Works by Staaf, Johan
Results: 88
Genomic characterization of the HER2-enriched intrinsic molecular subtype in primary ER-positive HER2-negative breast cancer.
- Published in:
- Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-57419-z
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- Publication type:
- Article
Making breast cancer molecular subtypes robust?
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- 2015
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- Publication type:
- Journal Article
Making Breast Cancer Molecular Subtypes Robust?
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- JNCI: Journal of the National Cancer Institute, 2014, v. 107, n. 1, p. 1, doi. 10.1093/jnci/dju386
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- Publication type:
- Article
Mapping of a Novel Ocular and Cutaneous Malignant Melanoma Susceptibility Locus to Chromosome 9q21.32.
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- JNCI: Journal of the National Cancer Institute, 2005, v. 97, n. 18, p. 1377, doi. 10.1093/jnci/dji280
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- Publication type:
- Article
Tumour immune characterisation of primary triple-negative breast cancer using automated image quantification of immunohistochemistry-stained immune cells.
- Published in:
- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-72306-1
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- Publication type:
- Article
Identification and validation of single-sample breast cancer radiosensitivity gene expression predictors.
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- 2018
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- Publication type:
- journal article
An integrated genomics analysis of epigenetic subtypes in human breast tumors links DNA methylation patterns to chromatin states in normal mammary cells.
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- 2016
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- Publication type:
- journal article
Complement inhibitor CSMD1 modulates epidermal growth factor receptor oncogenic signaling and sensitizes breast cancer cells to chemotherapy.
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- Journal of Experimental & Clinical Cancer Research (17569966), 2021, v. 40, n. 1, p. 1, doi. 10.1186/s13046-021-02042-1
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- Article
Characterisation of dic(9;20)(p11–13;q11) in childhood B-cell precursor acute lymphoblastic leukaemia by tiling resolution array-based comparative genomic hybridisation reveals clustered breakpoints at 9p13.2 and 20q11.2.
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- British Journal of Haematology, 2006, v. 135, n. 4, p. 492, doi. 10.1111/j.1365-2141.2006.06328.x
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- Publication type:
- Article
Diagnostic Value of Insulinoma-Associated Protein 1 (INSM1) and Comparison With Established Neuroendocrine Markers in Pulmonary Cancers: A Comprehensive Study and Review of the Literature.
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- Archives of Pathology & Laboratory Medicine, 2020, v. 144, n. 9, p. 1075, doi. 10.5858/arpa.2019-0250-OA
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- Publication type:
- Article
Cross comparison and prognostic assessment of breast cancer multigene signatures in a large population-based contemporary clinical series.
- Published in:
- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-48570-x
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- Publication type:
- Article
A combined gene expression tool for parallel histological prediction and gene fusion detection in non-small cell lung cancer.
- Published in:
- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-41585-4
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- Publication type:
- Article
A trans‐omics assessment of gene–gene interaction in early‐stage NSCLC.
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- Molecular Oncology, 2023, v. 17, n. 1, p. 173, doi. 10.1002/1878-0261.13345
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- Publication type:
- Article
Epigenome‐wide three‐way interaction study identifies a complex pattern between TRIM27, KIAA0226, and smoking associated with overall survival of early‐stage NSCLC.
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- Molecular Oncology, 2022, v. 16, n. 3, p. 717, doi. 10.1002/1878-0261.13167
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- Publication type:
- Article
Analysis of DNA methylation patterns in the tumor immune microenvironment of metastatic melanoma.
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- Molecular Oncology, 2020, v. 14, n. 5, p. 933, doi. 10.1002/1878-0261.12663
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- Publication type:
- Article
A multi‐omic study reveals BTG2 as a reliable prognostic marker for early‐stage non‐small cell lung cancer.
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- Molecular Oncology, 2018, v. 12, n. 6, p. 913, doi. 10.1002/1878-0261.12204
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- Publication type:
- Article
NF1-mutated melanoma tumors harbor distinct clinical and biological characteristics.
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- Molecular Oncology, 2017, v. 11, n. 4, p. 438, doi. 10.1002/1878-0261.12050
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- Publication type:
- Article
Genome methylation patterns in male breast cancer – Identification of an epitype with hypermethylation of polycomb target genes.
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- Molecular Oncology, 2015, v. 9, n. 8, p. 1565, doi. 10.1016/j.molonc.2015.04.013
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- Publication type:
- Article
Altered Plasma Levels of Glucagon, GLP-1 and Glicentin During OGTT in Adolescents With Obesity and Type 2 Diabetes.
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- 2016
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- Publication type:
- journal article
Isolated 46,XY Gonadal Dysgenesis in Two Sisters Caused by a Xp21.2 Interstitial Duplication Containing the DAX1 Gene.
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- Journal of Clinical Endocrinology & Metabolism, 2007, v. 92, n. 8, p. 3305, doi. 10.1210/jc.2007-0505
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- Publication type:
- Article
Detection and precise mapping of germline rearrangements in BRCA1, BRCA2, MSH2, and MLH1 using zoom-in array comparative genomic hybridization (aCGH).
- Published in:
- Human Mutation, 2008, v. 29, n. 4, p. 555, doi. 10.1002/humu.20678
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- Publication type:
- Article
Effect of polyamine deficiency on proteins involved in Okazaki fragment maturation
- Published in:
- Cell Biology International, 2008, v. 32, n. 12, p. 1467, doi. 10.1016/j.cellbi.2008.08.018
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- Publication type:
- Article
Comprehensive analysis of RNA binding motif protein 3 (RBM3) in non‐small cell lung cancer.
- Published in:
- Cancer Medicine, 2020, v. 9, n. 15, p. 5609, doi. 10.1002/cam4.3149
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- Publication type:
- Article
RET inhibition overcomes resistance to combined CDK4/6 inhibitor and endocrine therapy in ER+ breast cancer.
- Published in:
- Frontiers in Oncology, 2025, p. 1, doi. 10.3389/fonc.2024.1497093
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- Publication type:
- Article
Correction: Complement inhibitor CSMD1 modulates epidermal growth factor receptor oncogenic signaling and sensitizes breast cancer cells to chemotherapy.
- Published in:
- 2023
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- Publication type:
- Correction Notice
EGLN2 DNA methylation and expression interact with HIF1A to affect survival of early-stage NSCLC.
- Published in:
- Epigenetics, 2019, v. 14, n. 2, p. 118, doi. 10.1080/15592294.2019.1573066
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- Publication type:
- Article
Disruption of the TP53 locus in osteosarcoma leads to TP53 promoter gene fusions and restoration of parts of the TP53 signalling pathway.
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- Journal of Pathology, 2024, v. 262, n. 2, p. 147, doi. 10.1002/path.6219
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- Publication type:
- Article
Array-CGH reveals hidden gene dose changes in children with acute lymphoblastic leukaemia and a normal or failed karyotype by G-banding.
- Published in:
- British Journal of Haematology, 2008, v. 140, n. 5, p. 572, doi. 10.1111/j.1365-2141.2007.06917.x
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- Publication type:
- Article
Breast cancer genome and transcriptome integration implicates specific mutational signatures with immune cell infiltration.
- Published in:
- Nature Communications, 2016, v. 7, n. 9, p. 12910, doi. 10.1038/ncomms12910
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- Publication type:
- Article
The topography of mutational processes in breast cancer genomes.
- Published in:
- Nature Communications, 2016, v. 7, n. 5, p. 11383, doi. 10.1038/ncomms11383
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- Publication type:
- Article
The gene expression landscape of breast cancer is shaped by tumor protein p53 status and epithelial-mesenchymal transition.
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- 2012
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- Publication type:
- journal article
Landscape of somatic allelic imbalances and copy number alterations in HER2-amplified breast cancer.
- Published in:
- 2011
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- Publication type:
- journal article
Genome-Wide DNA Methylation Analysis in Melanoma Reveals the Importance of CpG Methylation in MITF Regulation.
- Published in:
- Journal of Investigative Dermatology, 2015, v. 135, n. 7, p. 1820, doi. 10.1038/jid.2015.61
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- Publication type:
- Article
Primary Melanoma Tumors from CDKN2A Mutation Carriers Do Not Belong to a Distinct Molecular Subclass.
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- Journal of Investigative Dermatology, 2014, v. 134, n. 12, p. 3000, doi. 10.1038/jid.2014.272
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- Publication type:
- Article
Diagnostic gastrointestinal markers in primary lung cancer and pulmonary metastases.
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- Virchows Archiv: European Journal of Pathology, 2024, v. 485, n. 2, p. 347, doi. 10.1007/s00428-023-03583-w
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- Publication type:
- Article
Detecting EGFR alterations in clinical specimens—pitfalls and necessities.
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- Virchows Archiv: European Journal of Pathology, 2013, v. 463, n. 6, p. 755, doi. 10.1007/s00428-013-1489-y
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- Publication type:
- Article
Detecting EGFR alterations in clinical specimens-pitfalls and necessities.
- Published in:
- 2013
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- Publication type:
- journal article
Performance of gene expression–based single sample predictors for assessment of clinicopathological subgroups and molecular subtypes in cancers: a case comparison study in non-small cell lung cancer.
- Published in:
- Briefings in Bioinformatics, 2020, v. 21, n. 2, p. 729, doi. 10.1093/bib/bbz008
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- Publication type:
- Article
Analysis of human papillomaviruses and human polyomaviruses in lung cancer from Swedish never-smokers.
- Published in:
- Acta Oncologica, 2020, v. 59, n. 1, p. 28, doi. 10.1080/0284186X.2019.1657588
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- Publication type:
- Article
Pre-operative plasma cell-free circulating tumor DNA and serum protein tumor markers as predictors of lung adenocarcinoma recurrence.
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- Acta Oncologica, 2019, v. 58, n. 8, p. 1079, doi. 10.1080/0284186X.2019.1610573
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- Publication type:
- Article
Detection of submicroscopic constitutional chromosome aberrations in clinical diagnostics: a validation of the practical performance of different array platforms.
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- European Journal of Human Genetics, 2008, v. 16, n. 7, p. 786, doi. 10.1038/ejhg.2008.14
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- Publication type:
- Article
Comprehensive mutational analysis of a cohort of Swedish Cornelia de Lange syndrome patients.
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- European Journal of Human Genetics, 2007, v. 15, n. 2, p. 143, doi. 10.1038/sj.ejhg.5201737
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- Publication type:
- Article
DNA methylation subgroups in melanoma are associated with proliferative and immunological processes.
- Published in:
- BMC Medical Genomics, 2015, v. 8, p. 1, doi. 10.1186/s12920-015-0147-4
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- Publication type:
- Article
Relation between smoking history and gene expression profiles in lung adenocarcinomas.
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- BMC Medical Genomics, 2012, v. 5, n. 1, p. 22, doi. 10.1186/1755-8794-5-22
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- Publication type:
- Article
Normalization of array-CGH data: influence of copy number imbalances.
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- BMC Genomics, 2007, v. 8, p. 382, doi. 10.1186/1471-2164-8-382
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- Publication type:
- Article
Non-coding antisense transcription detected by conventional and single-stranded cDNA microarray.
- Published in:
- BMC Genomics, 2007, v. 8, p. 295, doi. 10.1186/1471-2164-8-295
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- Publication type:
- Article
Kataegis in clinical and molecular subgroups of primary breast cancer.
- Published in:
- NPJ Breast Cancer, 2024, v. 10, n. 1, p. 1, doi. 10.1038/s41523-024-00640-8
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- Publication type:
- Article
Perturbation and stability of PAM50 subtyping in population-based primary invasive breast cancer.
- Published in:
- NPJ Breast Cancer, 2023, v. 9, n. 1, p. 1, doi. 10.1038/s41523-023-00589-0
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- Publication type:
- Article
RNA sequencing-based single sample predictors of molecular subtype and risk of recurrence for clinical assessment of early-stage breast cancer.
- Published in:
- NPJ Breast Cancer, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41523-022-00465-3
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- Publication type:
- Article
Correction to: Molecular analyses of triple-negative breast cancer in the young and elderly.
- Published in:
- 2021
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- Publication type:
- corrected article