Works by Staaf, Johan


Results: 92
    1

    The DNA methylation landscape of primary triple-negative breast cancer.

    Published in:
    Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-58158-x
    By:
    • Aine, Mattias;
    • Nacer, Deborah F.;
    • Arbajian, Elsa;
    • Veerla, Srinivas;
    • Karlsson, Anna;
    • Häkkinen, Jari;
    • Johansson, Henrik J.;
    • Rosengren, Frida;
    • Vallon-Christersson, Johan;
    • Borg, Åke;
    • Staaf, Johan
    Publication type:
    Article
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    Genomic characterization of the HER2-enriched intrinsic molecular subtype in primary ER-positive HER2-negative breast cancer.

    Published in:
    Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-57419-z
    By:
    • Hohmann, Lennart;
    • Sigurjonsdottir, Kristin;
    • Campos, Ana Bosch;
    • Nacer, Deborah F.;
    • Veerla, Srinivas;
    • Rosengren, Frida;
    • Reddy, Poojaswini Thimmaraya;
    • Häkkinen, Jari;
    • Nordborg, Nicklas;
    • Vallon-Christersson, Johan;
    • Memari, Yasin;
    • Black, Daniella;
    • Bowden, Ramsay;
    • Davies, Helen R.;
    • Borg, Åke;
    • Nik-Zainal, Serena;
    • Staaf, Johan
    Publication type:
    Article
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    A trans‐omics assessment of gene–gene interaction in early‐stage NSCLC.

    Published in:
    Molecular Oncology, 2023, v. 17, n. 1, p. 173, doi. 10.1002/1878-0261.13345
    By:
    • Chen, Jiajin;
    • Song, Yunjie;
    • Li, Yi;
    • Wei, Yongyue;
    • Shen, Sipeng;
    • Zhao, Yang;
    • You, Dongfang;
    • Su, Li;
    • Bjaanæs, Maria Moksnes;
    • Karlsson, Anna;
    • Planck, Maria;
    • Staaf, Johan;
    • Helland, Åslaug;
    • Esteller, Manel;
    • Shen, Hongbing;
    • Christiani, David C.;
    • Zhang, Ruyang;
    • Chen, Feng
    Publication type:
    Article
    7

    Epigenome‐wide three‐way interaction study identifies a complex pattern between TRIM27, KIAA0226, and smoking associated with overall survival of early‐stage NSCLC.

    Published in:
    Molecular Oncology, 2022, v. 16, n. 3, p. 717, doi. 10.1002/1878-0261.13167
    By:
    • Ji, Xinyu;
    • Lin, Lijuan;
    • Fan, Juanjuan;
    • Li, Yi;
    • Wei, Yongyue;
    • Shen, Sipeng;
    • Su, Li;
    • Shafer, Andrea;
    • Bjaanæs, Maria Moksnes;
    • Karlsson, Anna;
    • Planck, Maria;
    • Staaf, Johan;
    • Helland, Åslaug;
    • Esteller, Manel;
    • Zhang, Ruyang;
    • Chen, Feng;
    • Christiani, David C.
    Publication type:
    Article
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    Recurrent gross mutations of the PTEN tumor suppressor gene in breast cancers with deficient DSB repair.

    Published in:
    Nature Genetics, 2008, v. 40, n. 1, p. 102, doi. 10.1038/ng.2007.39
    By:
    • Saal, Lao H.;
    • Gruvberger-Saal, Sofia K.;
    • Persson, Camilla;
    • Lövgren, Kristina;
    • Jumppanen, Mervi;
    • Staaf, Johan;
    • Jönsson, Göran;
    • Pires, Maira M.;
    • Maurer, Matthew;
    • Holm, Karolina;
    • Koujak, Susan;
    • Subramaniyam, Shivakumar;
    • Vallon-Christersson, Johan;
    • Olsson, Håkan;
    • Tao Su;
    • Memeo, Lorenzo;
    • Ludwig, Thomas;
    • Ethier, Stephen P.;
    • Krogh, Morten;
    • Szabolcs, Matthias
    Publication type:
    Article
    18

    Diagnostic gastrointestinal markers in primary lung cancer and pulmonary metastases.

    Published in:
    Virchows Archiv: European Journal of Pathology, 2024, v. 485, n. 2, p. 347, doi. 10.1007/s00428-023-03583-w
    By:
    • Malmros, Karina;
    • Lindholm, Andreas;
    • Vidarsdottir, Halla;
    • Jirström, Karin;
    • Nodin, Björn;
    • Botling, Johan;
    • Mattsson, Johanna S. M.;
    • Micke, Patrick;
    • Planck, Maria;
    • Jönsson, Mats;
    • Staaf, Johan;
    • Brunnström, Hans
    Publication type:
    Article
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    Detecting EGFR alterations in clinical specimens—pitfalls and necessities.

    Published in:
    Virchows Archiv: European Journal of Pathology, 2013, v. 463, n. 6, p. 755, doi. 10.1007/s00428-013-1489-y
    By:
    • Isaksson, Sofi;
    • Bendahl, Pär-Ola;
    • Salomonsson, Annette;
    • Jönsson, Mats;
    • Haglund, Monica;
    • Gaber, Alexander;
    • Jirström, Karin;
    • Jönsson, Per;
    • Borg, Åke;
    • Johansson, Leif;
    • Staaf, Johan;
    • Planck, Maria
    Publication type:
    Article
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    Loss of NF2 defines a genetic subgroup of non‐FOS‐rearranged osteoblastoma.

    Published in:
    Journal of Pathology: Clinical Research, 2020, v. 6, n. 4, p. 231, doi. 10.1002/cjp2.172
    By:
    • Saba, Karim H;
    • Cornmark, Louise;
    • Hofvander, Jakob;
    • Magnusson, Linda;
    • Nilsson, Jenny;
    • Bos, Hilda;
    • Spierings, Diana CJ;
    • Foijer, Floris;
    • Staaf, Johan;
    • Brosjö, Otte;
    • Sumathi, Vaiyapuri P;
    • Lam, Suk Wai;
    • Szuhai, Karoly;
    • Bovée, Judith VMG;
    • Kovac, Michal;
    • Baumhoer, Daniel;
    • Styring, Emelie;
    • Nord, Karolin H
    Publication type:
    Article
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    Genome-Wide DNA Methylation Analysis in Melanoma Reveals the Importance of CpG Methylation in MITF Regulation.

    Published in:
    Journal of Investigative Dermatology, 2015, v. 135, n. 7, p. 1820, doi. 10.1038/jid.2015.61
    By:
    • Lauss, Martin;
    • Haq, Rizwan;
    • Cirenajwis, Helena;
    • Phung, Bengt;
    • Harbst, Katja;
    • Staaf, Johan;
    • Rosengren, Frida;
    • Holm, Karolina;
    • Aine, Mattias;
    • Jirström, Karin;
    • Borg, Åke;
    • Busch, Christian;
    • Geisler, Jürgen;
    • Lønning, Per E;
    • Ringnér, Markus;
    • Howlin, Jillian;
    • Fisher, David E;
    • Jönsson, Göran
    Publication type:
    Article
    28

    Primary Melanoma Tumors from CDKN2A Mutation Carriers Do Not Belong to a Distinct Molecular Subclass.

    Published in:
    Journal of Investigative Dermatology, 2014, v. 134, n. 12, p. 3000, doi. 10.1038/jid.2014.272
    By:
    • Staaf, Johan;
    • Harbst, Katja;
    • Lauss, Martin;
    • Ringnér, Markus;
    • Måsbäck, Anna;
    • Howlin, Jillian;
    • Jirström, Karin;
    • Harland, Mark;
    • Zebary, Abdlsattar;
    • Palmer, Jane M;
    • Ingvar, Christian;
    • Olsson, Håkan;
    • Newton-Bishop, Julia;
    • Hansson, Johan;
    • Hayward, Nicholas;
    • Gruis, Nelleke;
    • Jönsson, Göran
    Publication type:
    Article
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    Characterisation of dic(9;20)(p11–13;q11) in childhood B-cell precursor acute lymphoblastic leukaemia by tiling resolution array-based comparative genomic hybridisation reveals clustered breakpoints at 9p13.2 and 20q11.2.

    Published in:
    British Journal of Haematology, 2006, v. 135, n. 4, p. 492, doi. 10.1111/j.1365-2141.2006.06328.x
    By:
    • Schoumans, Jacqueline;
    • Johansson, Bertil;
    • Corcoran, Martin;
    • Kuchinskaya, Ekaterina;
    • Golovleva, Irina;
    • Grandér, Dan;
    • Forestier, Erik;
    • Staaf, Johan;
    • Borg, Åke;
    • Gustafsson, Britt;
    • Blennow, Elisabeth;
    • Nordgren, Ann
    Publication type:
    Article
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    RNA sequencing-based single sample predictors of molecular subtype and risk of recurrence for clinical assessment of early-stage breast cancer.

    Published in:
    NPJ Breast Cancer, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41523-022-00465-3
    By:
    • Staaf, Johan;
    • Häkkinen, Jari;
    • Hegardt, Cecilia;
    • Saal, Lao H.;
    • Kimbung, Siker;
    • Hedenfalk, Ingrid;
    • Lien, Tonje;
    • Sørlie, Therese;
    • Naume, Bjørn;
    • Russnes, Hege;
    • Marcone, Rachel;
    • Ayyanan, Ayyakkannu;
    • Brisken, Cathrin;
    • Malterling, Rebecka R.;
    • Asking, Bengt;
    • Olofsson, Helena;
    • Lindman, Henrik;
    • Bendahl, Pär-Ola;
    • Ehinger, Anna;
    • Larsson, Christer
    Publication type:
    Article
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    Hyperglucagonemia in youth is associated with high plasma free fatty acids, visceral adiposity, and impaired glucose tolerance.

    Published in:
    Pediatric Diabetes, 2019, v. 20, n. 7, p. 880, doi. 10.1111/pedi.12890
    By:
    • Manell, Hannes;
    • Kristinsson, Hjalti;
    • Kullberg, Joel;
    • Ubhayasekera, Sarojini Jayantha Kumari;
    • Mörwald, Katharina;
    • Staaf, Johan;
    • Cadamuro, Janne;
    • Zsoldos, Fanni;
    • Göpel, Sven;
    • Sargsyan, Ernest;
    • Ahlström, Håkan;
    • Bergquist, Jonas;
    • Weghuber, Daniel;
    • Forslund, Anders;
    • Bergsten, Peter
    Publication type:
    Article
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    A combined gene expression tool for parallel histological prediction and gene fusion detection in non-small cell lung cancer.

    Published in:
    Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-41585-4
    By:
    • Karlsson, Anna;
    • Cirenajwis, Helena;
    • Ericson-Lindquist, Kajsa;
    • Brunnström, Hans;
    • Reuterswärd, Christel;
    • Jönsson, Mats;
    • Ortiz-Villalón, Cristian;
    • Hussein, Aziz;
    • Bergman, Bengt;
    • Vikström, Anders;
    • Monsef, Nastaran;
    • Branden, Eva;
    • Koyi, Hirsh;
    • de Petris, Luigi;
    • Micke, Patrick;
    • Patthey, Annika;
    • Behndig, Annelie F.;
    • Johansson, Mikael;
    • Planck, Maria;
    • Staaf, Johan
    Publication type:
    Article
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