Works matching AU Stegle, Oliver


Results: 77
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    Arabidopsis Defense against Botrytis cinerea: Chronology and Regulation Deciphered by High-Resolution Temporal Transcriptomic Analysis.

    Published in:
    Plant Cell, 2012, v. 24, n. 9, p. 3530, doi. 10.1105/tpc.112.102046
    By:
    • Windram, Oliver;
    • Madhou, Priyadharshini;
    • McHattie, Stuart;
    • Hill, Claire;
    • Hickman, Richard;
    • Cooke, Emma;
    • Jenkins, Dafyd J.;
    • Penfold, Christopher A.;
    • Baxter, Laura;
    • Breeze, Emily;
    • Kiddle, Steven J.;
    • Rhodes, Johanna;
    • Atwell, Susanna;
    • Kliebenstein, Daniel J.;
    • Kim, Youn-sung;
    • Stegle, Oliver;
    • Borgwardt, Karsten;
    • Zhang, Cunjin;
    • Tabrett, Alex;
    • Legaie, Roxane
    Publication type:
    Article
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    Dissecting indirect genetic effects from peers in laboratory mice.

    Published in:
    Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02415-x
    By:
    • Baud, Amelie;
    • Casale, Francesco Paolo;
    • Barkley-Levenson, Amanda M.;
    • Farhadi, Nilgoun;
    • Montillot, Charlotte;
    • Yalcin, Binnaz;
    • Nicod, Jerome;
    • Palmer, Abraham A.;
    • Stegle, Oliver
    Publication type:
    Article
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    Whole-genome sequencing of multiple Arabidopsis thaliana populations.

    Published in:
    Nature Genetics, 2011, v. 43, n. 10, p. 956, doi. 10.1038/ng.911
    By:
    • Cao, Jun;
    • Schneeberger, Korbinian;
    • Ossowski, Stephan;
    • Günther, Torsten;
    • Bender, Sebastian;
    • Fitz, Joffrey;
    • Koenig, Daniel;
    • Lanz, Christa;
    • Stegle, Oliver;
    • Lippert, Christoph;
    • Wang, Xi;
    • Ott, Felix;
    • Müller, Jonas;
    • Alonso-Blanco, Carlos;
    • Borgwardt, Karsten;
    • Schmid, Karl J;
    • Weigel, Detlef
    Publication type:
    Article
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    Subclone-specific microenvironmental impact and drug response in refractory multiple myeloma revealed by single‐cell transcriptomics.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26951-z
    By:
    • Tirier, Stephan M.;
    • Mallm, Jan-Philipp;
    • Steiger, Simon;
    • Poos, Alexandra M.;
    • Awwad, Mohamed H. S.;
    • Giesen, Nicola;
    • Casiraghi, Nicola;
    • Susak, Hana;
    • Bauer, Katharina;
    • Baumann, Anja;
    • John, Lukas;
    • Seckinger, Anja;
    • Hose, Dirk;
    • Müller-Tidow, Carsten;
    • Goldschmidt, Hartmut;
    • Stegle, Oliver;
    • Hundemer, Michael;
    • Weinhold, Niels;
    • Raab, Marc S.;
    • Rippe, Karsten
    Publication type:
    Article
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    P-060: Subclone-specific microenvironmental impact and drug response in refractory multiple myeloma revealed by single cell transcriptomics.

    Published in:
    Clinical Lymphoma, Myeloma & Leukemia, 2021, v. 21, p. S71, doi. 10.1016/S2152-2650(21)02194-7
    By:
    • Rippe, Karsten;
    • Tirier, Stephan;
    • Mallm, Jan-Philipp;
    • Steiger, Simon;
    • Poos, Alexandra;
    • Awwad, Mohamed;
    • Giesen, Nicola;
    • Casiraghi, Nicola;
    • Susak, Hana;
    • Bauer, Katharina;
    • Baumann, Anja;
    • John, Lukas;
    • Seckinger, Anja;
    • Hose, Dirk;
    • Müller-Tidow, Carsten;
    • Goldschmidt, Hartmut;
    • Stegle, Oliver;
    • Hundemer, Michael;
    • Weinhold, Niels;
    • Raab, Marc
    Publication type:
    Article
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    OAB-007: Single-cell multiomic analysis identifies regulatory programs in relapsed/refractory multiple myeloma.

    Published in:
    Clinical Lymphoma, Myeloma & Leukemia, 2021, v. 21, p. S5, doi. 10.1016/S2152-2650(21)02081-4
    By:
    • Poos, Alexandra;
    • Przybilla, Moritz;
    • Prokoph, Nina;
    • Malllm, Jan-Philipp;
    • Tirier, Stephan;
    • Steiger, Simon;
    • Lander, Isabelle;
    • Giesen, Nicola;
    • John, Lukas;
    • Bauer, Katharina;
    • Baumann, Anja;
    • Huhn, Stefanie;
    • Grab, Anna;
    • Müller-Tidow, Carsten;
    • Goldschmidt, Hartmut;
    • Stegle, Oliver;
    • Raab, Marc;
    • Rippe, Karsten;
    • Weinhold, Niels
    Publication type:
    Article
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    Deep learning for computational biology.

    Published in:
    Molecular Systems Biology, 2016, v. 12, n. 7, p. n/a, doi. 10.15252/msb.20156651
    By:
    • Angermueller, Christof;
    • Pärnamaa, Tanel;
    • Parts, Leopold;
    • Stegle, Oliver
    Publication type:
    Article
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    Genomic Rearrangements in Arabidopsis Considered as Quantitative Traits.

    Published in:
    Genetics, 2017, v. 205, n. 4, p. 1425, doi. 10.1534/genetics.116.192823
    By:
    • Imprialou, Martha;
    • Kahles, André;
    • Steffen, Joshua G.;
    • Osborne, Edward J.;
    • Xiangchao Gan;
    • Lempe, Janne;
    • Bhomra, Amarjit;
    • Belfield, Eric;
    • Visscher, Anne;
    • Greenhalgh, Robert;
    • Harberd, Nicholas P.;
    • Goram, Richard;
    • Hein, Jotun;
    • Robert-Seilaniantz, Alexandre;
    • Jones, Jonathan;
    • Stegle, Oliver;
    • Kover, Paula;
    • Tsiantis, Miltos;
    • Nordborg, Magnus;
    • Rätsch, Gunnar
    Publication type:
    Article
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    Cell segmentation-free inference of cell types from in situ transcriptomics data.

    Published in:
    Nature Communications, 2021, v. 12, p. 1, doi. 10.1038/s41467-021-23807-4
    By:
    • Park, Jeongbin;
    • Choi, Wonyl;
    • Tiesmeyer, Sebastian;
    • Long, Brian;
    • Borm, Lars E.;
    • Garren, Emma;
    • Nguyen, Thuc Nghi;
    • Tasic, Bosiljka;
    • Codeluppi, Simone;
    • Graf, Tobias;
    • Schlesner, Matthias;
    • Stegle, Oliver;
    • Eils, Roland;
    • Ishaque, Naveed
    Publication type:
    Article
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    Cell segmentation-free inference of cell types from in situ transcriptomics data.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23807-4
    By:
    • Park, Jeongbin;
    • Choi, Wonyl;
    • Tiesmeyer, Sebastian;
    • Long, Brian;
    • Borm, Lars E.;
    • Garren, Emma;
    • Nguyen, Thuc Nghi;
    • Tasic, Bosiljka;
    • Codeluppi, Simone;
    • Graf, Tobias;
    • Schlesner, Matthias;
    • Stegle, Oliver;
    • Eils, Roland;
    • Ishaque, Naveed
    Publication type:
    Article
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    Cell segmentation-free inference of cell types from in situ transcriptomics data.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23807-4
    By:
    • Park, Jeongbin;
    • Choi, Wonyl;
    • Tiesmeyer, Sebastian;
    • Long, Brian;
    • Borm, Lars E.;
    • Garren, Emma;
    • Nguyen, Thuc Nghi;
    • Tasic, Bosiljka;
    • Codeluppi, Simone;
    • Graf, Tobias;
    • Schlesner, Matthias;
    • Stegle, Oliver;
    • Eils, Roland;
    • Ishaque, Naveed
    Publication type:
    Article
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    Discovery and quality analysis of a comprehensive set of structural variants and short tandem repeats.

    Published in:
    Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16481-5
    By:
    • Jakubosky, David;
    • Smith, Erin N.;
    • D'Antonio, Matteo;
    • Jan Bonder, Marc;
    • Young Greenwald, William W.;
    • D'Antonio-Chronowska, Agnieszka;
    • Matsui, Hiroko;
    • i2QTL Consortium;
    • Bonder, Marc J.;
    • Cai, Na;
    • Carcamo-Orive, Ivan;
    • Frazer, Kelly A.;
    • Knowles, Joshua W.;
    • McCarthy, Davis J.;
    • Mirauta, Bogdan A.;
    • Montgomery, Stephen B.;
    • Quertermous, Thomas;
    • Seaton, Daniel D.;
    • Smail, Craig;
    • Stegle, Oliver
    Publication type:
    Article
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    Four Core Genotypes mice harbour a 3.2MB X-Y translocation that perturbs Tlr7 dosage.

    Published in:
    Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-52640-8
    By:
    • Panten, Jasper;
    • Del Prete, Stefania;
    • Cleland, James P.;
    • Saunders, Lauren M.;
    • van Riet, Job;
    • Schneider, Anja;
    • Ginno, Paul;
    • Schneider, Nina;
    • Koch, Marie-Luise;
    • Chen, Xuqi;
    • Gerstung, Moritz;
    • Stegle, Oliver;
    • Arnold, Arthur P.;
    • Turner, James M. A.;
    • Heard, Edith;
    • Odom, Duncan T.
    Publication type:
    Article
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    Genome-wide mapping of genetic determinants influencing DNA methylation and gene expression in human hippocampus.

    Published in:
    Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-01818-4
    By:
    • Schulz, Herbert;
    • Ruppert, Ann-Kathrin;
    • Herms, Stefan;
    • Wolf, Christiane;
    • Mirza-Schreiber, Nazanin;
    • Stegle, Oliver;
    • Czamara, Darina;
    • Forstner, Andreas J.;
    • Sivalingam, Sugirthan;
    • Schoch, Susanne;
    • Moebus, Susanne;
    • Pütz, Benno;
    • Hillmer, Axel;
    • Fricker, Nadine;
    • Vatter, Hartmut;
    • Müller-Myhsok, Bertram;
    • Nöthen, Markus M.;
    • Becker, Albert J.;
    • Hoffmann, Per;
    • Sander, Thomas
    Publication type:
    Article
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