Works by Shi, Xinrui

Results: 37

Nitrification inhibitor shifts the composition of soil microbial communities and increases N utilization potentials in wheat soil under elevated CO2 concentration.

Published in:

Plant & Soil, 2025, v. 511, n. 1, p. 135, doi. 10.1007/s11104-024-06977-0

By:

Yang, Jing;
Lai, Xiaxuan;
Wang, Yan;
Guo, Lifeng;
Zong, Yuzheng;
Zhang, Dongsheng;
Shi, Xinrui;
Hao, Xingyu;
Li, Ping

Publication type:

Article

Human A-to-I RNA editing SNP loci are enriched in GWAS signals for autoimmune diseases and under balancing selection.

Published in:

Genome Biology, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s13059-020-02205-x

By:

Zhang, Hui;
Fu, Qiang;
Shi, Xinrui;
Pan, Ziqing;
Yang, Wenbing;
Huang, Zichao;
Tang, Tian;
He, Xionglei;
Zhang, Rui

Publication type:

Article

The effect of anxiety, depression, and structural social capital on life satisfaction among people with hearing disabilities: a cross-sectional study in Shanghai, China.

Published in:

Frontiers in Psychiatry, 2023, p. 1, doi. 10.3389/fpsyt.2023.1164324

By:

Xiaomin Wei;
Ting Wang;
Yuxin Zhang;
Nan Jiang;
Quqing Wang;
He Cao;
Xinrui Shi;
Jiwei Wang

Publication type:

Article

Elevated CO2 Concentration Enhances Drought Tolerance by Mitigating Oxidative Stress and Enhancing Carbon Assimilation in Foxtail Millet (Setaria italica).

Published in:

Journal of Agronomy & Crop Science, 2024, v. 210, n. 6, p. 1, doi. 10.1111/jac.12778

By:

Zhang, Xiaoqin;
Duan, Yuqian;
Xing, Qijun;
Duan, Ruonan;
Shen, Jie;
Zong, Yuzheng;
Zhang, Dongsheng;
Shi, Xinrui;
Li, Ping;
Hao, Xingyu

Publication type:

Article

Functional heritage: the evolution of chimeric RNA into a gene.

Published in:

RNA Biology, 2020, v. 17, n. 1, p. 125, doi. 10.1080/15476286.2019.1670038

By:

Wu, Hao;
Singh, Sandeep;
Shi, Xinrui;
Xie, Zhongqiu;
Lin, Emily;
Li, Xiaorong;
Li, Hui

Publication type:

Article

Effects of Nitrification Inhibitors on Soybean Soil Inorganic Nitrogen and N2O Emissions under Elevated Atmospheric CO2 Concentration and Temperature.

Published in:

Journal of Laser Biology / Acta Laser Biology Sinica, 2022, v. 31, n. 6, p. 559, doi. 10.3969/j.issn.1007-7146.2022.06.011

By:

LI Chao;
HAO Xingyu;
LI Ping;
ZONG Yuzheng;
ZHANG Dongsheng;
SHI Xinrui

Publication type:

Article

Comparative Genomic and Pan-Genomic Characterization of Staphylococcus epidermidis From Different Sources Unveils the Molecular Basis and Potential Biomarkers of Pathogenic Strains.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.770191

By:

Lin, Shudan;
Sun, Bianjin;
Shi, Xinrui;
Xu, Yi;
Gu, Yunfeng;
Gu, Xiaobin;
Ma, Xueli;
Wan, Tian;
Xu, Jie;
Su, Jianzhong;
Lou, Yongliang;
Zheng, Meiqin

Publication type:

Article

RTCpredictor: identification of read-through chimeric RNAs from RNA sequencing data.

Published in:

Briefings in Bioinformatics, 2024, v. 25, n. 4, p. 1, doi. 10.1093/bib/bbae251

By:

Singh, Sandeep;
Shi, Xinrui;
Haddox, Samuel;
Elfman, Justin;
Ahmad, Syed Basil;
Lynch, Sarah;
Manley, Tommy;
Piczak, Claire;
Phung, Christopher;
Sun, Yunan;
Sharma, Aadi;
Li, Hui

Publication type:

Article

Investigation of interfacial adsorption between microplastics and methylparaben in aqueous solution.

Published in:

Environmental Geochemistry & Health, 2023, v. 45, n. 5, p. 1695, doi. 10.1007/s10653-022-01284-y

By:

Chen, Bingyu;
Wang, Zhimin;
Chen, Ziwei;
Zhuang, Meiyu;
Zhu, Kaifa;
Shi, Xinrui;
Shi, Yingnan;
Qin, Ying;
Zhu, Shuguang;
Yu, Tao;
Liu, Yuan

Publication type:

Article

Association of maternal mineral status with the risk of preterm birth: a retrospective cohort study.

Published in:

Frontiers in Nutrition, 2024, p. 1, doi. 10.3389/fnut.2024.1329720

By:

Sumiao Hong;
Nan Jiang;
Guankai Lin;
Quqing Wang;
Xiaoyang Xu;
Xinrui Shi;
You Zhou;
Xiaoting Wen;
Baochang Sun;
Hexing Wang;
Min Huang;
Jiwei Wang;
Na Wang;
Yue Chen;
Qingwu Jiang

Publication type:

Article

Effect of Glycolipids Application Combined with Nitrogen Fertilizer Reduction on Maize Nitrogen Use Efficiency and Yield.

Published in:

Plants (2223-7747), 2024, v. 13, n. 9, p. 1222, doi. 10.3390/plants13091222

By:

Meng, Xianghai;
Dong, Qingshan;
Wang, Baicheng;
Ni, Zheng;
Zhang, Xingzhe;
Liu, Chunguang;
Yu, Wenquan;
Liu, Jie;
Shi, Xinrui;
Xu, Dehai;
Duan, Yan

Publication type:

Article

Profile of chimeric RNAs and TMPRSS2-ERG e2e4 isoform in neuroendocrine prostate cancer.

Published in:

Cell & Bioscience, 2022, v. 12, n. 1, p. 1, doi. 10.1186/s13578-022-00893-5

By:

Wang, Qiong;
Chen, Junxiu;
Singh, Sandeep;
Xie, Zhongqiu;
Qin, Fujun;
Shi, Xinrui;
Cornelison, Robert;
Li, Hui;
Huang, Hai

Publication type:

Article

Serum Exosomes MicroRNAs Are Novel Non-Invasive Biomarkers of Intrahepatic Cholestasis of Pregnancy.

Published in:

Frontiers in Endocrinology, 2022, v. 13, p. 1, doi. 10.3389/fendo.2022.832577

By:

Dong, Ruirui;
Ye, Ningzhen;
Wang, Jing;
Zhao, Shaojie;
Wang, Tiejun;
Wang, Gaoying;
Shi, Xinrui;
Cheng, Jing;
Zhang, Yan;
Yao, Tingting;
Chen, Minjian;
Zhang, Ting;
Luo, Liang

Publication type:

Article

Construction of the panoptosis-related gene model and characterization of tumor microenvironment infiltration in hepatocellular carcinoma.

Published in:

Oncology Research, 2023, v. 31, n. 4, p. 569, doi. 10.32604/or.2023.028964

By:

XINRUI SHI;
XIA GAO;
WENCONG LIU;
XUEJIAO TANG;
JIAYI LIU;
DONGCHEN PAN;
XUEQING DUAN;
YUQING JIN;
WEIYAN REN;
LEI YANG;
WENXUAN LIU

Publication type:

Article

Exosomes from Intrahepatic Cholestasis of Pregnancy Induce Cell Apoptosis Through the miRNA-6891-5p/YWHAE Pathway.

Published in:

Digestive Diseases & Sciences, 2024, v. 69, n. 4, p. 1253, doi. 10.1007/s10620-023-08265-w

By:

Ye, Ningzhen;
Shi, Xinrui;
Gao, Jianyi;
Dong, Ruirui;
Wang, Gaoying;
Wang, Jing;
Luo, Liang;
Zhang, Ting

Publication type:

Article

Coupling life cycle assessment and global sensitivity analysis to evaluate the uncertainty and key processes associated with carbon footprint of rice production in Eastern China.

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.990105

By:

Qiang Xu;
Jingyong Li;
Hao Liang;
Zhao Ding;
Xinrui Shi;
Yinglong Chen;
Zhi Dou;
Qigen Dai;
Hui Gao

Publication type:

Article

Elevated CO2 Concentration Extends Reproductive Growth Period and Enhances Carbon Metabolism in Wheat Exposed to Increased Temperature.

Published in:

Plant, Cell & Environment, 2025, v. 48, n. 2, p. 1452, doi. 10.1111/pce.15243

By:

Wang, Jiao;
Han, Yuyan;
Li, Hongyan;
Bai, Haixia;
Liang, Hui;
Zong, Yuzheng;
Zhang, Dongsheng;
Shi, Xinrui;
Li, Ping;
Hao, Xingyu

Publication type:

Article

An optimistic future of C4 crop broomcorn millet (Panicum miliaceum L.) for food security under increasing atmospheric CO2 concentrations.

Published in:

PeerJ, 2022, p. 1, doi. 10.7717/peerj.14024

By:

Xinrui Shi;
Jie Shen;
Bingjie Niu;
Shu Kee Lam;
Yuzheng Zong;
Dongsheng Zhang;
Xingyu Hao;
Ping Li

Publication type:

Article

Identification of INHBA as a potential biomarker for gastric cancer through a comprehensive analysis.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-39784-1

By:

Liu, Fang;
Liu, Jiayi;
Shi, Xinrui;
Hu, Xiaojie;
Wei, Lai;
Huo, Bingjie;
Chang, Liang;
Han, Yaqing;
Liu, Guangjie;
Yang, Lei

Publication type:

Article

Dynamic landscape and evolution of m6A methylation in human.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 11, p. 6251, doi. 10.1093/nar/gkaa347

By:

Zhang, Hui;
Shi, Xinrui;
Huang, Tao;
Zhao, Xueni;
Chen, Wanying;
Gu, Nannan;
Zhang, Rui

Publication type:

Article

Conducting polymer functionalized Cu-metal organic framework–based electrochemical immunosensor for rapid and sensitive quantitation of Escherichia coli O157:H7.

Published in:

Microchimica Acta, 2024, v. 191, n. 12, p. 1, doi. 10.1007/s00604-024-06807-1

By:

Duan, Xiaoge;
Shi, Xinrui;
He, Zhaoyuan;
Chen, Hongcai;
Shi, Zhuanzhuan;
Zhao, Zhi;
Chen, Hailan;
Yu, Meiling;
Guo, Chunxian

Publication type:

Article

Gold nanoparticle dimer–based immunochromatography for in situ ultrasensitive detection of porcine epidemic diarrhea virus.

Published in:

Microchimica Acta, 2023, v. 190, n. 11, p. 1, doi. 10.1007/s00604-023-06013-5

By:

Shi, Xinrui;
Luo, Yaxiang;
Yan, Hao;
Tian, Guangzhao;
Yang, Songxin;
He, Zhaoyuan;
Zhang, Fuxin;
Wang, Yueliang;
Guo, Longhua;
Chen, Hailan

Publication type:

Article

MPINet: metabolite pathway identification via coupling of global metabolite network structure and metabolomic profile.

Published in:

2014

By:

Li, Feng;
Xu, Yanjun;
Shang, Desi;
Yang, Haixiu;
Liu, Wei;
Han, Junwei;
Sun, Zeguo;
Yao, Qianlan;
Zhang, Chunlong;
Ma, Jiquan;
Su, Fei;
Feng, Li;
Shi, Xinrui;
Zhang, Yunpeng;
Li, Jing;
Gu, Qi;
Li, Xia;
Li, Chunquan

Publication type:

journal article

The transcriptional landscape and clinico‐biological characterization of human endogenous retroviruses in esophageal squamous cell carcinoma.

Published in:

International Journal of Cancer, 2025, v. 156, n. 3, p. 668, doi. 10.1002/ijc.35147

By:

Shi, Xinrui;
Lu, Minyi;
Li, Xukun;
Li, Jiaqi;
Bao, Siqi;
Jia, Caifeng;
Chen, Hongyan;
Zhou, Meng

Publication type:

Article

A cytoskeleton regulator AVIL drives tumorigenesis in glioblastoma.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-17279-1

By:

Xie, Zhongqiu;
Janczyk, Pawel Ł.;
Zhang, Ying;
Liu, Aiqun;
Shi, Xinrui;
Singh, Sandeep;
Facemire, Loryn;
Kubow, Kristopher;
Li, Zi;
Jia, Yuemeng;
Schafer, Dorothy;
Mandell, James W.;
Abounader, Roger;
Li, Hui

Publication type:

Article

Identification and validation of potential hypoxia-related genes associated with coronary artery disease.

Published in:

Frontiers in Physiology, 2023, p. 01, doi. 10.3389/fphys.2023.1181510

By:

Yuqing Jin;
Weiyan Ren;
Jiayi Liu;
Xuejiao Tang;
Xinrui Shi;
Dongchen Pan;
Lianguo Hou;
Lei Yang

Publication type:

Article

Roles of non‐coding RNAs in eye development and diseases.

Published in:

Wiley Interdisciplinary Reviews: RNA, 2023, v. 14, n. 5, p. 1, doi. 10.1002/wrna.1785

By:

Shi, Xinrui;
Xue, Zhengbo;
Ye, Kaicheng;
Yuan, Jian;
Zhang, Yan;
Qu, Jia;
Su, Jianzhong

Publication type:

Article

TRanscranial AlterNating current stimulation FOR patients with mild Alzheimer's Disease (TRANSFORM-AD): a randomized controlled clinical trial.

Published in:

Alzheimer's Research & Therapy, 2024, v. 16, n. 1, p. 1, doi. 10.1186/s13195-024-01570-0

By:

Tang, Yi;
Xing, Yi;
Sun, Liwei;
Wang, Zhibin;
Wang, Changming;
Yang, Kun;
Zhu, Wei;
Shi, Xinrui;
Xie, Beijia;
Yin, Yunsi;
Mi, Yingxin;
Wei, Tao;
Tong, Renjie;
Qiao, Yuchen;
Yan, Shaozhen;
Wei, Penghu;
Yang, Yanfeng;
Shan, Yongzhi;
Zhang, Xu;
Jia, Jianping

Publication type:

Article

A protein-encoding CCDC7 circular RNA inhibits the progression of prostate cancer by up-regulating FLRT3.

Published in:

NPJ Precision Oncology, 2024, v. 8, n. 1, p. 1, doi. 10.1038/s41698-024-00503-2

By:

Wang, Qiong;
Cheng, Bisheng;
Singh, Sandeep;
Tao, Yiran;
Xie, Zhongqiu;
Qin, Fujun;
Shi, Xinrui;
Xu, Jingjing;
Hu, Chenxi;
Tan, Wanlong;
Li, Hui;
Huang, Hai

Publication type:

Article

TRanscranial AlterNating current Stimulation FOR patients with Mild Alzheimer's Disease (TRANSFORM-AD study): Protocol for a randomized controlled clinical trial.

Published in:

Alzheimer's & Dementia: Translational Research & Clinical Interventions, 2020, v. 6, n. 1, p. 1, doi. 10.1002/trc2.12005

By:

Yi Xing;
Penghu Wei;
Changming Wang;
Yi Shan;
Yueying Yu;
Yuchen Qiao;
Beijia Xie;
Xinrui Shi;
Zhongfang Zhu;
Jie Lu;
Guoguang Zhao;
Jianping Jia;
Yi Tang

Publication type:

Article

Effects of controlled-release fertilizer on N2O emissions in wheat under elevated CO2 concentration and temperature.

Published in:

Plant & Soil, 2023, v. 488, n. 1/2, p. 343, doi. 10.1007/s11104-023-05972-1

By:

Liu, Qi;
Liu, Yajing;
Hao, Xingyu;
Song, Chunxu;
Zong, Yuzheng;
Zhang, Dongsheng;
Shi, Xinrui;
Li, Ping

Publication type:

Article

Association between atherosclerosis and Alzheimer's disease: A systematic review and meta‐analysis.

Published in:

Brain & Behavior, 2020, v. 10, n. 4, p. 1, doi. 10.1002/brb3.1601

By:

Xie, Beijia;
Shi, Xinrui;
Xing, Yi;
Tang, Yi

Publication type:

Article

Decoupling Aromatic Yield and Coke Formation in Methanol‐to‐Aromatic Reaction on Zn(II) Exchanged H‐ZSM‐5 Zeolite.

Published in:

ChemCatChem, 2024, v. 16, n. 20, p. 1, doi. 10.1002/cctc.202400810

By:

Shang, Yihao;
Gao, Zhiwen;
Zhang, Min;
Shi, Xinrui;
Fang, Shuhui;
Yuan, Lei;
Zhang, Wei;
Liu, Yue

Publication type:

Article

Binaural processing deficit and cognitive impairment in Alzheimer's disease.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2022, v. 18, n. 6, p. 1085, doi. 10.1002/alz.12464

By:

Wang, Changming;
Wang, Zhibin;
Xie, Beijia;
Shi, Xinrui;
Yang, Pengcheng;
Liu, Lei;
Qu, Tianshu;
Qin, Qi;
Xing, Yi;
Zhu, Wei;
Teipel, Stefan J.;
Jia, Jianping;
Zhao, Guoguang;
Li, Liang;
Tang, Yi

Publication type:

Article

Impairment of auditory integration in subjective cognitive decline, amnestic mild cognitive impairment, and Alzheimer's disease.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2021, v. 17, p. 1, doi. 10.1002/alz.050625

By:

Wang, Changming;
Wang, Zhibin;
Liu, Lei;
Yang, Pengcheng;
Xie, Beijia;
Shi, Xinrui;
Jia, Jianping;
Li, Liang;
Tang, Yi

Publication type:

Article

Global Prioritization of Disease Candidate Metabolites Based on a Multi-omics Composite Network.

Published in:

Scientific Reports, 2015, p. 17201, doi. 10.1038/srep17201

By:

Yao, Qianlan;
Xu, Yanjun;
Yang, Haixiu;
Shang, Desi;
Zhang, Chunlong;
Zhang, Yunpeng;
Sun, Zeguo;
Shi, Xinrui;
Feng, Li;
Han, Junwei;
Su, Fei;
Li, Chunquan;
Li, Xia

Publication type:

Article

ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis.

Published in:

Scientific Reports, 2015, p. 13044, doi. 10.1038/srep13044

By:

Han, Junwei;
Shi, Xinrui;
Zhang, Yunpeng;
Xu, Yanjun;
Jiang, Ying;
Zhang, Chunlong;
Feng, Li;
Yang, Haixiu;
Shang, Desi;
Sun, Zeguo;
Su, Fei;
Li, Chunquan;
Li, Xia

Publication type:

Article

Works by Shi, Xinrui

Nitrification inhibitor shifts the composition of soil microbial communities and increases N utilization potentials in wheat soil under elevated CO<sub>2</sub> concentration.

Human A-to-I RNA editing SNP loci are enriched in GWAS signals for autoimmune diseases and under balancing selection.

The effect of anxiety, depression, and structural social capital on life satisfaction among people with hearing disabilities: a cross-sectional study in Shanghai, China.

Elevated CO<sub>2</sub> Concentration Enhances Drought Tolerance by Mitigating Oxidative Stress and Enhancing Carbon Assimilation in Foxtail Millet (Setaria italica).

Functional heritage: the evolution of chimeric RNA into a gene.

Effects of Nitrification Inhibitors on Soybean Soil Inorganic Nitrogen and N<sub>2</sub>O Emissions under Elevated Atmospheric CO<sub>2</sub> Concentration and Temperature.

Comparative Genomic and Pan-Genomic Characterization of Staphylococcus epidermidis From Different Sources Unveils the Molecular Basis and Potential Biomarkers of Pathogenic Strains.

RTCpredictor: identification of read-through chimeric RNAs from RNA sequencing data.

Investigation of interfacial adsorption between microplastics and methylparaben in aqueous solution.

Association of maternal mineral status with the risk of preterm birth: a retrospective cohort study.

Effect of Glycolipids Application Combined with Nitrogen Fertilizer Reduction on Maize Nitrogen Use Efficiency and Yield.

Profile of chimeric RNAs and TMPRSS2-ERG e2e4 isoform in neuroendocrine prostate cancer.

Serum Exosomes MicroRNAs Are Novel Non-Invasive Biomarkers of Intrahepatic Cholestasis of Pregnancy.

Construction of the panoptosis-related gene model and characterization of tumor microenvironment infiltration in hepatocellular carcinoma.

Exosomes from Intrahepatic Cholestasis of Pregnancy Induce Cell Apoptosis Through the miRNA-6891-5p/YWHAE Pathway.

Coupling life cycle assessment and global sensitivity analysis to evaluate the uncertainty and key processes associated with carbon footprint of rice production in Eastern China.

Elevated CO<sub>2</sub> Concentration Extends Reproductive Growth Period and Enhances Carbon Metabolism in Wheat Exposed to Increased Temperature.

An optimistic future of C<sub>4</sub> crop broomcorn millet (Panicum miliaceum L.) for food security under increasing atmospheric CO<sub>2</sub> concentrations.

Identification of INHBA as a potential biomarker for gastric cancer through a comprehensive analysis.

Dynamic landscape and evolution of m<sup>6</sup>A methylation in human.

Conducting polymer functionalized Cu-metal organic framework–based electrochemical immunosensor for rapid and sensitive quantitation of Escherichia coli O157:H7.

Gold nanoparticle dimer–based immunochromatography for in situ ultrasensitive detection of porcine epidemic diarrhea virus.

MPINet: metabolite pathway identification via coupling of global metabolite network structure and metabolomic profile.

The transcriptional landscape and clinico‐biological characterization of human endogenous retroviruses in esophageal squamous cell carcinoma.

A cytoskeleton regulator AVIL drives tumorigenesis in glioblastoma.

Identification and validation of potential hypoxia-related genes associated with coronary artery disease.

Roles of non‐coding RNAs in eye development and diseases.

TRanscranial AlterNating current stimulation FOR patients with mild Alzheimer's Disease (TRANSFORM-AD): a randomized controlled clinical trial.

A protein-encoding CCDC7 circular RNA inhibits the progression of prostate cancer by up-regulating FLRT3.

TRanscranial AlterNating current Stimulation FOR patients with Mild Alzheimer's Disease (TRANSFORM-AD study): Protocol for a randomized controlled clinical trial.

Effects of controlled-release fertilizer on N<sub>2</sub>O emissions in wheat under elevated CO<sub>2</sub> concentration and temperature.

Association between atherosclerosis and Alzheimer's disease: A systematic review and meta‐analysis.

Decoupling Aromatic Yield and Coke Formation in Methanol‐to‐Aromatic Reaction on Zn(II) Exchanged H‐ZSM‐5 Zeolite.

Binaural processing deficit and cognitive impairment in Alzheimer's disease.

Impairment of auditory integration in subjective cognitive decline, amnestic mild cognitive impairment, and Alzheimer's disease.

Global Prioritization of Disease Candidate Metabolites Based on a Multi-omics Composite Network.

ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis.