Works by Smith, Erin N.

Results: 28

GeneEnvironment Interaction in Yeast Gene Expression.

Published in:

PLoS Biology, 2008, v. 6, n. 4, p. e83, doi. 10.1371/journal.pbio.0060083

By:

Smith, Erin N.;
Kruglyak, Leonid

Publication type:

Article

A large‐scale exome array analysis of venous thromboembolism.

Published in:

Genetic Epidemiology, 2019, v. 43, n. 4, p. 449, doi. 10.1002/gepi.22187

By:

Lindström, Sara;
Brody, Jennifer A.;
Turman, Constance;
Germain, Marine;
Bartz, Traci M.;
Smith, Erin N.;
Chen, Ming‐Huei;
Puurunen, Marja;
Chasman, Daniel;
Hassler, Jeffrey;
Pankratz, Nathan;
Basu, Saonli;
Guan, Weihua;
Gyorgy, Beata;
Ibrahim, Manal;
Empana, Jean‐Philippe;
Olaso, Robert;
Jackson, Rebecca;
Brækkan, Sigrid K.;
McKnight, Barbara

Publication type:

Article

Maternal Depressive Symptoms and Child Behavior Problems Among Latina Adolescent Mothers: The Buffering Effect of Mother-Reported Partner Child Care Involvement.

Published in:

Merrill-Palmer Quarterly: Journal of Developmental Psychology, 2013, v. 59, n. 3, p. 304, doi. 10.13110/merrpalmquar1982.59.3.0304

By:

Smith, Erin N.;
Grau, Josefina M.;
Duran, Petra A.;
Castellanos, Patricia

Publication type:

Article

Identification of high-confidence somatic mutations in whole genome sequence of formalin-fixed breast cancer specimens.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 14, p. e107, doi. 10.1093/nar/gks299

By:

Yost, Shawn E.;
Smith, Erin N.;
Schwab, Richard B.;
Bao, Lei;
Jung, HyunChul;
Wang, Xiaoyun;
Voest, Emile;
Pierce, John P.;
Messer, Karen;
Parker, Barbara A.;
Harismendy, Olivier;
Frazer, Kelly A.

Publication type:

Article

Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks.

Published in:

Nature Genetics, 2008, v. 40, n. 7, p. 854, doi. 10.1038/ng.167

By:

Jun Zhu;
Bin Zhang;
Smith, Erin N.;
Drees, Becky;
Brem, Rachel B.;
Kruglyak, Leonid;
Bumgarner, Roger E.;
Schadt, Eric E.

Publication type:

Article

Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors.

Published in:

Nature Genetics, 2003, v. 35, n. 1, p. 57, doi. 10.1038/ng1222

By:

Yvert, Gaël;
Brem, Rachel B.;
Whittle, Jacqueline;
Akey, Joshua M.;
Foss, Eric;
Smith, Erin N.;
Mackelprang, Rachel;
Kruglyak, Leonid

Publication type:

Article

Genome-Wide Association of Bipolar Disorder Suggests an Enrichment of Replicable Associations in Regions near Genes.

Published in:

PLoS Genetics, 2011, v. 7, n. 6, p. 1, doi. 10.1371/journal.pgen.1002134

By:

Smith, Erin N.;
Koller, Daniel L.;
Panganiban, Corrie;
Szelinger, Szabolcs;
Peng Zhang;
Badner, Judith A.;
Barrett, Thomas B.;
Berrettini, Wade H.;
Bloss, Cinnamon S.;
Byerley, William;
Coryell, William;
Edenberg, Howard J.;
Foroud, Tatiana;
Gershon, Elliot S.;
Greenwood, Tiffany A.;
Yiran Guo;
Hipolito, Maria;
Keating, Brendan J.;
Lawson, William B.;
Chunyu Liu

Publication type:

Article

Plasma neurofilament light levels show elevation two years prior to diagnosis of amyotrophic lateral sclerosis in the UK Biobank.

Published in:

Amyotrophic Lateral Sclerosis & Frontotemporal Degeneration, 2024, v. 25, n. 1/2, p. 170, doi. 10.1080/21678421.2023.2285428

By:

Smith, Erin N.;
Lee, Jonghun;
Prilutsky, Daria;
Zicha, Stephen;
Wang, Zemin;
Han, Steve;
Zach, Neta

Publication type:

Article

Pgltools: a genomic arithmetic tool suite for manipulation of Hi-C peak and other chromatin interaction data.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1621-0

By:

Greenwald, William W.;
He Li;
Smith, Erin N.;
Benaglio, Paola;
Nariai, Naoki;
Frazer, Kelly A.

Publication type:

Article

Effective filtering strategies to improve data quality from population-based whole exome sequencing studies.

Published in:

BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-125

By:

Carson, Andrew R.;
Smith, Erin N.;
Matsui, Hiroko;
Brækkan, Sigrid K.;
Jepsen, Kristen;
Hansen, John-Bjarne;
Frazer, Kelly A.

Publication type:

Article

Microarray data mining: A novel optimization-based approach to uncover biologically coherent structures.

Published in:

BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-268

By:

Tan, Meng P.;
Smith, Erin N.;
Broach, James R.;
Floudas, Christodoulos A.

Publication type:

Article

TAK-994 mechanistic investigation into drug-induced liver injury.

Published in:

Toxicological Sciences, 2025, v. 204, n. 2, p. 143, doi. 10.1093/toxsci/kfaf003

By:

Shinozawa, Tadahiro;
Miyamoto, Kazumasa;
Baker, Kevin S;
Faber, Samantha C;
Flores, Ramon;
Uetrecht, Jack;
Hehn, Christian von;
Yukawa, Tomoya;
Tohyama, Kimio;
Kadali, Harisha;
Grotthuss, Marcin von;
Sudo, Yusuke;
Smith, Erin N;
Diogo, Dorothée;
Zhu, Andy Z X;
Dragan, Yvonne;
Cebers, Gvido;
Wagoner, Matthew P

Publication type:

Article

Correction to: Assessing the causal relationship between obesity and venous thromboembolism through a Mendelian Randomization study.

Published in:

2018

By:

Lindström, Sara;
Germain, Marine;
Crous-Bou, Marta;
Smith, Erin N.;
Morange, Pierre-Emmanuel;
van Hylckama Vlieg, Astrid;
de Haan, Hugoline G.;
Chasman, Daniel;
Ridker, Paul;
Brody, Jennifer;
de Andrade, Mariza;
Heit, John A.;
Tang, Weihong;
De Vivo, Immaculata;
Grodstein, Francine;
Smith, Nicholas L.;
Tregouet, David;
Kabrhel, Christopher;
for the INVENT Consortium

Publication type:

Correction Notice

Biased estimates of clonal evolution and subclonal heterogeneity can arise from PCR duplicates in deep sequencing experiments.

Published in:

Genome Biology, 2014, v. 15, n. 7, p. 1, doi. 10.1186/s13059-014-0420-4

By:

Smith, Erin N.;
Jepsen, Kristen;
Khosroheidari, Mahdieh;
Rassenti, Laura Z.;
D'Antonio, Matteo;
Ghia, Emanuela M.;
Carson, Dennis A.;
Jamieson, Catriona H. M.;
Kipps, Thomas J.;
Frazer, Kelly F.

Publication type:

Article

Genetic ancestry of participants in the National Children's Study.

Published in:

Genome Biology, 2014, v. 15, n. 1, p. R22, doi. 10.1186/gb-2014-15-2-r22

By:

Smith, Erin N.;
Jepsen, Kristen;
Arias, Angelo D.;
Shepard, Peter J.;
Chambers, Christina D.;
Frazer, Kelly A.

Publication type:

Article

Properties of structural variants and short tandem repeats associated with gene expression and complex traits.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16482-4

By:

Jakubosky, David;
D'Antonio, Matteo;
Bonder, Marc Jan;
Smail, Craig;
Donovan, Margaret K. R.;
Young Greenwald, William W.;
Matsui, Hiroko;
i2QTL Consortium;
Bonder, Marc J.;
Cai, Na;
Carcamo-Orive, Ivan;
Frazer, Kelly A.;
Young Greenwald, William W.;
Knowles, Joshua W.;
McCarthy, Davis J.;
Mirauta, Bogdan A.;
Montgomery, Stephen B.;
Quertermous, Thomas;
Seaton, Daniel D.;
Smith, Erin N.

Publication type:

Article

Discovery and quality analysis of a comprehensive set of structural variants and short tandem repeats.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16481-5

By:

Jakubosky, David;
Smith, Erin N.;
D'Antonio, Matteo;
Jan Bonder, Marc;
Young Greenwald, William W.;
D'Antonio-Chronowska, Agnieszka;
Matsui, Hiroko;
i2QTL Consortium;
Bonder, Marc J.;
Cai, Na;
Carcamo-Orive, Ivan;
Frazer, Kelly A.;
Knowles, Joshua W.;
McCarthy, Davis J.;
Mirauta, Bogdan A.;
Montgomery, Stephen B.;
Quertermous, Thomas;
Seaton, Daniel D.;
Smail, Craig;
Stegle, Oliver

Publication type:

Article

Whole Transcriptome Sequencing Enables Discovery and Analysis of Viruses in Archived Primary Central Nervous System Lymphomas.

Published in:

PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0073956

By:

DeBoever, Christopher;
Reid, Erin G.;
Smith, Erin N.;
Wang, Xiaoyun;
Dumaop, Wilmar;
Harismendy, Olivier;
Carson, Dennis;
Richman, Douglas;
Masliah, Eliezer;
Frazer, Kelly A.

Publication type:

Article

High-Resolution Mutational Profiling Suggests the Genetic Validity of Glioblastoma Patient-Derived Pre-Clinical Models.

Published in:

PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0056185

By:

Yost, Shawn E.;
Pastorino, Sandra;
Rozenzhak, Sophie;
Smith, Erin N.;
Chao, Ying S.;
Jiang, Pengfei;
Kesari, Santosh;
Frazer, Kelly A.;
Harismendy, Olivier

Publication type:

Article

Longitudinal Replication Studies of GWAS Risk SNPs Influencing Body Mass Index over the Course of Childhood and Adulthood.

Published in:

PLoS ONE, 2012, v. 7, n. 2, p. 1, doi. 10.1371/journal.pone.0031470

By:

Hao Mei;
Wei Chen;
Fan Jiang;
Jiang He;
Sathanur Srinivasan;
Smith, Erin N.;
Schork, Nicholas;
Murray, Sarah;
Berenson, Gerald S.

Publication type:

Article

Genetic Profiling Using Genome-Wide Significant Coronary Artery Disease Risk Variants Does Not Improve the Prediction of Subclinical Atherosclerosis: The Cardiovascular Risk in Young Finns Study, the Bogalusa Heart Study and the Health 2000 Survey - A Meta-Analysis of Three Independent Studies

Published in:

PLoS ONE, 2012, v. 7, n. 1, p. 1, doi. 10.1371/journal.pone.0028931

By:

Hernesniemi, Jussi A.;
Seppälä, Ilkka;
Lyytikäinen, Leo-Pekka;
Mononen, Nina;
Oksala, Niku;
Hutri-Kähönen, Nina;
Juonala, Markus;
Taittonen, Leena;
Smith, Erin N.;
Schork, Nicholas J.;
Wei Chen;
Srinivasan, Sathanur R.;
Berenson, Gerald S.;
Murray, Sarah S.;
Laitinen, Tomi;
Jula, Antti;
Kettunen, Johannes;
Ripatti, Samuli;
Laaksonen, Reijo;
Viikari, Jorma

Publication type:

Article

Genome-Wide Association of Implantable Cardioverter-Defibrillator Activation With Life-Threatening Arrhythmias.

Published in:

PLoS ONE, 2012, v. 7, n. 1, p. 1, doi. 10.1371/journal.pone.0025387

By:

Murray, Sarah S.;
Smith, Erin N.;
Villarasa, Nikki;
Nahey, Tara;
Lande, Jeff;
Goldberg, Harold;
Shaw, Marian;
Rosenthal, Lawrence;
Ramza, Brian;
Alaeddini, Jamshid;
Xinqiang Han;
Damani, Samir;
Soykan, Orhan;
Kowal, Robert C.;
Topol, Eric J.

Publication type:

Article

Investigation of genetic determinants of cognitive change in later life.

Published in:

Translational Psychiatry, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41398-023-02726-6

By:

Mahedy, Liam;
Anderson, Emma L.;
Tilling, Kate;
Thornton, Zak A.;
Elmore, Andrew R.;
Szalma, Sándor;
Simen, Arthur;
Culp, Meredith;
Zicha, Stephen;
Harel, Brian T.;
Davey Smith, George;
Smith, Erin N.;
Paternoster, Lavinia

Publication type:

Article

Fine-mapping, novel loci identification, and SNP association transferability in a genome-wide association study of QRS duration in African Americans.

Published in:

Human Molecular Genetics, 2016, v. 25, n. 19, p. 4350, doi. 10.1093/hmg/ddw284

By:

Evans, Daniel S.;
Avery, Christy L.;
Nalls, Mike A.;
Guo Li;
Barnard, John;
Smith, Erin N.;
Toshiko Tanaka;
Butler, Anne M.;
Buxbaum, Sarah G.;
Alonso, Alvaro;
Arking, Dan E.;
Berenson, Gerald S.;
Bis, Joshua C.;
Buyske, Steven;
Carty, Cara L.;
Wei Chen;
Chung, Mina K.;
Cummings, Steven R.;
Deo, Rajat;
Eaton, Charles B.

Publication type:

Article

Loci influencing blood pressure identified using a cardiovascular gene-centric array.

Published in:

Human Molecular Genetics, 2013, v. 22, n. 16, p. 3394

By:

Ganesh, Santhi K.;
Tragante, Vinicius;
Guo, Wei;
Guo, Yiran;
Lanktree, Matthew B.;
Smith, Erin N.;
Johnson, Toby;
Castillo, Berta Almoguera;
Barnard, John;
Baumert, Jens;
Chang, Yen-Pei Christy;
Elbers, Clara C.;
Farrall, Martin;
Fischer, Mary E.;
Franceschini, Nora;
Gaunt, Tom R.;
Gho, Johannes M.I.H.;
Gieger, Christian;
Gong, Yan;
Isaacs, Aaron

Publication type:

Article

Genome-wide association study of age at menarche in African-American women.

Published in:

Human Molecular Genetics, 2013, v. 22, n. 16, p. 3329, doi. 10.1093/hmg/ddt181

By:

Demerath, Ellen W.;
Liu, Ching-Ti;
Franceschini, Nora;
Chen, Gary;
Palmer, Julie R.;
Smith, Erin N.;
Chen, Christina T.L.;
Ambrosone, Christine B.;
Arnold, Alice M.;
Bandera, Elisa V.;
Berenson, Gerald S.;
Bernstein, Leslie;
Britton, Angela;
Cappola, Anne R.;
Carlson, Christopher S.;
Chanock, Stephen J.;
Chen, Wei;
Chen, Zhao;
Deming, Sandra L.;
Elks, Cathy E.

Publication type:

Article

Loci influencing blood pressure identified using a cardiovascular gene-centric array.

Published in:

Human Molecular Genetics, 2013, v. 22, n. 8, p. 1663

By:

Ganesh, Santhi K.;
Tragante, Vinicius;
Guo, Wei;
Guo, Yiran;
Lanktree, Matthew B.;
Smith, Erin N.;
Johnson, Toby;
Castillo, Berta Almoguera;
Barnard, John;
Baumert, Jens;
Chang, Yen-Pei Christy;
Elbers, Clara C.;
Farrall, Martin;
Fischer, Mary E.;
Franceschini, Nora;
Gaunt, Tom R.;
Gho, Johannes M.I.H.;
Gieger, Christian;
Gong, Yan;
Isaacs, Aaron

Publication type:

Article

Subtle changes in chromatin loop contact propensity are associated with differential gene regulation and expression.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-08940-5

By:

Greenwald, William W.;
Li, He;
Benaglio, Paola;
Jakubosky, David;
Matsui, Hiroko;
Schmitt, Anthony;
Selvaraj, Siddarth;
D'Antonio, Matteo;
D'Antonio-Chronowska, Agnieszka;
Smith, Erin N.;
Frazer, Kelly A.

Publication type:

Article