0
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- Article
Machine Learning to Assist in Large-Scale, Activity-Based Synthetic Cannabinoid Receptor Agonist Screening of Serum Samples.
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- Clinical Chemistry, 2022, v. 68, n. 7, p. 906, doi. 10.1093/clinchem/hvac027
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- Article
Covering the Combinatorial Design Space of Multiplex CRISPR/Cas Experiments in Plants.
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- Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.907095
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- Article
Identification of Phage Receptor-Binding Protein Sequences with Hidden Markov Models and an Extreme Gradient Boosting Classifier.
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- Viruses (1999-4915), 2022, v. 14, n. 6, p. N.PAG, doi. 10.3390/v14061329
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BioCCP.jl: collecting coupons in combinatorial biotechnology.
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- Bioinformatics, 2022, v. 38, n. 4, p. 1144, doi. 10.1093/bioinformatics/btab775
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- Article
On the pivotal role of water potential to model plant physiological processes.
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- In Silico Plants, 2022, v. 4, n. 1, p. 1, doi. 10.1093/insilicoplants/diab038
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- Article
PhaLP: A Database for the Study of Phage Lytic Proteins and Their Evolution.
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- Viruses (1999-4915), 2021, v. 13, n. 7, p. 1240, doi. 10.3390/v13071240
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- Article
Disentangling the Information in Species Interaction Networks.
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- Entropy, 2021, v. 23, n. 6, p. 703, doi. 10.3390/e23060703
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- Article
Optimal transportation theory for species interaction networks.
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- Ecology & Evolution (20457758), 2021, v. 11, n. 9, p. 3841, doi. 10.1002/ece3.7254
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- Article
Cold-Start Problems in Data-Driven Prediction of Drug–Drug Interaction Effects.
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- Pharmaceuticals (14248247), 2021, v. 14, n. 5, p. 429, doi. 10.3390/ph14050429
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- Article
Rapid and High-Throughput Evaluation of Diverse Configurations of Engineered Lysins Using the VersaTile Technique.
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- Antibiotics (2079-6382), 2021, v. 10, n. 3, p. 293, doi. 10.3390/antibiotics10030293
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Predicting bacteriophage hosts based on sequences of annotated receptor-binding proteins.
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- Scientific Reports, 2021, v. 10, n. 1, p. 1, doi. 10.1038/s41598-021-81063-4
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- Article
Predictive design of sigma factor-specific promoters.
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- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-19446-w
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- Article
Gloxinia—An Open-Source Sensing Platform to Monitor the Dynamic Responses of Plants.
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- Sensors (14248220), 2020, v. 20, n. 11, p. 3055, doi. 10.3390/s20113055
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Predicting Pharmaceutical Particle Size Distributions Using Kernel Mean Embedding.
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- Pharmaceutics, 2020, v. 12, n. 3, p. 271, doi. 10.3390/pharmaceutics12030271
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Algebraic shortcuts for leave-one-out cross-validation in supervised network inference.
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- Briefings in Bioinformatics, 2020, v. 21, n. 1, p. 262, doi. 10.1093/bib/bby095
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- Article
X-ray microtomography and linear discriminant analysis enable detection of embolism-related acoustic emissions.
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- Plant Methods, 2019, v. 15, n. 1, p. 1, doi. 10.1186/s13007-019-0543-4
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- Article
EcologicalNetworks.jl: analysing ecological networks of species interactions.
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- Ecography, 2019, v. 42, n. 11, p. 1850, doi. 10.1111/ecog.04310
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Liquid‐to‐solid ratio control as an advanced process control solution for continuous twin‐screw wet granulation.
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- AIChE Journal, 2018, v. 64, n. 7, p. 2500, doi. 10.1002/aic.16161
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miSTAR: miRNA target prediction through modeling quantitative and qualitative miRNA binding site information in a stacked model structure.
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- Nucleic Acids Research, 2017, v. 45, n. 7, p. 1, doi. 10.1093/nar/gkw1260
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- Article
Linear filtering reveals false negatives in species interaction data.
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- Scientific Reports, 2017, p. 45908, doi. 10.1038/srep45908
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Exact and efficient top- K inference for multi-target prediction by querying separable linear relational models.
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- Data Mining & Knowledge Discovery, 2016, v. 30, n. 5, p. 1370, doi. 10.1007/s10618-016-0456-z
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Efficient regularized least-squares algorithms for conditional ranking on relational data.
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- Machine Learning, 2013, v. 93, n. 2-3, p. 321, doi. 10.1007/s10994-013-5354-7
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- Article