Works by Shichino, Yuichi

Results: 19

Translational regulation enhances distinction of cell types in the nervous system.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.90713

By:

Toshiharu Ichinose;
Shu Kondo;
Mai Kanno;
Yuichi Shichino;
Mari Mito;
Shintaro Iwasaki;
Hiromu Tanimoto

Publication type:

Article

Girolline is a sequence context-selective modulator of eIF5A activity.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-024-54838-2

By:

Schneider-Poetsch, Tilman;
Dang, Yongjun;
Iwasaki, Wakana;
Arata, Mayumi;
Shichino, Yuichi;
Al Mourabit, Ali;
Moriou, Celine;
Romo, Daniel;
Liu, Jun O.;
Ito, Takuhiro;
Iwasaki, Shintaro;
Yoshida, Minoru

Publication type:

Article

DMDA-PatA mediates RNA sequence-selective translation repression by anchoring eIF4A and DDX3 to GNG motifs.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-51635-9

By:

Saito, Hironori;
Handa, Yuma;
Chen, Mingming;
Schneider-Poetsch, Tilman;
Shichino, Yuichi;
Takahashi, Mari;
Romo, Daniel;
Yoshida, Minoru;
Fürstner, Alois;
Ito, Takuhiro;
Fukuzawa, Kaori;
Iwasaki, Shintaro

Publication type:

Article

Calibrated ribosome profiling assesses the dynamics of ribosomal flux on transcripts.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-51258-0

By:

Tomuro, Kotaro;
Mito, Mari;
Toh, Hirotaka;
Kawamoto, Naohiro;
Miyake, Takahito;
Chow, Siu Yu A.;
Doi, Masao;
Ikeuchi, Yoshiho;
Shichino, Yuichi;
Iwasaki, Shintaro

Publication type:

Article

Selective translation of epigenetic modifiers affects the temporal pattern and differentiation of neural stem cells.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28097-y

By:

Wu, Quan;
Shichino, Yuichi;
Abe, Takaya;
Suetsugu, Taeko;
Omori, Ayaka;
Kiyonari, Hiroshi;
Iwasaki, Shintaro;
Matsuzaki, Fumio

Publication type:

Article

eIF2B-capturing viral protein NSs suppresses the integrated stress response.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-27337-x

By:

Kashiwagi, Kazuhiro;
Shichino, Yuichi;
Osaki, Tatsuya;
Sakamoto, Ayako;
Nishimoto, Madoka;
Takahashi, Mari;
Mito, Mari;
Weber, Friedemann;
Ikeuchi, Yoshiho;
Iwasaki, Shintaro;
Ito, Takuhiro

Publication type:

Article

Translation of zinc finger domains induces ribosome collision and Znf598-dependent mRNA decay in zebrafish.

Published in:

PLoS Biology, 2024, v. 22, n. 12, p. 1, doi. 10.1371/journal.pbio.3002887

By:

Ishibashi, Kota;
Shichino, Yuichi;
Han, Peixun;
Wakabayashi, Kimi;
Mito, Mari;
Inada, Toshifumi;
Kimura, Seisuke;
Iwasaki, Shintaro;
Mishima, Yuichiro

Publication type:

Article

Multifarious Translational Regulation during Replicative Aging in Yeast.

Published in:

Journal of Fungi, 2022, v. 8, n. 9, p. N.PAG, doi. 10.3390/jof8090938

By:

Zhao, Tianyu;
Chida, Asaka;
Shichino, Yuichi;
Choi, Dongwoo;
Mizunuma, Masaki;
Iwasaki, Shintaro;
Ohya, Yoshikazu

Publication type:

Article

Selective translation of epigenetic modifiers affects the temporal pattern and differentiation of neural stem cells.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28097-y

By:

Wu, Quan;
Shichino, Yuichi;
Abe, Takaya;
Suetsugu, Taeko;
Omori, Ayaka;
Kiyonari, Hiroshi;
Iwasaki, Shintaro;
Matsuzaki, Fumio

Publication type:

Article

Selective termination of lnc RNA transcription promotes heterochromatin silencing and cell differentiation.

Published in:

EMBO Journal, 2017, v. 36, n. 17, p. 2626, doi. 10.15252/embj.201796571

By:

Touat‐Todeschini, Leila;
Shichino, Yuichi;
Dangin, Mathieu;
Thierry‐Mieg, Nicolas;
Gilquin, Benoit;
Hiriart, Edwige;
Sachidanandam, Ravi;
Lambert, Emeline;
Brettschneider, Janine;
Reuter, Michael;
Kadlec, Jan;
Pillai, Ramesh;
Yamashita, Akira;
Yamamoto, Masayuki;
Verdel, André

Publication type:

Article

dCas13-mediated translational repression for accurate gene silencing in mammalian cells.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-46412-7

By:

Apostolopoulos, Antonios;
Kawamoto, Naohiro;
Chow, Siu Yu A.;
Tsuiji, Hitomi;
Ikeuchi, Yoshiho;
Shichino, Yuichi;
Iwasaki, Shintaro

Publication type:

Article

Translation variation across genetic backgrounds reveals a post-transcriptional buffering signature in yeast.

Published in:

Nucleic Acids Research, 2024, v. 52, n. 5, p. 2434, doi. 10.1093/nar/gkae030

By:

Teyssonniere, Elie M;
Shichino, Yuichi;
Mito, Mari;
Friedrich, Anne;
Iwasaki, Shintaro;
Schacherer, Joseph

Publication type:

Article

Combinatorial analysis of translation dynamics reveals eIF2 dependence of translation initiation at near-cognate codons.

Published in:

Nucleic Acids Research, 2021, v. 49, n. 13, p. 7298, doi. 10.1093/nar/gkab549

By:

Ichihara, Kazuya;
Matsumoto, Akinobu;
Nishida, Hiroshi;
Kito, Yuki;
Shimizu, Hideyuki;
Shichino, Yuichi;
Iwasaki, Shintaro;
Imami, Koshi;
Ishihama, Yasushi;
Nakayama, Keiichi I

Publication type:

Article

Mmi1 RNA surveillance machinery directs RNAi complex RITS to specific meiotic genes in fission yeast.

Published in:

EMBO Journal, 2012, v. 31, n. 10, p. 2296, doi. 10.1038/emboj.2012.105

By:

Hiriart, Edwige;
Vavasseur, Aurélia;
Touat-Todeschini, Leila;
Yamashita, Akira;
Gilquin, Benoit;
Lambert, Emeline;
Perot, Jonathan;
Shichino, Yuichi;
Nazaret, Nicolas;
Boyault, Cyril;
Lachuer, Joel;
Perazza, Daniel;
Yamamoto, Masayuki;
Verdel, André

Publication type:

Article

Meiotic gene silencing complex MTREC/NURS recruits the nuclear exosome to YTH-RNA-binding protein Mmi1.

Published in:

PLoS Genetics, 2020, v. 16, n. 2, p. 1, doi. 10.1371/journal.pgen.1008598

By:

Shichino, Yuichi;
Otsubo, Yoko;
Yamamoto, Masayuki;
Yamashita, Akira

Publication type:

Article

A parasitic fungus employs mutated eIF4A to survive on rocaglate-synthesizing Aglaia plants.

Published in:

eLife, 2023, p. 1, doi. 10.7554/eLife.81302

By:

Mingming Chen;
Naoyoshi Kumakura;
Hironori Saito;
Muller, Ryan;
Madoka Nishimoto;
Mito, Mari;
Gan, Pamela;
Ingolia, Nicholas T.;
Shirasu, Ken;
Takuhiro Ito;
Yuichi Shichino;
Shintaro Iwasaki

Publication type:

Article

N-terminal deletion of Swi3 created by the deletion of a dubious ORF YJL175W mitigates protein burden effect in S. cerevisiae.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-66307-z

By:

Saeki, Nozomu;
Eguchi, Yuichi;
Kintaka, Reiko;
Makanae, Koji;
Shichino, Yuichi;
Iwasaki, Shintaro;
Kanno, Manabu;
Kimura, Nobutada;
Moriya, Hisao

Publication type:

Article

YTH-RNA-binding protein prevents deleterious expression of meiotic proteins by tethering their mRNAs to nuclear foci.

Published in:

eLife, 2018, p. 1, doi. 10.7554/eLife.32155

By:

Yuichi Shichino;
Yoko Otsubo;
Yoshitaka Kimori;
Masayuki Yamamoto;
Akira Yamashita

Publication type:

Article

Codon bias confers stability to human mRNAs.

Published in:

EMBO Reports, 2019, v. 20, n. 11, p. N.PAG, doi. 10.15252/embr.201948220

By:

Hia, Fabian;
Yang, Sheng Fan;
Shichino, Yuichi;
Yoshinaga, Masanori;
Murakawa, Yasuhiro;
Vandenbon, Alexis;
Fukao, Akira;
Fujiwara, Toshinobu;
Landthaler, Markus;
Natsume, Tohru;
Adachi, Shungo;
Iwasaki, Shintaro;
Takeuchi, Osamu

Publication type:

Article