Works by Stein, Lisa Y.

Results: 40

Microbial solutions must be deployed against climate catastrophe.

Published in:

2024

By:

Peixoto, Raquel;
Voolstra, Christian R.;
Stein, Lisa Y.;
Hugenholtz, Philip;
Salles, Joana Falcao;
Amin, Shady A.;
Häggblom, Max;
Gregory, Ann;
Makhalanyane, Thulani P.;
Wang, Fengping;
Agbodjato, Nadège Adoukè;
Wang, Yinzhao;
Jiao, Nianzhi;
Lennon, Jay T.;
Ventosa, Antonio;
Bavoil, Patrik M.;
Miller, Virginia;
Gilbert, Jack A.

Publication type:

Editorial

Microbial solutions must be deployed against climate catastrophe.

Published in:

Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-07108-2

By:

Peixoto, Raquel;
Voolstra, Christian R.;
Stein, Lisa Y.;
Hugenholtz, Philip;
Salles, Joana Falcao;
Amin, Shady A.;
Häggblom, Max;
Gregory, Ann;
Makhalanyane, Thulani P.;
Wang, Fengping;
Agbodjato, Nadège Adoukè;
Wang, Yinzhao;
Jiao, Nianzhi;
Lennon, Jay T.;
Ventosa, Antonio;
Bavoil, Patrik M.;
Miller, Virginia;
Gilbert, Jack A.

Publication type:

Article

Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil.

Published in:

Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0168-4

By:

Rice, Marlen C.;
Norton, Jeanette M.;
Valois, Frederica;
Bollmann, Annette;
Bottomley, Peter J.;
Klotz, Martin G.;
Laanbroek, Hendrikus J.;
Suwa, Yuichi;
Stein, Lisa Y.;
Sayavedra-Soto, Luis;
Woyke, Tanja;
Shapiro, Nicole;
Goodwin, Lynne A.;
Huntemann, Marcel;
Clum, Alicia;
Pillay, Manoj;
Kyrpides, Nikos;
Varghese, Neha;
Mikhailova, Natalia;
Markowitz, Victor

Publication type:

Article

Positron‐emitting radiotracers spatially resolve unexpected biogeochemical relationships linked with methane oxidation in Arctic soils.

Published in:

Global Change Biology, 2022, v. 28, n. 13, p. 4211, doi. 10.1111/gcb.16188

By:

Schmidt, Michael P.;
Mamet, Steven D.;
Senger, Curtis;
Schebel, Alixandra;
Ota, Mitsuaki;
Tian, Tony W.;
Aziz, Umair;
Stein, Lisa Y.;
Regier, Tom;
Stanley, Kevin;
Peak, Derek;
Siciliano, Steven D.

Publication type:

Article

Microbial solutions must be deployed against climate catastrophe.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-53680-w

By:

Peixoto, Raquel;
Voolstra, Christian R.;
Stein, Lisa Y.;
Hugenholtz, Philip;
Salles, Joana Falcao;
Amin, Shady A.;
Häggblom, Max;
Gregory, Ann;
Makhalanyane, Thulani P.;
Wang, Fengping;
Agbodjato, Nadège Adoukè;
Wang, Yinzhao;
Jiao, Nianzhi;
Lennon, Jay T.;
Ventosa, Antonio;
Bavoil, Patrik M.;
Miller, Virginia;
Gilbert, Jack A.

Publication type:

Article

Bacterial and archaeal populations associated with freshwater ferromanganous micronodules and....

Published in:

Environmental Microbiology, 2001, v. 3, n. 1, p. 10, doi. 10.1046/j.1462-2920.2001.00154.x

By:

Stein, Lisa Y.;
La Duc, Myron T.;
Grundl, Timothy J.;
Nealson, Kenneth H.

Publication type:

Article

Adaptations to Submarine Hydrothermal Environments Exemplified by the Genome of Nautilia profundicola.

Published in:

PLoS Genetics, 2009, v. 5, n. 2, p. 1, doi. 10.1371/journal.pgen.1000362

By:

Campbell, Barbara J.;
Smith, Julie L.;
Hanson, Thomas E.;
Klotz, Martin G.;
Stein, Lisa Y.;
Lee, Charles K.;
Dongying Wu;
Robinson, Jeffrey M.;
Khouri, Hoda M.;
Eisen, Jonathan A.;
Cary, S. Craig

Publication type:

Article

The influence of self-cycling fermentation long- and short-cycle schemes on Saccharomyces cerevisiae and Escherichia coli.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-16831-x

By:

Tan, Yusheng;
Stein, Lisa Y.;
Sauvageau, Dominic

Publication type:

Article

Ending the era of Haber–Bosch.

Published in:

Environmental Microbiology, 2023, v. 25, n. 1, p. 102, doi. 10.1111/1462-2920.16220

By:

Stein, Lisa Y.

Publication type:

Article

Resolving N<sub>2</sub>O respiration pathways: a tale of two NosZ clades.

Published in:

Environmental Microbiology, 2017, v. 19, n. 12, p. 4806, doi. 10.1111/1462-2920.13969

By:

Stein, Lisa Y.

Publication type:

Article

Methylamine: a vital nitrogen (and carbon) source for marine microbes.

Published in:

Environmental Microbiology, 2017, v. 19, n. 6, p. 2117, doi. 10.1111/1462-2920.13716

By:

Stein, Lisa Y.

Publication type:

Article

Methane oxidation coupled to nitrate reduction under hypoxia by the Gammaproteobacterium M ethylomonas denitrificans, sp. nov. type strain FJG1.

Published in:

Environmental Microbiology, 2015, v. 17, n. 9, p. 3219, doi. 10.1111/1462-2920.12772

By:

Kits, K. Dimitri;
Klotz, Martin G.;
Stein, Lisa Y.

Publication type:

Article

Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation.

Published in:

Environmental Microbiology, 2007, v. 9, n. 12, p. 2993, doi. 10.1111/j.1462-2920.2007.01409.x

By:

Stein, Lisa Y.;
Arp, Daniel J.;
Berube, Paul M.;
Chain, Patrick S. G.;
Hauser, Loren;
Jetten, Mike S. M.;
Klotz, Martin G.;
Larimer, Frank W.;
Norton, Jeanette M.;
Op den Camp, Huub J. M.;
Shin, Maria;
Xueming Wei

Publication type:

Article

Molecular diversity of nitrite reductase genes ( nirK) in nitrifying bacteria.

Published in:

Environmental Microbiology, 2007, v. 9, n. 3, p. 765, doi. 10.1111/j.1462-2920.2006.01198.x

By:

Cantera, J. Jason L.;
Stein, Lisa Y.

Publication type:

Article

Visualizing the invisible: class excursions to ignite children's enthusiasm for microbes.

Published in:

Microbial Biotechnology, 2020, v. 13, n. 4, p. 844, doi. 10.1111/1751-7915.13576

By:

McGenity, Terry J.;
Gessesse, Amare;
Hallsworth, John E.;
Garcia Cela, Esther;
Verheecke‐Vaessen, Carol;
Wang, Fengping;
Chavarría, Max;
Haggblom, Max M.;
Molin, Søren;
Danchin, Antoine;
Smid, Eddy J.;
Lood, Cédric;
Cockell, Charles S.;
Whitby, Corinne;
Liu, Shuang‐Jiang;
Keller, Nancy P.;
Stein, Lisa Y.;
Bordenstein, Seth R.;
Lal, Rup;
Nunes, Olga C.

Publication type:

Article

Optimization of Methane Feed and N:C Ratio for Biomass and Polyhydroxybutyrate Production by the Alphaproteobacterial Methanotroph Methylocystis sp. Rockwell.

Published in:

Methane, 2022, v. 1, n. 4, p. 355, doi. 10.3390/methane1040026

By:

Sharma, Hem K.;
Sauvageau, Dominic;
Stein, Lisa Y.

Publication type:

Article

Addendum: Editorial: Linking Ecosystem Function to Microbial Diversity.

Published in:

2016

By:

Bernhard, Anne E.;
Kelly, John J.;
Stein, Lisa Y.

Publication type:

Correction Notice

Comparison of Nitrogen Oxide Metabolism among Diverse Ammonia-Oxidizing Bacteria.

Published in:

Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.01090

By:

Kozlowski, Jessica A.;
Kits, K. Dimitri;
Stein, Lisa Y.;
Moir, James;
Perez, Julio

Publication type:

Article

Population Dynamics and Community Composition of Ammonia Oxidizers in Salt Marshes after the Deepwater Horizon Oil Spill.

Published in:

Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00854

By:

Bernhard, Anne E.;
Sheffer, Roberta;
Giblin, Anne E.;
Marton, John M.;
Roberts, Brian J.;
Stein, Lisa Y.;
Laanbroek, Hendrikus (Riks)

Publication type:

Article

Diverse electron sources support denitrification under hypoxia in the obligate methanotroph Methylomicrobium album strain BG8.

Published in:

Frontiers in Microbiology, 2015, v. 6, p. 1, doi. 10.3389/fmicb.2015.01072

By:

Kits, K. Dimitri;
Campbell, Dustin J.;
Rosana, Albert R.;
Stein, Lisa Y.;
Kalyuzhanaya, Marina G.;
Ho, Adrian

Publication type:

Article

Characterization of denitrifying activity by the alphaproteobacterium, Sphingomonas wittichii RW1.

Published in:

Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00404

By:

Cua, Lynnie S.;
Stein, Lisa Y.

Publication type:

Article

Accessories make the microbe.

Published in:

Environmental Microbiology Reports, 2017, v. 9, n. 1, p. 21, doi. 10.1111/1758-2229.12492

By:

Stein, Lisa Y.

Publication type:

Article

Microbial solutions must be deployed against climate catastrophe.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2024, v. 18, n. 1, p. 1, doi. 10.1093/ismejo/wrae219

By:

Peixoto, Raquel;
Voolstra, Christian R;
Stein, Lisa Y;
Hugenholtz, Philip;
Salles, Joana Falcao;
Amin, Shady A;
Häggblom, Max;
Gregory, Ann;
Makhalanyane, Thulani P;
Wang, Fengping;
Agbodjato, Nadège Adoukè;
Wang, Yinzhao;
Jiao, Nianzhi;
Lennon, Jay T;
Ventosa, Antonio;
Bavoil, Patrik M;
Miller, Virginia;
Gilbert, Jack A

Publication type:

Article

Leveraging genome-scale metabolic models to understand aerobic methanotrophs.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2024, v. 18, n. 1, p. 1, doi. 10.1093/ismejo/wrae102

By:

Wutkowska, Magdalena;
Tláskal, Vojtěch;
Bordel, Sergio;
Stein, Lisa Y;
Nweze, Justus Amuche;
Daebeler, Anne

Publication type:

Article

Microbiome of the freshwater sponge Ephydatia muelleri shares compositional and functional similarities with those of marine sponges.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2022, v. 16, n. 11, p. 2503, doi. 10.1038/s41396-022-01296-7

By:

Sugden, Scott;
Holert, Johannes;
Cardenas, Erick;
Mohn, William W.;
Stein, Lisa Y.

Publication type:

Article

Pathways and key intermediates required for obligate aerobic ammonia-dependent chemolithotrophy in bacteria and Thaumarchaeota.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2016, v. 10, n. 8, p. 1836, doi. 10.1038/ismej.2016.2

By:

Kozlowski, Jessica A;
Stieglmeier, Michaela;
Schleper, Christa;
Klotz, Martin G;
Stein, Lisa Y

Publication type:

Article

Microbial solutions must be deployed against climate catastrophe.

Published in:

2024

By:

Peixoto, Raquel;
Voolstra, Christian R.;
Stein, Lisa Y.;
Hugenholtz, Philip;
Salles, Joana Falcao;
Amin, Shady A.;
Häggblom, Max;
Gregory, Ann;
Makhalanyane, Thulani P.;
Wang, Fengping;
Agbodjato, Nadège Adoukè;
Wang, Yinzhao;
Jiao, Nianzhi;
Lennon, Jay T.;
Ventosa, Antonio;
Bavoil, Patrik M.;
Miller, Virginia;
Gilbert, Jack A.

Publication type:

Letter

Individual and Site-Specific Variation in a Biogeographical Profile of the Coyote Gastrointestinal Microbiota.

Published in:

Microbial Ecology, 2021, v. 81, n. 1, p. 240, doi. 10.1007/s00248-020-01547-0

By:

Sugden, Scott;
St. Clair, Colleen Cassady;
Stein, Lisa Y.

Publication type:

Article

A Physiological and Genomic Comparison of Nitrosomonas Cluster 6a and 7 Ammonia-Oxidizing Bacteria.

Published in:

Microbial Ecology, 2019, v. 78, n. 4, p. 985, doi. 10.1007/s00248-019-01378-8

By:

Sedlacek, Christopher J.;
McGowan, Brian;
Suwa, Yuichi;
Sayavedra-Soto, Luis;
Laanbroek, Hendrikus J.;
Stein, Lisa Y.;
Norton, Jeanette M.;
Klotz, Martin G.;
Bollmann, Annette

Publication type:

Article

Role of nitrite reductase in the ammonia-oxidizing pathway of Nitrosomonas europaea.

Published in:

Archives of Microbiology, 2007, v. 188, n. 4, p. 349, doi. 10.1007/s00203-007-0255-4

By:

Jason, J.;
Cantera, L.;
Stein, Lisa Y.

Publication type:

Article

In vivo quantification of polyhydroxybutyrate (PHB) in the alphaproteobacterial methanotroph, Methylocystis sp. Rockwell.

Published in:

Applied Microbiology & Biotechnology, 2022, v. 106, n. 2, p. 811, doi. 10.1007/s00253-021-11732-x

By:

Lazic, Marina;
Gudneppanavar, Ravindra;
Whiddon, Kyle;
Sauvageau, Dominic;
Stein, Lisa Y.;
Konopka, Michael

Publication type:

Article

Development of an aquaponics microbial inoculum for efficient nitrification at acidic pH.

Published in:

Applied Microbiology & Biotechnology, 2021, v. 105, n. 18, p. 7009, doi. 10.1007/s00253-021-11529-y

By:

Derikvand, Peyman;
Sauter, Brittany;
Stein, Lisa Y.

Publication type:

Article

An altered microbiome in urban coyotes mediates relationships between anthropogenic diet and poor health.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-78891-1

By:

Sugden, Scott;
Sanderson, Dana;
Ford, Kyra;
Stein, Lisa Y.;
St. Clair, Colleen Cassady

Publication type:

Article

Combined Effects of Carbon and Nitrogen Source to Optimize Growth of Proteobacterial Methanotrophs.

Published in:

Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.02239

By:

Tays, Catherine;
Guarnieri, Michael T.;
Sauvageau, Dominic;
Stein, Lisa Y.

Publication type:

Article

Defining Nutrient Combinations for Optimal Growth and Polyhydroxybutyrate Production by <italic>Methylosinus trichosporium</italic> OB3b Using Response Surface Methodology.

Published in:

Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.01513

By:

Zaldívar Carrillo, Jorge A.;
Stein, Lisa Y.;
Sauvageau, Dominic

Publication type:

Article

Comparative Proteomics of Three Species of Ammonia-Oxidizing Bacteria.

Published in:

Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.00938

By:

Zorz, Jackie K.;
Kozlowski, Jessica A.;
Stein, Lisa Y.;
Strous, Marc;
Kleiner, Manuel

Publication type:

Article

Methanol bioconversion in Methylotuvimicrobium buryatense 5GB1C through self-cycling fermentation.

Published in:

Bioprocess & Biosystems Engineering, 2023, v. 46, n. 7, p. 969, doi. 10.1007/s00449-023-02876-3

By:

Tan, Yusheng;
Stein, Lisa Y.;
Sauvageau, Dominic

Publication type:

Article

Metabolism of Inorganic N Compounds by Ammonia-Oxidizing Bacteria.

Published in:

Critical Reviews in Biochemistry & Molecular Biology, 2003, v. 38, n. 6, p. 471, doi. 10.1080/10409230390267446

By:

Arp, Daniel J.;
Stein, Lisa Y.

Publication type:

Article

Microbiology: Cyanate fuels the nitrogen cycle.

Published in:

Nature, 2015, v. 524, n. 7563, p. 43, doi. 10.1038/nature14639

By:

Stein, Lisa Y.

Publication type:

Article

Low yield and abiotic origin of N<sub>2</sub>O formed by the complete nitrifier Nitrospira inopinata.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-09790-x

By:

Kits, K. Dimitri;
Jung, Man-Young;
Vierheilig, Julia;
Pjevac, Petra;
Sedlacek, Christopher J.;
Liu, Shurong;
Herbold, Craig;
Stein, Lisa Y.;
Richter, Andreas;
Wissel, Holger;
Brüggemann, Nicolas;
Wagner, Michael;
Daims, Holger

Publication type:

Article