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How hydrophobicity, side chains, and salt affect the dimensions of disordered proteins.
- Published in:
- Protein Science: A Publication of the Protein Society, 2024, v. 33, n. 5, p. 1, doi. 10.1002/pro.4986
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- Article
Folding of prestin's anion-binding site and the mechanism of outer hair cell electromotility.
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- eLife, 2023, p. 1, doi. 10.7554/eLife.89635
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- Article
Factors That Control the Force Needed to Unfold a Membrane Protein in Silico Depend on the Mode of Denaturation.
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- International Journal of Molecular Sciences, 2023, v. 24, n. 3, p. 2654, doi. 10.3390/ijms24032654
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- Article
Development of in vivo HDX‐MS with applications to a TonB‐dependent transporter and other proteins.
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- Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 9, p. 1, doi. 10.1002/pro.4402
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- Article
Structural basis for adhesion G protein-coupled receptor Gpr126 function.
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- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-019-14040-1
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- Article
Trajectory-based training enables protein simulations with accurate folding and Boltzmann ensembles in cpu-hours.
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- PLoS Computational Biology, 2018, v. 14, n. 12, p. 1, doi. 10.1371/journal.pcbi.1006578
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- Article
Accurate calculation of side chain packing and free energy with applications to protein molecular dynamics.
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- PLoS Computational Biology, 2018, v. 14, n. 12, p. 1, doi. 10.1371/journal.pcbi.1006342
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- Article
The Pentablock Amphiphilic Copolymer T1107 Prevents Aggregation of Denatured and Reduced Lysozyme.
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- Macromolecular Bioscience, 2017, v. 17, n. 2, p. n/a, doi. 10.1002/mabi.201600217
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- Article
Aromatic claw: A new fold with high aromatic content that evades structural prediction.
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- Protein Science: A Publication of the Protein Society, 2017, v. 26, n. 2, p. 208, doi. 10.1002/pro.3069
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- Article
Introduction of a polar core into the de novo designed protein Top7.
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- Protein Science: A Publication of the Protein Society, 2016, v. 25, n. 7, p. 1299, doi. 10.1002/pro.2899
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- Article
Factors That Control the Chemistry of the LOV Domain Photocycle.
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- PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0087074
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- Article
A 'Link-Psi' strategy using crosslinking indicates that the folding transition state of ubiquitin is not very malleable.
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- Protein Science: A Publication of the Protein Society, 2012, v. 21, n. 6, p. 819, doi. 10.1002/pro.2065
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- Article
TULIPs: tunable, light-controlled interacting protein tags for cell biology.
- Published in:
- Nature Methods, 2012, v. 9, n. 4, p. 379, doi. 10.1038/nmeth.1904
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- Article
On Docking, Scoring and Assessing Protein-DNA Complexes in a Rigid-Body Framework.
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- PLoS ONE, 2012, v. 7, n. 2, p. 1, doi. 10.1371/journal.pone.0032647
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- Article
Modeling large regions in proteins: Applications to loops, termini, and folding.
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- Protein Science: A Publication of the Protein Society, 2012, v. 21, n. 1, p. 107, doi. 10.1002/pro.767
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- Article
Rationally improving LOV domain-based photoswitches.
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- Nature Methods, 2010, v. 7, n. 8, p. 623, doi. 10.1038/nmeth.1473
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- Article
Protein structure prediction enhanced with evolutionary diversity: SPEED.
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- Protein Science: A Publication of the Protein Society, 2010, v. 19, n. 3, p. 520, doi. 10.1002/pro.330
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- Article
Kinetic barriers and the role of topology in protein and RNA folding.
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- Protein Science: A Publication of the Protein Society, 2008, v. 17, n. 8, p. 1308, doi. 10.1110/ps.036319.108
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- Article
Reduced C<sub>β</sub> statistical potentials can outperform all-atom potentials in decoy identification.
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- Protein Science: A Publication of the Protein Society, 2007, v. 16, n. 10, p. 2123, doi. 10.1110/ps.072939707
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- Article
Methods for the accurate estimation of confidence intervals on protein folding φ-values.
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- Protein Science: A Publication of the Protein Society, 2006, v. 15, n. 10, p. 2257, doi. 10.1110/ps.062230106
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- Article
PII structure in the model peptides for unfolded proteins: Studies on ubiquitin fragments and several alanine-rich peptides containing QQQ, SSS, FFF, and VVV.
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- Proteins, 2006, v. 63, n. 2, p. 312, doi. 10.1002/prot.20788
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- Article
On the precision of experimentally determined protein folding rates and ϕ-values.
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- Protein Science: A Publication of the Protein Society, 2006, v. 15, n. 3, p. 553, doi. 10.1110/ps.051870506
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- Article
Getting hotter with RNA.
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- Nature Structural Biology, 2002, v. 9, n. 11, p. 795, doi. 10.1038/nsb1102-795
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- Article
Distinguishing foldable proteins from nonfolders: When and how do they differ?
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- Proteins, 2002, v. 49, n. 1, p. 15, doi. 10.1002/prot.10193
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- Article
Entropic benefit of a cross-link in protein association.
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- Proteins, 2002, v. 48, n. 2, p. 341, doi. 10.1002/prot.10165
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- Article
Understanding protein hydrogen bond formation with kinetic H/D amide isotope effects.
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- Nature Structural Biology, 2002, v. 9, n. 6, p. 458, doi. 10.1038/nsb794
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- Article
Engineered metal binding sites map the heterogeneous folding landscape of a coiled coil.
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- Nature Structural Biology, 2001, v. 8, n. 12, p. 1042, doi. 10.1038/nsb723
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- Article
D/H amide kinetic isotope effects reveal when hydrogen bonds form during protein folding.
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- Nature Structural Biology, 2000, v. 7, n. 1, p. 62
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- Article
Mg<sup>2+</sup>-dependent folding of a large ribozyme without kinetic traps.
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- Nature Structural Biology, 1999, v. 6, n. 12, p. 1091
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- Article
The burst phase in ribonuclease A folding and solvent dependence of the unfolded state.
- Published in:
- Nature Structural Biology, 1998, v. 5, n. 10, p. 882, doi. 10.1038/2321
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- Article
Molecular collapse: The rate-limiting step in two-state cytochrome c folding.
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- Proteins, 1996, v. 24, n. 4, p. 413, doi. 10.1002/(SICI)1097-0134(199604)24:4<413::AID-PROT1>3.0.CO;2-F
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- Article
The role of helix formation in the folding of a fully α-helical coiled coil.
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- Proteins, 1996, v. 24, n. 4, p. 427, doi. 10.1002/(SICI)1097-0134(199604)24:4<427::AID-PROT2>3.0.CO;2-B
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- Article