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Evolutionary dynamics of respiratory syncytial virus in Buenos Aires: Viral diversity, migration, and subgroup replacement.
Published in:
Virus Evolution, 2023, v. 9, n. 1, p. 1, doi. 10.1093/ve/vead006
By:
- Goya, Stephanie;
- Lucion, Maria Florencia;
- Shilts, Meghan H;
- Juárez, María del Valle;
- Gentile, Angela;
- Mistchenko, Alicia S;
- Viegas, Mariana;
- Das, Suman R
Publication type:
Article
Species-specific transcriptomic changes upon respiratory syncytial virus infection in cotton rats.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-19810-4
By:
- Strickland, Britton A.;
- Rajagopala, Seesandra V.;
- Kamali, Arash;
- Shilts, Meghan H.;
- Pakala, Suman B.;
- Boukhvalova, Marina S.;
- Yooseph, Shibu;
- Blanco, Jorge C. G.;
- Das, Suman R.
Publication type:
Article
Severe COVID-19 Is Associated With an Altered Upper Respiratory Tract Microbiome.
Published in:
Frontiers in Cellular & Infection Microbiology, 2022, p. 1, doi. 10.3389/fcimb.2021.781968
By:
- Shilts, Meghan H.;
- Rosas-Salazar, Christian;
- Strickland, Britton A.;
- Kimura, Kyle S.;
- Asad, Mohammad;
- Sehanobish, Esha;
- Freeman, Michael H.;
- Wessinger, Bronson C.;
- Gupta, Veerain;
- Brown, Hunter M.;
- Boone, Helen H.;
- Patel, Viraj;
- Barbi, Mali;
- Bottalico, Danielle;
- O'Neill, Meaghan;
- Akbar, Nadeem;
- Rajagopala, Seesandra V.;
- Mallal, Simon;
- Phillips, Elizabeth;
- Turner, Justin H.
Publication type:
Article
Respiratory Syncytial Virus whole-genome sequencing identifies convergent evolution of sequence duplication in the C-terminus of the G gene.
Published in:
Scientific Reports, 2016, p. 26311, doi. 10.1038/srep26311
By:
- Schobel, Seth A.;
- Stucker, Karla M.;
- Moore, Martin L.;
- Anderson, Larry J.;
- Larkin, Emma K.;
- Shankar, Jyoti;
- Bera, Jayati;
- Puri, Vinita;
- Shilts, Meghan H.;
- Rosas-Salazar, Christian;
- Halpin, Rebecca A.;
- Fedorova, Nadia;
- Shrivastava, Susmita;
- Stockwell, Timothy B.;
- Peebles, R. Stokes;
- Hartert, Tina V.;
- Das, Suman R.
Publication type:
Article
Nasopharyngeal Microbiome in Respiratory Syncytial Virus Resembles Profile Associated with Increased Childhood Asthma Risk.
Published in:
2016
By:
- Rosas-Salazar, Christian;
- Shilts, Meghan H.;
- Tovchigrechko, Andrey;
- Chappell, James D.;
- Larkin, Emma K.;
- Nelson, Karen E.;
- Moore, Martin L.;
- Anderson, Larry J.;
- Das, Suman R;
- Hartert, Tina V
Publication type:
journal article
Proton Pump Inhibitors Modulate Gene Expression Profile in Esophageal Mucosa and Microbiome.
Published in:
Journal of Pediatric Pharmacology & Therapeutics, 2023, v. 28, n. 6, p. 504, doi. 10.5863/1551-6776-28.6.504
By:
- Rajagopala, Seesandra V.;
- Shilts, Meghan H.;
- Correa, Hernan;
- Das, Suman R.;
- Choksi, Yash A.;
- Jacobse, Justin;
- Goettel, Jeremy A.;
- Hiremath, Girish
Publication type:
Article
Evaluation of the upper airway microbiome and immune response with nasal epithelial lining fluid absorption and nasal washes.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-77289-3
By:
- Shilts, Meghan H.;
- Rosas-Salazar, Christian;
- Lynch, Christian E.;
- Tovchigrechko, Andrey;
- Boone, Helen H.;
- Russell, Patty B.;
- Connolly, Alexandra S.;
- Costello, Kaitlin M.;
- McCollum, Megan D.;
- Mai, Annie;
- Wiggins, Derek A.;
- Rajagopala, Seesandra V.;
- Yooseph, Shibu;
- Peebles, R. Stokes;
- Hartert, Tina V.;
- Das, Suman R.
Publication type:
Article
Mucosal Microbiome Disruption in Acute Laryngeal Injury Following Intubation.
Published in:
Otolaryngology-Head & Neck Surgery, 2024, v. 170, n. 3, p. 977, doi. 10.1002/ohn.580
By:
- Davis, Ruth J.;
- Shilts, Meghan H.;
- Strickland, Britton A.;
- Rajagopala, Seesandra V.;
- Das, Suman R.;
- Wootten, Christopher T.;
- Gelbard, Alexander
Publication type:
Article
Complex Epidemiological Dynamics of Eastern Equine Encephalitis Virus in Florida.
Published in:
American Journal of Tropical Medicine & Hygiene, 2019, v. 100, n. 5, p. 1266, doi. 10.4269/ajtmh.18-0783
By:
- Heberlein-Larson, Lea A.;
- Yi Tan;
- Stark, Lillian M.;
- Cannons, Andrew C.;
- Shilts, Meghan H.;
- Unnasch, Thomas R.;
- Das, Suman R.
Publication type:
Article
Dietary Arginine Regulates Severity of Experimental Colitis and Affects the Colonic Microbiome.
Published in:
Frontiers in Cellular & Infection Microbiology, 2019, v. 9, p. N.PAG, doi. 10.3389/fcimb.2019.00066
By:
- Singh, Kshipra;
- Gobert, Alain P.;
- Coburn, Lori A.;
- Barry, Daniel P.;
- Allaman, Margaret;
- Asim, Mohammad;
- Luis, Paula B.;
- Schneider, Claus;
- Milne, Ginger L.;
- Boone, Helen H.;
- Shilts, Meghan H.;
- Washington, M. Kay;
- Das, Suman R.;
- Piazuelo, M. Blanca;
- Wilson, Keith T.
Publication type:
Article
Ligation‐based assay for variant typing without sequencing: Application to SARS‐CoV‐2 variants of concern.
Published in:
Influenza & Other Respiratory Viruses, 2023, v. 17, n. 1, p. 1, doi. 10.1111/irv.13083
By:
- Nelson, Dalton J.;
- Shilts, Meghan H.;
- Pakala, Suman B.;
- Das, Suman R.;
- Schmitz, Jonathan E.;
- Haselton, Frederick R.
Publication type:
Article
COVID‐19 severity from Omicron and Delta SARS‐CoV‐2 variants.
Published in:
Influenza & Other Respiratory Viruses, 2022, v. 16, n. 5, p. 832, doi. 10.1111/irv.12982
By:
- Wrenn, Jesse O.;
- Pakala, Suman B.;
- Vestal, Grant;
- Shilts, Meghan H.;
- Brown, Hunter M.;
- Bowen, Sara M.;
- Strickland, Britton A.;
- Williams, Timothy;
- Mallal, Simon A.;
- Jones, Ian D.;
- Schmitz, Jonathan E.;
- Self, Wesley H.;
- Das, Suman R.
Publication type:
Article
Cotton rat lung transcriptome reveals host immune response to Respiratory Syncytial Virus infection.
Published in:
Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-29374-x
By:
- Rajagopala, Seesandra V.;
- Singh, Harinder;
- Patel, Mira C.;
- Wang, Wei;
- Tan, Yi;
- Shilts, Meghan H.;
- Hartert, Tina V.;
- Boukhvalova, Marina S.;
- Blanco, Jorge C. G.;
- Das, Suman R.
Publication type:
Article
Patterns of olfactory dysfunction in chronic rhinosinusitis identified by hierarchical cluster analysis and machine learning algorithms.
Published in:
International Forum of Allergy & Rhinology, 2019, v. 9, n. 3, p. 255, doi. 10.1002/alr.22249
By:
- Morse, Justin C.;
- Shilts, Meghan H.;
- Ely, Kim A.;
- Li, Ping;
- Sheng, Quanhu;
- Huang, Li‐Ching;
- Wannemuehler, Todd J.;
- Chowdhury, Naweed I.;
- Chandra, Rakesh K.;
- Das, Suman R.;
- Turner, Justin H.
Publication type:
Article
Distinct mucosal microbial communities in infants with surgical necrotizing enterocolitis correlate with age and antibiotic exposure.
Published in:
PLoS ONE, 2018, v. 13, n. 10, p. 1, doi. 10.1371/journal.pone.0206366
By:
- Romano-Keeler, Joann;
- Shilts, Meghan H.;
- Tovchigrechko, Andrey;
- Wang, Chunlin;
- Brucker, Robert M.;
- Moore, Daniel J.;
- Fonnesbeck, Christopher;
- Meng, Shufang;
- Correa, Hernan;
- IIILovvorn, Harold N.;
- Tang, Yi-Wei;
- Hooper, Lora;
- Bordenstein, Seth R.;
- Das, Suman R.;
- Weitkamp, Jörn-Hendrik
Publication type:
Article
Viral Genetic Determinants of Prolonged Respiratory Syncytial Virus Infection Among Infants in a Healthy Term Birth Cohort.
Published in:
Journal of Infectious Diseases, 2023, v. 227, n. 10, p. 1194, doi. 10.1093/infdis/jiac442
By:
- Lawless, Dylan;
- McKennan, Christopher G;
- Das, Suman R;
- Junier, Thomas;
- Xu, Zhi Ming;
- Anderson, Larry J;
- Gebretsadik, Tebeb;
- Shilts, Meghan H;
- Larkin, Emma;
- Rosas-Salazar, Christian;
- Chappell, James D;
- Fellay, Jacques;
- Hartert, Tina V
Publication type:
Article
Summer Outbreak of Severe RSV-B Disease, Minnesota, 2017 Associated with Emergence of a Genetically Distinct Viral Lineage.
Published in:
2020
By:
- Thielen, Beth K;
- Bye, Erica;
- Wang, Xiong;
- Maroushek, Stacene;
- Friedlander, Hannah;
- Bistodeau, Sarah;
- Christensen, Jaime;
- Reisdorf, Erik;
- Shilts, Meghan H;
- Martin, Karen;
- Como-Sabetti, Kathryn;
- Strain, Anna K;
- Ferrieri, Patricia;
- Lynfield, Ruth
Publication type:
journal article
Differences in the Nasopharyngeal Microbiome During Acute Respiratory Tract Infection With Human Rhinovirus and Respiratory Syncytial Virus in Infancy.
Published in:
2016
By:
- Rosas-Salazar, Christian;
- Shilts3,4,6, Meghan H.;
- Tovchigrechko, Andrey;
- Schobel, Seth;
- Chappell, James D.;
- Larkin, Emma K.;
- Shankar, Jyoti;
- Yooseph, Shibu;
- Nelson, Karen E.;
- Halpin, Rebecca A.;
- Moore, Martin L.;
- Anderson, Larry J.;
- Stokes Peebles Jr, R.;
- Das, Suman R.;
- Hartert, Tina V.;
- Shilts, Meghan H;
- Peebles, R Stokes Jr
Publication type:
journal article

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