Works by Smid, Marcel

Results: 79

PI3 kinase mutations and mutational load as poor prognostic markers in diffuse glioma patients.

Published in:

Acta Neuropathologica Communications, 2015, v. 3, p. 1, doi. 10.1186/s40478-015-0265-4

By:

Draaisma, Kaspar;
Wijnenga, Maarten M. J.;
Weenink, Bas;
Gao, Ya;
Smid, Marcel;
Robe, P.;
van den Bent, Martin J.;
French, Pim J.

Publication type:

Article

Genomic Alterations Associated with Estrogen Receptor Pathway Activity in Metastatic Breast Cancer Have a Differential Impact on Downstream ER Signaling.

Published in:

Cancers, 2023, v. 15, n. 17, p. 4416, doi. 10.3390/cancers15174416

By:

Angus, Lindsay;
Smid, Marcel;
Wilting, Saskia M.;
Bos, Manouk K.;
Steeghs, Neeltje;
Konings, Inge R. H. M.;
Tjan-Heijnen, Vivianne C. G.;
van Riel, Johanna M. G. H.;
van de Wouw, Agnes J.;
Cuppen, Edwin;
Lolkema, Martijn P.;
Jager, Agnes;
Sleijfer, Stefan;
Martens, John W. M.

Publication type:

Article

Circular RNA in Chemonaive Lymph Node Negative Colon Cancer Patients.

Published in:

Cancers, 2021, v. 13, n. 8, p. 1903, doi. 10.3390/cancers13081903

By:

van den Berg, Inge;
Smid, Marcel;
Coebergh van den Braak, Robert R. J.;
van Deurzen, Carolien H. M.;
de Weerd, Vanja;
Foekens, John A.;
IJzermans, Jan N. M.;
Martens, John W. M.;
Wilting, Saskia M.;
Kontos, Christos K.

Publication type:

Article

ER and PI3K Pathway Activity in Primary ER Positive Breast Cancer Is Associated with Progression-Free Survival of Metastatic Patients under First-Line Tamoxifen.

Published in:

Cancers, 2020, v. 12, n. 4, p. 802, doi. 10.3390/cancers12040802

By:

M. Sieuwerts, Anieta;
A. Inda, Márcia;
Smid, Marcel;
van Ooijen, Henk;
van de Stolpe, Anja;
Martens, John W. M.;
Verhaegh, Wim F. J.

Publication type:

Article

Circulating Tumor Cell Enumeration and Characterization in Metastatic Castration-Resistant Prostate Cancer Patients Treated with Cabazitaxel.

Published in:

Cancers, 2019, v. 11, n. 8, p. 1212, doi. 10.3390/cancers11081212

By:

de Kruijff, Ingeborg E.;
Sieuwerts, Anieta M.;
Onstenk, Wendy;
Kraan, Jaco;
Smid, Marcel;
Van, Mai N.;
van der Vlugt-Daane, Michelle;
Oomen-de Hoop, Esther;
Mathijssen, Ron H.J.;
Lolkema, Martijn P.;
de Wit, Ronald;
Hamberg, Paul;
Meulenbeld, Hielke J.;
Beeker, Aart;
Creemers, Geert-Jan;
Martens, John W.M.;
Sleijfer, Stefan

Publication type:

Article

Integrative whole-genome and transcriptome analysis of HER2-amplified metastatic breast cancer.

Published in:

Breast Cancer Research, 2023, v. 25, n. 1, p. 1, doi. 10.1186/s13058-023-01743-z

By:

Verschoor, Noortje;
Smid, Marcel;
Jager, Agnes;
Sleijfer, Stefan;
Wilting, Saskia M.;
Martens, John W. M.

Publication type:

Article

A panel of DNA methylation markers for the classification of consensus molecular subtypes 2 and 3 in patients with colorectal cancer.

Published in:

Molecular Oncology, 2021, v. 15, n. 12, p. 3348, doi. 10.1002/1878-0261.13098

By:

van den Berg, Inge;
Smid, Marcel;
Coebergh van den Braak, Robert R. J.;
van de Wiel, Mark A.;
van Deurzen, Carolien H. M.;
de Weerd, Vanja;
Martens, John W. M.;
IJzermans, Jan N. M.;
Wilting, Saskia M.

Publication type:

Article

4-protein signature predicting tamoxifen treatment outcome in recurrent breast cancer.

Published in:

Molecular Oncology, 2016, v. 10, n. 1, p. 24, doi. 10.1016/j.molonc.2015.07.004

By:

De Marchi, Tommaso;
Liu, Ning Qing;
Stingl, Cristoph;
Timmermans, Mieke A.;
Smid, Marcel;
Look, Maxime P.;
Tjoa, Mila;
Braakman, Rene B.H.;
Opdam, Mark;
Linn, Sabine C.;
Sweep, Fred C.G.J.;
Span, Paul N.;
Kliffen, Mike;
Luider, Theo M.;
Foekens, John A.;
Martens, John W.M.;
Umar, Arzu

Publication type:

Article

mRNA expression profiles in circulating tumor cells of metastatic colorectal cancer patients.

Published in:

Molecular Oncology, 2015, v. 9, n. 4, p. 920, doi. 10.1016/j.molonc.2015.01.001

By:

Mostert, Bianca;
Sieuwerts, Anieta M.;
Bolt-de Vries, Joan;
Kraan, Jaco;
Lalmahomed, Zarina;
van Galen, Anne;
van der Spoel, Petra;
de Weerd, Vanja;
Ramírez-Moreno, Raquel;
Smid, Marcel;
Verhoef, Cornelis;
IJzermans, Jan N.M.;
Gratama, Jan W.;
Sleijfer, Stefan;
Foekens, John A.;
Martens, John W.M.

Publication type:

Article

Proper genomic profiling of (BRCA1-mutated) basal-like breast carcinomas requires prior removal of tumor infiltrating lymphocytes.

Published in:

Molecular Oncology, 2015, v. 9, n. 4, p. 877, doi. 10.1016/j.molonc.2014.12.012

By:

Massink, Maarten P.G.;
Kooi, Irsan E.;
van Mil, Saskia E.;
Jordanova, Ekaterina S.;
Ameziane, Najim;
Dorsman, Josephine C.;
van Beek, Daphne M.;
van der Voorn, J. Patrick;
Sie, Daoud;
Ylstra, Bauke;
van Deurzen, Carolien H.M.;
Martens, John W.;
Smid, Marcel;
Sieuwerts, Anieta M.;
de Weerd, Vanja;
Foekens, John A.;
van den Ouweland, Ans M.W.;
van Dyk, Ewald;
Nederlof, Petra M.;
Waisfisz, Quinten

Publication type:

Article

DNA damage responsive microRNAs misexpressed in human cancer modulate therapy sensitivity.

Published in:

Molecular Oncology, 2014, v. 8, n. 3, p. 458, doi. 10.1016/j.molonc.2013.12.011

By:

van Jaarsveld, Marijn T.M.;
Wouters, Maikel D.;
Boersma, Antonius W.M.;
Smid, Marcel;
van IJcken, Wilfred F.J.;
Mathijssen, Ron H.J.;
Hoeijmakers, Jan H.J.;
Martens, John W.M.;
van Laere, Steven;
Wiemer, Erik A.C.;
Pothof, Joris

Publication type:

Article

Transcriptome analysis reveals cyclobutane pyrimidine dimers as a major source of UV-induced DNA breaks.

Published in:

EMBO Journal, 2005, v. 24, n. 22, p. 3952, doi. 10.1038/sj.emboj.7600849

By:

Garinis, George A.;
Mitchell, James R.;
Moorhouse, Michael J.;
Hanada, Katsuhiro;
de Waard, Harm;
Vandeputte, Dimitri;
Jans, Judith;
Brand, Karl;
Smid, Marcel;
van der Spek, Peter J.;
Hoeijmakers, Jan H. J.;
Kanaar, Roland;
van der Horst, Gijsbertus T. J.

Publication type:

Article

T lymphocytes facilitate brain metastasis of breast cancer by inducing Guanylate-Binding Protein 1 expression.

Published in:

Acta Neuropathologica, 2018, v. 135, n. 4, p. 581, doi. 10.1007/s00401-018-1806-2

By:

Mustafa, Dana A. M.;
Pedrosa, Rute M. S. M.;
Smid, Marcel;
van der Weiden, Marcel;
de Weerd, Vanja;
Nigg, Alex L.;
Berrevoets, Cor;
Zeneyedpour, Lona;
Priego, Neibla;
Valiente, Manuel;
Luider, Theo M.;
Debets, Reno;
Martens, John W. M.;
Foekens, John A.;
Sieuwerts, Anieta M.;
Kros, Johan M.

Publication type:

Article

Differential reprogramming of breast cancer subtypes in 3D cultures and implications for sensitivity to targeted therapy.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-86664-7

By:

Koedoot, Esmee;
Wolters, Liesanne;
Smid, Marcel;
Stoilov, Peter;
Burger, Gerhard A.;
Herpers, Bram;
Yan, Kuan;
Price, Leo S.;
Martens, John W. M.;
Le Dévédec, Sylvia E.;
van de Water, Bob

Publication type:

Article

Prognostic relevance of acquired uniparental disomy in serous ovarian cancer.

Published in:

Molecular Cancer, 2015, v. 14, n. 1, p. 1, doi. 10.1186/s12943-015-0289-1

By:

Tuna, Musaffe;
Zhenlin Ju;
Smid, Marcel;
Amos, Christopher I.;
Mills, Gordon B.

Publication type:

Article

Proteomic characterization of microdissected breast tissue environment provides a protein-level overview of malignant transformation.

Published in:

Proteomics, 2017, v. 17, n. 5, p. 1, doi. 10.1002/pmic.201600213

By:

Braakman, René B. H.;
Stingl, Christoph;
Tilanus‐Linthorst, Madeleine M. A.;
van Deurzen, Carolien H. M.;
Timmermans, Mieke A. M.;
Smid, Marcel;
Foekens, John A.;
Luider, Theo M.;
Martens, John W. M.;
Umar, Arzu

Publication type:

Article

Tumor-agnostic ctDNA levels by mFAST-SeqS in first-line HR-positive, HER2 negative metastatic breast cancer patients as a biomarker for survival.

Published in:

NPJ Breast Cancer, 2023, v. 9, n. 1, p. 1, doi. 10.1038/s41523-023-00563-w

By:

Verschoor, Noortje;
de Weerd, Vanja;
Van, Mai N.;
Kraan, Jaco;
Smid, Marcel;
Heijns, Joan B.;
Drooger, Jan C.;
Zuetenhorst, Johanna M.;
van der Padt-Pruijsten, Annemieke;
Jager, Agnes;
Sleijfer, Stefan;
Martens, John W. M.;
Wilting, Saskia M.

Publication type:

Article

The mTORC1 Complex Is Significantly Overactivated in SDHX -Mutated Paragangliomas.

Published in:

Neuroendocrinology, 2017, v. 105, n. 4, p. 384, doi. 10.1159/000455864

By:

Oudijk, Lindsey;
Papathomas, Thomas;
de Krijger, Ronald;
Korpershoek, Esther;
Gimenez-Roqueplo, anne-Paule;
Favier, Judith;
Canu, Letizia;
Mannelli, Massimo;
Rapa, Ida;
Currás-Freixes, Maria;
Robledo, Mercedes;
Smid, Marcel;
Papotti, Mauro;
Volante, Marco

Publication type:

Article

BCAR1/p130Cas expression in untreated and acquired tamoxifen-resistant human breast carcinomas.

Published in:

International Journal of Cancer, 2000, v. 89, n. 5, p. 465, doi. 10.1002/1097-0215(20000920)89:5<465::AID-IJC11>3.0.CO;2-O

By:

van der Flier, Silvia;
Chan, Christina M.W.;
Brinkman, Arend;
Smid, Marcel;
Johnston, Stephen R.D.;
Dorssers, Lambert C.J.;
Dowsett, Mitchell

Publication type:

Article

GRHL2-controlled gene expression networks in luminal breast cancer.

Published in:

Cell Communication & Signaling, 2023, v. 21, n. 1, p. 1, doi. 10.1186/s12964-022-01029-5

By:

Wang, Zi;
Coban, Bircan;
Wu, Haoyu;
Chouaref, Jihed;
Daxinger, Lucia;
Paulsen, Michelle T.;
Ljungman, Mats;
Smid, Marcel;
Martens, John W. M.;
Danen, Erik H. J.

Publication type:

Article

Gene length corrected trimmed mean of M-values (GeTMM) processing of RNA-seq data performs similarly in intersample analyses while improving intrasample comparisons.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2246-7

By:

Smid, Marcel;
Coebergh van den Braak, Robert R. J.;
van de Werken, Harmen J. G.;
van Riet, Job;
van Galen, Anne;
de Weerd, Vanja;
van der Vlugt-Daane, Michelle;
Bril, Sandra I.;
Lalmahomed, Zarina S.;
Kloosterman, Wigard P.;
Wilting, Saskia M.;
Foekens, John A.;
IJzermans, Jan N. M.;
on behalf of the MATCH study group;
Martens, John W. M.;
Sieuwerts, Anieta M.

Publication type:

Article

Response.

Published in:

2014

By:

Liu, Ning Qing;
Smid, Marcel;
Martens, John W M;
Foekens, John A;
Umar, Arzu

Publication type:

Journal Article

Response.

Published in:

2014

By:

Liu, Ning Qing;
Smid, Marcel;
Martens, John W.M.;
Foekens, John A.;
Umar, Arzu

Publication type:

Letter to the Editor

Comparative proteome analysis revealing an 11-protein signature for aggressive triple-negative breast cancer.

Published in:

2014

By:

Liu, Ning Qing;
Stingl, Christoph;
Look, Maxime P;
Smid, Marcel;
Braakman, René B H;
De Marchi, Tommaso;
Sieuwerts, Anieta M;
Span, Paul N;
Sweep, Fred C G J;
Linderholm, Barbro K;
Mangia, Anita;
Paradiso, Angelo;
Dirix, Luc Y;
Van Laere, Steven J;
Luider, Theo M;
Martens, John W M;
Foekens, John A;
Umar, Arzu

Publication type:

journal article

Comparative Proteome Analysis Revealing an 11-Protein Signature for AggressiveTriple-Negative Breast Cancer.

Published in:

JNCI: Journal of the National Cancer Institute, 2014, v. 106, n. 2, p. 1, doi. 10.1093/jnci/djt376

By:

Ning Qing Liu;
Stingl, Christoph;
Look, Maxime P.;
Smid, Marcel;
Braakman, René B. H.;
De Marchi, Tommaso;
Sieuwerts, Anieta M.;
Span, Paul N.;
Sweep, Fred C. G. J.;
Linderholm, Barbro K.;
Mangia, Anita;
Paradiso, Angelo;
Dirix, Luc Y.;
Van Laere, Steven J.;
Luider, Theo M.;
Martens, John W. M.;
Foekens, John A.;
Umar, Arzu

Publication type:

Article

Uncovering the signaling landscape controlling breast cancer cell migration identifies novel metastasis driver genes.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-11020-3

By:

Koedoot, Esmee;
Fokkelman, Michiel;
Rogkoti, Vasiliki-Maria;
Smid, Marcel;
van de Sandt, Iris;
de Bont, Hans;
Pont, Chantal;
Klip, Janna E.;
Wink, Steven;
Timmermans, Mieke A.;
Wiemer, Erik A. C.;
Stoilov, Peter;
Foekens, John A.;
Le Dévédec, Sylvia E.;
Martens, John W. M.;
van de Water, Bob

Publication type:

Article

Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-09828-0

By:

Brinkman, Arie B.;
Nik-Zainal, Serena;
Simmer, Femke;
Rodríguez-González, F. Germán;
Smid, Marcel;
Alexandrov, Ludmil B.;
Butler, Adam;
Martin, Sancha;
Davies, Helen;
Glodzik, Dominik;
Zou, Xueqing;
Ramakrishna, Manasa;
Staaf, Johan;
Ringnér, Markus;
Sieuwerts, Anieta;
Ferrari, Anthony;
Morganella, Sandro;
Fleischer, Thomas;
Kristensen, Vessela;
Gut, Marta

Publication type:

Article

Molecular Comparison of Imatinib-Naïve and Resistant Gastrointestinal Stromal Tumors: Differentially Expressed microRNAs and mRNAs.

Published in:

Cancers, 2019, v. 11, n. 6, p. 882, doi. 10.3390/cancers11060882

By:

Amirnasr, Azadeh;
Gits, Caroline M.M.;
van Kuijk, Patricia F.;
Smid, Marcel;
Vriends, Anne L.M.;
Rutkowski, Piotr;
Sciot, Raf;
Schöffski, Patrick;
Debiec-Rychter, Maria;
Sleijfer, Stefan;
Wiemer, Erik A. C.

Publication type:

Article

Mitochondrial RNA Expression and Single Nucleotide Variants in Association with Clinical Parameters in Primary Breast Cancers.

Published in:

Cancers, 2018, v. 10, n. 12, p. 500, doi. 10.3390/cancers10120500

By:

Weerts, Marjolein J. A.;
Smid, Marcel;
Foekens, John A.;
Sleijfer, Stefan;
Martens, John W. M.

Publication type:

Article

The Prevalence of CD146 Expression in Breast Cancer Subtypes and Its Relation to Outcome.

Published in:

Cancers, 2018, v. 10, n. 5, p. 134, doi. 10.3390/cancers10050134

By:

de Kruijff, Ingeborg E.;
Timmermans, Anna M.;
den Bakker, Michael A.;
Trapman-Jansen, Anita M.A.C.;
Foekens, Renée;
Meijer-Van Gelder, Marion E.;
Oomen-de Hoop, Esther;
Smid, Marcel;
Hollestelle, Antoinette;
van Deurzen, Carolien H.M.;
Foekens, John A.;
Martens, John W.M.;
Sleijfer, Stefan

Publication type:

Article

MicroRNAs as possible indicators of drug sensitivity in breast cancer cell lines.

Published in:

PLoS ONE, 2019, v. 14, n. 5, p. 1, doi. 10.1371/journal.pone.0216400

By:

Uhr, Katharina;
Prager-van der Smissen, Wendy J. C.;
Heine, Anouk A. J.;
Ozturk, Bahar;
van Jaarsveld, Marijn T. M.;
Boersma, Antonius W. M.;
Jager, Agnes;
Wiemer, Erik A. C.;
Smid, Marcel;
Foekens, John A.;
Martens, John W. M.

Publication type:

Article

An increased cell cycle gene network determines MEK and Akt inhibitor double resistance in triple-negative breast cancer.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-49809-3

By:

van der Noord, Vera E.;
McLaughlin, Ronan P.;
Smid, Marcel;
Foekens, John A.;
Martens, John W. M.;
Zhang, Yinghui;
van de Water, Bob

Publication type:

Article

Co-regulated gene expression of splicing factors as drivers of cancer progression.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-40759-4

By:

Koedoot, Esmee;
Smid, Marcel;
Foekens, John A.;
Martens, John W. M.;
Le Dévédec, Sylvia E.;
van de Water, Bob

Publication type:

Article

Comprehensive evaluation of methods to assess overall and cell-specific immune infiltrates in breast cancer.

Published in:

2019

By:

Nederlof, Iris;
De Bortoli, Davide;
Bareche, Yacine;
Nguyen, Bastien;
de Maaker, Michiel;
Hooijer, Gerrit K. J.;
Buisseret, Laurence;
Kok, Marleen;
Smid, Marcel;
Van den Eynden, Gert G. G. M.;
Brinkman, Arie B.;
Hudecek, Jan;
Koster, Jan;
Sotiriou, Christos;
Larsimont, Denis;
Martens, John W. M.;
van de Vijver, Marc J.;
Horlings, Hugo M.;
Salgado, Roberto;
Biganzoli, Elia

Publication type:

journal article

Cancer-associated fibroblast-derived Gremlin 1 promotes breast cancer progression.

Published in:

2019

By:

Ren, Jiang;
Smid, Marcel;
Iaria, Josephine;
Salvatori, Daniela C. F.;
van Dam, Hans;
Zhu, Hong Jian;
Martens, John W. M.;
ten Dijke, Peter

Publication type:

journal article

A kinase inhibitor screen identifies a dual cdc7/CDK9 inhibitor to sensitise triple-negative breast cancer to EGFR-targeted therapy.

Published in:

2019

By:

McLaughlin, Ronan P.;
He, Jichao;
van der Noord, Vera E.;
Redel, Jevin;
Foekens, John A.;
Martens, John W. M.;
Smid, Marcel;
Zhang, Yinghui;
van de Water, Bob

Publication type:

journal article

High mRNA expression of splice variant SYK short correlates with hepatic disease progression in chemonaive lymph node negative colon cancer patients.

Published in:

PLoS ONE, 2017, v. 12, n. 9, p. 1, doi. 10.1371/journal.pone.0185607

By:

Coebergh van den Braak, Robert R. J.;
Sieuwerts, Anieta M.;
Kandimalla, Raju;
Lalmahomed, Zarina S.;
Bril, Sandra I.;
van Galen, Anne;
Smid, Marcel;
Biermann, Katharina;
van Krieken, J. Han J. M.;
Kloosterman, Wigard P.;
Foekens, John A.;
Goel, Ajay;
Martens, John W. M.;
IJzermans, Jan N. M.;
null, null

Publication type:

Article

Pathway analysis of gene signatures predicting metastasis ofnode-negative primary breast cancer.

Published in:

BMC Cancer, 2007, v. 7, p. 182, doi. 10.1186/1471-2407-7-182

By:

Yu, Jack X.;
Sieuwerts, Anieta M.;
Yi Zhang;
Martens, John W. M.;
Smid, Marcel;
Klijn, Jan G. M.;
Yixin Wang;
Foekens, John A.

Publication type:

Article

GO-Mapper: functional analysis of gene expression data using the expression level as a score to evaluate Gene Ontology terms.

Published in:

Bioinformatics, 2004, v. 20, n. 16, p. 2618, doi. 10.1093/bioinformatics/bth293

By:

Marcel Smid;
Lambert C. J. Dorssers

Publication type:

Article

Venn Mapping: clustering of heterologous microarray data based on the number of co-occurring differentially expressed genes.

Published in:

Bioinformatics, 2003, v. 19, n. 16, p. 2065, doi. 10.1093/bioinformatics/btg282

By:

Marcel Smid;
Lambert C.J. Dorssers;
Guido Jenster

Publication type:

Article

Transcriptomic Properties of HER2+ Ductal Carcinoma In Situ of the Breast Associate with Absence of Immune Cells.

Published in:

Biology (2079-7737), 2021, v. 10, n. 8, p. 768, doi. 10.3390/biology10080768

By:

Agahozo, Marie Colombe;
Smid, Marcel;
van Marion, Ronald;
Hammerl, Dora;
van den Bosch, Thierry P. P.;
Timmermans, Mieke A. M.;
Heijerman, Chayenne J.;
Westenend, Pieter J.;
Debets, Reno;
Martens, John W. M.;
van Deurzen, Carolien H. M.

Publication type:

Article

Prognostic significance of TP53 accumulation in human primary breast cancer: Comparison between a rapid quantitative immunoassay and SSCP analysis.

Published in:

International Journal of Cancer, 1996, v. 69, n. 2, p. 125, doi. 10.1002/(SICI)1097-0215(19960422)69:2<125::AID-IJC10>3.0.CO;2-8

By:

de Witte, Hans H.;
Foekens, John A.;
Lennerstrand, Johan;
Smid, Marcel;
Look, Maxime P.;
Klijn, Jan G. M.;
Benraad, Theo J.;
Berns, Els M. J. J.

Publication type:

Article

KLF6-SV1 Drives Breast Cancer Metastasis and Is Associated with Poor Survival.

Published in:

Science Translational Medicine, 2013, v. 5, n. 169, p. 1, doi. 10.1126/scitranslmed.3004688

By:

Hatami, Raheleh;
Sieuwerts, Anieta M.;
Izadmehr, Sudeh;
Zhong Yao;
Rui Fang Qiao;
Papa, Luena;
Look, Maxime P.;
Smid, Marcel;
Ohlssen, Jessica;
Levine, Alice C.;
Germain, Doris;
Burstein, David;
Kirschenbaum, Alexander;
DiFeo, Analisa;
Foekens, John A.;
Narla, Goutham

Publication type:

Article

Lost by Transcription: Fork Failures, Elevated Expression, and Clinical Consequences Related to Deletions in Metastatic Colorectal Cancer.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 9, p. 5080, doi. 10.3390/ijms23095080

By:

Smid, Marcel;
Wilting, Saskia M.;
Martens, John W. M.

Publication type:

Article

The advantage of laser-capture microdissection over whole tissue analysis in proteomic profiling studies.

Published in:

Proteomics, 2016, v. 16, n. 10, p. 1474, doi. 10.1002/pmic.201600004

By:

Marchi, Tommaso;
Braakman, Rene B. H.;
Stingl, Christoph;
Duijn, Martijn M.;
Smid, Marcel;
Foekens, John A.;
Luider, Theo M.;
Martens, John W. M.;
Umar, Arzu

Publication type:

Article

TP53 and MYC gene alterations independently predict poor prognosis in breast cancer patients.

Published in:

Genes, Chromosomes & Cancer, 1996, v. 16, n. 3, p. 170, doi. 10.1002/(SICI)1098-2264(199607)16:3<170::AID-GCC3>3.0.CO;2-W

By:

Berns, Els M.J. J.;
Klijn, Jan G. M.;
Smid, Marcel;
van Staveren, Iris L.;
Look, Maxime P.;
van Putten, Wim L. J.;
Foekens, John A.

Publication type:

Article

Breast cancer genome and transcriptome integration implicates specific mutational signatures with immune cell infiltration.

Published in:

Nature Communications, 2016, v. 7, n. 9, p. 12910, doi. 10.1038/ncomms12910

By:

Smid, Marcel;
Rodríguez-González, F. Germán;
Sieuwerts, Anieta M.;
Salgado, Roberto;
Prager-Van der Smissen, Wendy J. C.;
Vlugt-Daane, Michelle van der;
van Galen, Anne;
Nik-Zainal, Serena;
Staaf, Johan;
Brinkman, Arie B.;
van de Vijver, Marc J.;
Richardson, Andrea L.;
Fatima, Aquila;
Berentsen, Kim;
Butler, Adam;
Martin, Sancha;
Davies, Helen R.;
Debets, Reno;
Gelder, Marion E. Meijer-Van;
van Deurzen, Carolien H. M.

Publication type:

Article

Prognostic significance of nuclear expression of UMP-CMP kinase in triple negative breast cancer patients.

Published in:

Scientific Reports, 2016, p. 32027, doi. 10.1038/srep32027

By:

Liu, Ning Qing;
De Marchi, Tommaso;
Timmermans, Annemieke;
Trapman-Jansen, Anita M. A. C.;
Foekens, Renée;
Look, Maxime P.;
Smid, Marcel;
van Deurzen, Carolien H. M.;
Span, Paul N.;
Sweep, Fred C. G. J.;
Brask, Julie Benedicte;
Timmermans-Wielenga, Vera;
Foekens, John A.;
Martens, John W. M.;
Umar, Arzu

Publication type:

Article

Fusion transcripts and their genomic breakpoints in polyadenylated and ribosomal RNA–minus RNA sequencing data.

Published in:

GigaScience, 2021, v. 10, n. 12, p. 1, doi. 10.1093/gigascience/giab080

By:

Hoogstrate, Youri;
Komor, Malgorzata A;
Böttcher, René;
van Riet, Job;
van de Werken, Harmen J G;
van Lieshout, Stef;
Hoffmann, Ralf;
van den Broek, Evert;
Bolijn, Anne S;
Dits, Natasja;
Sie, Daoud;
van der Meer, David;
Pepers, Floor;
Bangma, Chris H;
van Leenders, Geert J L H;
Smid, Marcel;
French, Pim J;
Martens, John W M;
van Workum, Wilbert;
van der Spek, Peter J

Publication type:

Article

Androgen receptor expression in circulating tumor cells of patients with metastatic breast cancer.

Published in:

International Journal of Cancer, 2019, v. 145, n. 4, p. 1083, doi. 10.1002/ijc.32209

By:

Kruijff, Ingeborg E.;
Sieuwerts, Anieta M.;
Onstenk, Wendy;
Jager, Agnes;
Hamberg, Paul;
Jongh, Felix E.;
Smid, Marcel;
Kraan, Jaco;
Timmermans, Mieke A.;
Martens, John W. M.;
Sleijfer, Stefan

Publication type:

Article