Works by Shiro Fukuda


Results: 43
    1
    2

    Adiponectin promotes muscle regeneration through binding to T-cadherin.

    Published in:
    Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-018-37115-3
    By:
    • Tanaka, Yoshimitsu;
    • Kita, Shunbun;
    • Nishizawa, Hitoshi;
    • Fukuda, Shiro;
    • Fujishima, Yuya;
    • Obata, Yoshinari;
    • Nagao, Hirofumi;
    • Masuda, Shigeki;
    • Nakamura, Yuto;
    • Shimizu, Yuri;
    • Mineo, Ryohei;
    • Natsukawa, Tomoaki;
    • Funahashi, Tohru;
    • Ranscht, Barbara;
    • Fukada, So-ichiro;
    • Maeda, Norikazu;
    • Shimomura, Iichiro
    Publication type:
    Article
    3

    Food Preference Assessed by the Newly Developed Nutrition-Based Japan Food Preference Questionnaire and Its Association with Dietary Intake in Abdominal-Obese Subjects.

    Published in:
    Nutrients, 2024, v. 16, n. 23, p. 4252, doi. 10.3390/nu16234252
    By:
    • Nagai, Naoko;
    • Fujishima, Yuya;
    • Tokuzawa, Chie;
    • Takayanagi, Satoko;
    • Yamamoto, Mikiko;
    • Hara, Tomoyuki;
    • Kimura, Yu;
    • Nagao, Hirofumi;
    • Obata, Yoshinari;
    • Fukuda, Shiro;
    • Baden, Megu Y.;
    • Kozawa, Junji;
    • Maeda, Norikazu;
    • Nishizawa, Hitoshi;
    • Shimomura, Iichiro
    Publication type:
    Article
    4

    Corrigendum: Tiny RNAs associated with transcription start sites in animals.

    Published in:
    2009
    By:
    • Taft, Ryan J;
    • Glazov, Evgeny A;
    • Cloonan, Nicole;
    • Simons, Cas;
    • Stephen, Stuart;
    • Faulkner, Geoffrey J;
    • Lassmann, Timo;
    • Forrest, Alistair R R;
    • Grimmond, Sean M;
    • Schroder, Kate;
    • Irvine, Katharine;
    • Arakawa, Takahiro;
    • Nakamura, Mari;
    • Kubosaki, Atsutaka;
    • Hayashida, Kengo;
    • Kawazu, Chika;
    • Murata, Mitsuyoshi;
    • Nishiyori, Hiromi;
    • Fukuda, Shiro;
    • Kawai, Jun
    Publication type:
    Correction Notice
    5

    Tiny RNAs associated with transcription start sites in animals.

    Published in:
    Nature Genetics, 2009, v. 41, n. 5, p. 572, doi. 10.1038/ng.312
    By:
    • Taft, Ryan J.;
    • Glazov, Evgeny A.;
    • Cloonan, Nicole;
    • Simons, Cas;
    • Stephen, Stuart;
    • Faulkner, Geoffrey J.;
    • Lassmann, Timo;
    • Forrest, Alistair R. R.;
    • Grimmond, Sean M.;
    • Schroder, Kate;
    • Irvine, Katharine;
    • Arakawa, Takahiro;
    • Nakamura, Mari;
    • Kubosaki, Atsutaka;
    • Hayashida, Kengo;
    • Kawazu, Chika;
    • Murata, Mitsuyoshi;
    • Nishiyori, Hiromi;
    • Fukuda, Shiro;
    • Kawai, Jun
    Publication type:
    Article
    6

    Corrigendum: Genome-wide analysis of mammalian promoter architecture and evolution.

    Published in:
    2007
    By:
    • Carninci, Piero;
    • Sandelin, Albin;
    • Lenhard, Boris;
    • Katayama, Shintaro;
    • Shimokawa, Kazuro;
    • Ponjavic, Jasmina;
    • Semple, Colin A. M.;
    • Taylor, Martin S.;
    • Engström G, Pär G.;
    • Frith, Martin C.;
    • Forrest, Alistair R. R.;
    • Alkema, Wynand B.;
    • Tan, Sin Lam;
    • Plessy, Charles;
    • Kodzius, Rimantas;
    • Ravasi, Timothy;
    • Kasukawa, Takeya;
    • Fukuda, Shiro;
    • Kanamori-Katayama, Mutsumi;
    • Kitazume, Yayoi
    Publication type:
    Correction Notice
    7

    Genome-wide analysis of mammalian promoter architecture and evolution.

    Published in:
    Nature Genetics, 2006, v. 38, n. 6, p. 626, doi. 10.1038/ng1789
    By:
    • Carninci, Piero;
    • Sandelin, Albin;
    • Lenhard, Boris;
    • Katayama, Shintaro;
    • Shimokawa, Kazuro;
    • Ponjavic, Jasmina;
    • Semple, Colin A. M.;
    • Taylor, Martin S.;
    • Engström, Pär G.;
    • Frith, Martin C.;
    • Forrest, Alistair R. R.;
    • Alkema, Wynand B.;
    • Sin Lam Tan;
    • Plessy, Charles;
    • Kodzius, Rimantas;
    • Ravasi, Timothy;
    • Kasukawa, Takeya;
    • Fukuda, Shiro;
    • Kanamori-Katayama, Mutsumi;
    • Kitazume, Yayoi
    Publication type:
    Article
    8
    9
    10

    Hidden layers of human small RNAs.

    Published in:
    BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-157
    By:
    • Kawaji, Hideya;
    • Nakamura, Mari;
    • Takahashi, Yukari;
    • Sandelin, Albin;
    • Katayama, Shintaro;
    • Fukuda, Shiro;
    • Daub, Carsten O.;
    • Kai, Chikatoshi;
    • Kawai, Jun;
    • Yasuda, Jun;
    • Carninci, Piero;
    • Hayashizaki, Yoshihide
    Publication type:
    Article
    11
    12
    13

    Genetic and epigenetic basis of hepatoblastoma diversity.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25430-9
    By:
    • Nagae, Genta;
    • Yamamoto, Shogo;
    • Fujita, Masashi;
    • Fujita, Takanori;
    • Nonaka, Aya;
    • Umeda, Takayoshi;
    • Fukuda, Shiro;
    • Tatsuno, Kenji;
    • Maejima, Kazuhiro;
    • Hayashi, Akimasa;
    • Kurihara, Sho;
    • Kojima, Masato;
    • Hishiki, Tomoro;
    • Watanabe, Kenichiro;
    • Ida, Kohmei;
    • Yano, Michihiro;
    • Hiyama, Yoko;
    • Tanaka, Yukichi;
    • Inoue, Takeshi;
    • Ueda, Hiroki
    Publication type:
    Article
    14
    15

    Region‐specific DNA hydroxymethylation along the malignant progression of IDH‐mutant gliomas.

    Published in:
    Cancer Science, 2024, v. 115, n. 5, p. 1706, doi. 10.1111/cas.16127
    By:
    • Hana, Taijun;
    • Mukasa, Akitake;
    • Nomura, Masashi;
    • Nagae, Genta;
    • Yamamoto, Shogo;
    • Tatsuno, Kenji;
    • Ueda, Hiroki;
    • Fukuda, Shiro;
    • Umeda, Takayoshi;
    • Tanaka, Shota;
    • Nejo, Takahide;
    • Kitagawa, Yosuke;
    • Yamazawa, Erika;
    • Takahashi, Satoshi;
    • Koike, Tsukasa;
    • Kushihara, Yoshihiro;
    • Takami, Hirokazu;
    • Takayanagi, Shunsaku;
    • Aburatani, Hiroyuki;
    • Saito, Nobuhito
    Publication type:
    Article
    16
    17
    18
    19
    20
    21
    22
    23

    CAGE: cap analysis of gene expression.

    Published in:
    Nature Methods, 2006, v. 3, n. 3, p. 211, doi. 10.1038/nmeth0306-211
    By:
    • Kodzius, Rimantas;
    • Kojima, Miki;
    • Nishiyori, Hiromi;
    • Nakamura, Mari;
    • Fukuda, Shiro;
    • Tagami, Michihira;
    • Sasaki, Daisuke;
    • Imamura, Kengo;
    • Kai, Chikatoshi;
    • Harbers, Matthias;
    • Hayashizaki, Yoshihide;
    • Carninci, Piero
    Publication type:
    Article
    24
    25
    26

    DNA demethylation is associated with malignant progression of lower-grade gliomas.

    Published in:
    Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-38510-0
    By:
    • Nomura, Masashi;
    • Saito, Kuniaki;
    • Aihara, Koki;
    • Nagae, Genta;
    • Yamamoto, Shogo;
    • Tatsuno, Kenji;
    • Ueda, Hiroki;
    • Fukuda, Shiro;
    • Umeda, Takayoshi;
    • Tanaka, Shota;
    • Takayanagi, Shunsaku;
    • Otani, Ryohei;
    • Nejo, Takahide;
    • Hana, Taijun;
    • Takahashi, Satoshi;
    • Kitagawa, Yosuke;
    • Omata, Mayu;
    • Higuchi, Fumi;
    • Nakamura, Taishi;
    • Muragaki, Yoshihiro
    Publication type:
    Article
    27

    Gateways to the FANTOM5 promoter level mammalian expression atlas.

    Published in:
    Genome Biology, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s13059-014-0560-6
    By:
    • Lizio, Marina;
    • Harshbarger, Jayson;
    • Hisashi Shimoji;
    • Severin, Jessica;
    • Takeya Kasukawa;
    • Sahin, Serkan;
    • Abugessaisa, Imad;
    • Shiro Fukuda;
    • Fumi Hori;
    • Sachi Ishikawa-Kato;
    • Mungall, Christopher J.;
    • Arner, Erik;
    • Baillie, J. Kenneth;
    • Bertin, Nicolas;
    • Hidemasa Bono;
    • de Hoon, Michiel;
    • Diehl, Alexander D.;
    • Dimont, Emmanuel;
    • Freeman, Tom C.;
    • Kaori Fujieda
    Publication type:
    Article
    28

    Associations between muscle quality and whole-body vibration exercise-induced changes in plasma hypoxanthine following an oral glucose load in healthy male subjects.

    Published in:
    Endocrine Journal, 2025, n. 2, p. 171, doi. 10.1507/endocrj.EJ24-0358
    By:
    • Tomoyuki Hara;
    • Yuya Fujishima;
    • Hitoshi Nishizawa;
    • Yusuke Kawachi;
    • Takashi Nakamura;
    • Seigo Akari;
    • Yoshiyuki Ono;
    • Hirotaka Watanabe;
    • Taka-aki Sakaue;
    • Yoshinari Obata;
    • Hirofumi Nagao;
    • Shiro Fukuda;
    • Takashi Kanamoto;
    • Mitsuyoshi Takahara;
    • Naoto Katakami;
    • Ken Nakata;
    • Iichiro Shimomura
    Publication type:
    Article
    29
    30
    31

    Chronic hyperadiponectinemia induced by transgenic overexpression increases plasma exosomes without significantly improving glucose and lipid metabolism.

    Published in:
    Endocrine Journal, 2023, v. 70, n. 6, p. 635, doi. 10.1507/endocrj.ej22-0665
    By:
    • Keitaro Kawada;
    • Shunbun Kita;
    • Shiro Fukuda;
    • Keita Fukuoka;
    • Tomonori Okita;
    • Emi Kawada-Horitani;
    • Masahito Iioka;
    • Taka-aki Sakaue;
    • Yusuke Kawachi;
    • Kohei Fujii;
    • Yu Kimura;
    • Shuichi Otabe;
    • Yuya Fujishima;
    • Hitoshi Nishizawa;
    • Norikazu Maeda;
    • Iichiro Shimomura
    Publication type:
    Article
    32

    Low muscle quality in Japanese type 2 diabetic patients with visceral fat accumulation.

    Published in:
    Cardiovascular Diabetology, 2018, v. 17, n. 1, p. N.PAG, doi. 10.1186/s12933-018-0755-3
    By:
    • Murai, Jun;
    • Nishizawa, Hitoshi;
    • Otsuka, Akihito;
    • Fukuda, Shiro;
    • Tanaka, Yoshimitsu;
    • Nagao, Hirofumi;
    • Sakai, Yasuna;
    • Suzuki, Masahide;
    • Yokota, Shinji;
    • Tada, Hidetoshi;
    • Doi, Mayumi;
    • Fujishima, Yuya;
    • Kita, Shunbun;
    • Funahashi, Tohru;
    • Maeda, Norikazu;
    • Nakamura, Tadashi;
    • Shimomura, Iichiro
    Publication type:
    Article
    33
    34
    35

    Distinct molecular profile of diffuse cerebellar gliomas.

    Published in:
    Acta Neuropathologica, 2017, v. 134, n. 6, p. 941, doi. 10.1007/s00401-017-1771-1
    By:
    • Nomura, Masashi;
    • Mukasa, Akitake;
    • Nagae, Genta;
    • Yamamoto, Shogo;
    • Tatsuno, Kenji;
    • Ueda, Hiroki;
    • Fukuda, Shiro;
    • Umeda, Takayoshi;
    • Suzuki, Tomonari;
    • Otani, Ryohei;
    • Kobayashi, Keiichi;
    • Maruyama, Takashi;
    • Tanaka, Shota;
    • Takayanagi, Shunsaku;
    • Nejo, Takahide;
    • Takahashi, Satoshi;
    • Ichimura, Koichi;
    • Nakamura, Taishi;
    • Muragaki, Yoshihiro;
    • Narita, Yoshitaka
    Publication type:
    Article
    36
    37
    38
    39
    40

    A RecA-mediated exon profiling method.

    Published in:
    Nucleic Acids Research, 2006, v. 34, n. 13, p. e97, doi. 10.1093/nar/gkl497
    By:
    • Hasegawa, Yuki;
    • Fukuda, Shiro;
    • Shimokawa, Kazuro;
    • Kondo, Shinji;
    • Maeda, Norihiro;
    • Hayashizaki, Yoshihide
    Publication type:
    Article
    41
    42
    43

    Clusters of Internally Primed Transcripts Reveal Novel Long Noncoding RNAs.

    Published in:
    PLoS Genetics, 2006, v. 2, n. 4, p. e37, doi. 10.1371/journal.pgen.0020037
    By:
    • Furuno, Masaaki;
    • Pang, Ken C.;
    • Ninomiya, Noriko;
    • Fukuda, Shiro;
    • Frith, Martin C.;
    • Bult, Carol;
    • Kai, Chikatoshi;
    • Kawai, Jun;
    • Carninci, Piero;
    • Hayashizaki, Yoshihide;
    • Mattick, John S.;
    • Suzuki, Harukazu
    Publication type:
    Article