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ABC-GWAS: Functional Annotation of Estrogen Receptor-Positive Breast Cancer Genetic Variants.
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- Frontiers in Genetics, 2020, v. 11, p. 1, doi. 10.3389/fgene.2020.00730
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- Article
Quantitative analysis and prediction of G-quadruplex forming sequences in double-stranded DNA.
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- Nucleic Acids Research, 2016, v. 44, n. 10, p. 4807, doi. 10.1093/nar/gkw272
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- Article
Categorical spectral analysis of periodicity in nucleosomal DNA.
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- Nucleic Acids Research, 2016, v. 44, n. 5, p. 2047, doi. 10.1093/nar/gkw101
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- Article
HiTSelect: a comprehensive tool for high-complexity-pooled screen analysis.
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- Nucleic Acids Research, 2015, v. 43, n. 3, p. e16, doi. 10.1093/nar/gku1197
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- Article
Quantifying the role of steric constraints in nucleosome positioning.
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- Nucleic Acids Research, 2014, v. 42, n. 4, p. 2147, doi. 10.1093/nar/gkt1239
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- Article
Categorical spectral analysis of periodicity in human and viral genomes.
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- Nucleic Acids Research, 2013, v. 41, n. 3, p. 1395, doi. 10.1093/nar/gks1261
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- Article
Chd1 protects genome integrity at promoters to sustain hypertranscription in embryonic stem cells.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25088-3
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- Article
High-throughput mapping of the chromatin structure of human promoters.
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- Nature Biotechnology, 2007, v. 25, n. 2, p. 244, doi. 10.1038/nbt1279
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- Article
Normalization, bias correction, and peak calling for ChIP-seq.
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- Statistical Applications in Genetics & Molecular Biology, 2012, v. 11, n. 3, p. 1, doi. 10.1515/1544-6115.1750
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- Article
Spectral clustering of single-cell multi-omics data on multilayer graphs.
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- Bioinformatics, 2022, v. 38, n. 14, p. 3600, doi. 10.1093/bioinformatics/btac378
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- Article
The Cancer Genome Atlas Analysis Predicts MicroRNA for Targeting Cancer Growth and Vascularization in Glioblastoma.
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- Molecular Therapy, 2015, v. 23, n. 7, p. 1234, doi. 10.1038/mt.2015.72
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- Article
Single-Cell Transcriptomics Reveals Spatial and Temporal Turnover of Keratinocyte Differentiation Regulators.
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- Frontiers in Genetics, 2019, p. 1, doi. 10.3389/fgene.2019.00775
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- Article
The Cancer-Associated Genetic Variant Rs3903072 Modulates Immune Cells in the Tumor Microenvironment.
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- Frontiers in Genetics, 2019, p. 1, doi. 10.3389/fgene.2019.00754
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- Article
Somatic cells regulate maternal mRNA translation and developmental competence of mouse oocytes.
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- Nature Cell Biology, 2013, v. 15, n. 12, p. 1415, doi. 10.1038/ncb2873
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- Article
Incomplete DNA methylation underlies a transcriptional memory of somatic cells in human iPS cells.
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- Nature Cell Biology, 2011, v. 13, n. 5, p. 541, doi. 10.1038/ncb2239
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- Article
Functional analysis of low-grade glioma genetic variants predicts key target genes and transcription factors.
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- Neuro-Oncology, 2021, v. 23, n. 4, p. 638, doi. 10.1093/neuonc/noaa248
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- Publication type:
- Article
Adult diffuse glioma GWAS by molecular subtype identifies variants in D2HGDH and FAM20C.
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- Neuro-Oncology, 2020, v. 22, n. 11, p. 1602, doi. 10.1093/neuonc/noaa117
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- Article
CLONAL EVOLUTION OF GLIOMAS IS ENCODED IN THE EVOLUTIONARY DYNAMICS OF DNA METHYLATION.
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- Neuro-Oncology, 2014, v. 16, n. suppl_3, p. iii51, doi. 10.1093/neuonc/nou209.38
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- Publication type:
- Article
Sequence features accurately predict genome-wide MeCP2 binding in vivo.
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- Nature Communications, 2016, v. 7, n. 3, p. 11025, doi. 10.1038/ncomms11025
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- Article
CHANCE: comprehensive software for quality control and validation of ChIP-seq data.
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- Genome Biology, 2012, v. 13, n. 10, p. R98, doi. 10.1186/gb-2012-13-10-r98
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- Article
Build-up and surface dose measurements on phantoms using micro-MOSFET in 6 and 10 MV x-ray beams and comparisons with Monte Carlo calculations.
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- Medical Physics, 2007, v. 34, n. 4, p. 1266, doi. 10.1118/1.2710951
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- Article
A comparative study of rectal dose histograms in prostate brachytherapy: Some analytic and numerical results .
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- Medical Physics, 2005, v. 32, n. 2, p. 437
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- Article
Leveraging epigenomes and three-dimensional genome organization for interpreting regulatory variation.
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- PLoS Computational Biology, 2023, v. 19, n. 7, p. 1, doi. 10.1371/journal.pcbi.1011286
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- Article
Transcription Factor Tfe3 Directly Regulates Pgc-1alpha in Muscle.
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- Journal of Cellular Physiology, 2015, v. 230, n. 10, p. 2330, doi. 10.1002/jcp.24978
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- Article
Microarray blob-defect removal improves array analysis.
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- Bioinformatics, 2007, v. 23, n. 8, p. 966, doi. 10.1093/bioinformatics/btm043
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- Article
Epigenetic engineering of yeast reveals dynamic molecular adaptation to methylation stress and genetic modulators of specific DNMT3 family members.
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- Nucleic Acids Research, 2020, v. 48, n. 8, p. 4081, doi. 10.1093/nar/gkaa161
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- Article
CRISPR-SKIP: programmable gene splicing with single base editors.
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- Genome Biology, 2018, v. 19, n. 1, p. N.PAG, doi. 10.1186/s13059-018-1482-5
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- Article
YY1 Regulates Melanocyte Development and Function by Cooperating with MITF.
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- PLoS Genetics, 2012, v. 8, n. 5, p. 1, doi. 10.1371/journal.pgen.1002688
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- Article
Polycomb-Like 3 Promotes Polycomb Repressive Complex 2 Binding to CpG Islands and Embryonic Stem Cell Self-Renewal.
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- PLoS Genetics, 2012, v. 8, n. 3, p. 1, doi. 10.1371/journal.pgen.1002576
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- Article
Chromatin structure and context-dependent sequence features control prime editing efficiency.
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- Frontiers in Genetics, 2024, p. 1, doi. 10.3389/fgene.2023.1222112
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- Article
Chromatin structure and context-dependent sequence features control prime editing efficiency.
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- Frontiers in Genetics, 2023, p. 1, doi. 10.3389/fgene.2023.1222112
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- Article
Predicting TCR-Epitope Binding Specificity Using Deep Metric Learning and Multimodal Learning.
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- Genes, 2021, v. 12, n. 4, p. 572, doi. 10.3390/genes12040572
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- Article
Local genomic features predict the distinct and overlapping binding patterns of the bHLH‐Zip family oncoproteins MITF and MYC‐MAX.
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- Pigment Cell & Melanoma Research, 2019, v. 32, n. 4, p. 500, doi. 10.1111/pcmr.12762
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- Article
SequencEnG: an interactive knowledge base of sequencing techniques.
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- Bioinformatics, 2019, v. 35, n. 8, p. 1438, doi. 10.1093/bioinformatics/bty794
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- Article
TeachEnG: a Teaching Engine for Genomics.
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- Bioinformatics, 2017, v. 33, n. 20, p. 3296, doi. 10.1093/bioinformatics/btx447
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- Article
Author Correction: Targeted exon skipping with AAV-mediated split adenine base editors.
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- 2019
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- Correction Notice
Targeted exon skipping with AAV-mediated split adenine base editors.
- Published in:
- Cell Discovery, 2019, v. 5, n. 1, p. N.PAG, doi. 10.1038/s41421-019-0109-7
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- Article
Corrigendum: Chromatin structure and context-dependent sequence features control prime editing efficiency.
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- Frontiers in Genetics, 2024, p. 1, doi. 10.3389/fgene.2024.1391923
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- Publication type:
- Article
Maximum entropy methods for extracting the learned features of deep neural networks.
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- PLoS Computational Biology, 2017, v. 13, n. 10, p. 1, doi. 10.1371/journal.pcbi.1005836
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- Article